CB250245

Overview
NameCB250245
Unique NameCB250245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP72_RAT (Heat shock-related 70 kDa protein 2 OS=Rattus norvegicus GN=Hspa2 PE=2 SV=2)

HSP 1 Score: 321.242 bits (822), Expect = 3.299e-87
Identity = 162/235 (68.94%), Postives = 183/235 (77.87%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            RMV+H  +EFKRK+KKDI  N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK  Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKFD +GIPPAPRG
Sbjct:  239 RMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRG 473          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP72_MOUSE (Heat shock-related 70 kDa protein 2 OS=Mus musculus GN=Hspa2 PE=1 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 3.299e-87
Identity = 162/235 (68.94%), Postives = 183/235 (77.87%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            RMV+H  +EFKRK+KKDI  N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK  Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKFD +GIPPAPRG
Sbjct:  239 RMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRG 473          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 3.299e-87
Identity = 162/235 (68.94%), Postives = 183/235 (77.87%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            RMV+H  +EFKRK+KKDI  N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK  Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKFD +GIPPAPRG
Sbjct:  239 RMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRG 473          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 320.857 bits (821), Expect = 4.309e-87
Identity = 162/236 (68.64%), Postives = 190/236 (80.51%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNHFVQEFKRK+KKD+S N RALRRLRTACERAKRTLSS+AQT+IEIDSL+EGIDFYT+ITRARFEEL  DLFR  ++PV++ L DAK+DKS VH++VLVGGSTRIP++Q+L+ D+FNGKE  KSINPDE           ILSG+ + K   +             ETAGG+MT LIPRNTTIPTK  +VFST+SDNQPGVLIQVYEGER RT+DNNLLGKF+ +GIPPAPRG
Sbjct:  234 RLVNHFVQEFKRKHKKDLSTNARALRRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFYTSITRARFEELCQDLFRSTLQPVDRVLTDAKIDKSQVHEIVLVGGSTRIPRIQKLISDYFNGKEPNKSINPDEAVAYGAAVQAAILSGDTSSKSTSEILLLDVAPLSLGIETAGGMMTKLIPRNTTIPTKKSEVFSTFSDNQPGVLIQVYEGERQRTKDNNLLGKFELTGIPPAPRG 469          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 7.350e-87
Identity = 163/235 (69.36%), Postives = 188/235 (80.00%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VN FV EFKRK KKD++ N R+LRRLRTACERAKRTLSS  QTT+EIDSL +GID+Y +ITRA+FEEL MDLFR   EPVEK LRD+K+ KS +HDVVLVGGSTRIPKVQQLL D+FNGKELCK+INPDE           IL+G+ +EK+ D             ETAGGVMTVLI RNTTIPTK  QVFSTY+DNQPGVLIQV+EGER+RT+DNN+LGKF+ +GIPPAPRG
Sbjct:  243 RLVNFFVSEFKRKYKKDVTSNARSLRRLRTACERAKRTLSSGTQTTVEIDSLIDGIDYYASITRAKFEELCMDLFRGTSEPVEKVLRDSKISKSEIHDVVLVGGSTRIPKVQQLLIDYFNGKELCKNINPDEAVAYGAAVQAAILAGDTSEKM-DLLLLDVSPLSLGLETAGGVMTVLIKRNTTIPTKKTQVFSTYADNQPGVLIQVFEGERSRTKDNNILGKFELTGIPPAPRG 476          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 9.600e-87
Identity = 161/234 (68.80%), Postives = 183/234 (78.21%), Query Frame = 3
Query:    6 MVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            MV+H  +EFKRK+KKDI+ N RA+RRLRTACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK  Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKFD +GIPPAPRG
Sbjct:  240 MVSHLAEEFKRKHKKDIAPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRG 473          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 9.600e-87
Identity = 161/235 (68.51%), Postives = 184/235 (78.30%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            RMVN FV+EFK K+K+D +GN RA+RRLRTACERA+RTLSS+ Q +IEIDSL+EGIDFYT+ITRARFEELN DLFR  +EPVEK LRDAK+DK  + ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD             ETAGGVMT LI RNTTIPTK  Q F+TYSDNQ  VL+QVYEGER  T+DNNLLGKFD +GIPPAPRG
Sbjct:  239 RMVNRFVEEFKGKHKRDNAGNKRAVRRLRTACERARRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRG 473          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_ONCVO (Heat shock 70 kDa protein (Fragment) OS=Onchocerca volvulus PE=2 SV=2)

HSP 1 Score: 318.546 bits (815), Expect = 2.139e-86
Identity = 163/227 (71.81%), Postives = 180/227 (79.30%), Query Frame = 3
Query:   27 EFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            EFKR +KKD++ NPRALRRLRTACERAKRTLSS++Q +IEIDSL+EGIDFYT ITRARFEEL  DLFR  M+PVEK LR AKMDK+ VHD+VLVGGSTRIPKVQ+LL DFF+GKEL KSINPDE           ILSG+ +E VQD             ETAGGVMT LI RNTTIPTK  Q F+TYSDNQPGVLIQVYEGER  T+DNNLLGKF+ SGIPPAPRG
Sbjct:    1 EFKRNDKKDLASNPRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALRVAKMDKAQVHDIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRG 227          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 4.764e-86
Identity = 165/236 (69.92%), Postives = 187/236 (79.24%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNHFV EFKRK+KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSL+EGIDFYT+ITRARFEEL  DLFR  MEPVE+ LRDAK+DKSSVH++VLVGGSTRIPK+Q+L+ D+FN KE  KSINPDE           ILSG+ + K   +             ETAGGVMT L+ RNTTIPTK  + FSTYSDNQPGVLIQVYEGER RT+DNNLLGKF+ +GIPPAPRG
Sbjct:  234 RLVNHFVTEFKRKHKKDLSTNARALRRLRTACERAKRTLSSAAQTSIEIDSLFEGIDFYTSITRARFEELCQDLFRGTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPKIQRLVSDYFN-KEANKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSVGIETAGGVMTPLVKRNTTIPTKKSETFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRG 468          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 4.764e-86
Identity = 162/233 (69.53%), Postives = 186/233 (79.83%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAP 701
            R+VNHFVQEFKRK+KKD+SG  R  RRLRTACERAKRTLSS+AQT+IEIDSL+EGIDFYT+ITRARFEEL  DLFR  ++PVEK LRDAKM K+ VH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           IL+G+ +EKVQD             ETAGGVMT LI RNTTIP K  + FSTY+DNQPGVLIQVYEGER RT+DNNLLGKF+ +GIPPAP
Sbjct:  240 RLVNHFVQEFKRKHKKDLSGKARP-RRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFYTSITRARFEELCADLFRSTLDPVEKVLRDAKMAKNEVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILAGDQSEKVQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPAKKSETFSTYADNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAP 471          
The following BLAST results are available for this feature:
BLAST of CB250245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_RAT3.299e-8768.94Heat shock-related 70 kDa protein 2 OS=Rattus norv... [more]
HSP72_MOUSE3.299e-8768.94Heat shock-related 70 kDa protein 2 OS=Mus musculu... [more]
HSP72_HUMAN3.299e-8768.94Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HSP70_NEUCR4.309e-8768.64Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP70_PYRSA7.350e-8769.36Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP72_BOVIN9.600e-8768.80Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP70_CHICK9.600e-8768.51Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP70_ONCVO2.139e-8671.81Heat shock 70 kDa protein (Fragment) OS=Onchocerca... [more]
HSP70_EMENI4.764e-8669.92Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP70_BLAEM4.764e-8669.53Heat shock 70 kDa protein OS=Blastocladiella emers... [more]

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Properties
Property NameValue
Genbank descriptionEST0007 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ007 similar to 70 kDa heat shock protein (acc# P27322), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250245 ID=CB250245; Name=CB250245; organism=Citrus sinensis; type=EST; length=709bp
ACAGAATGGTGAACCACTTTGTTCAAGAGTTCAAGAGGAAAAACAAGAAG
GATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACCGCCTGTGA
AAGGGCTAAGAGGACCCTGTCATCAACTGCACAGACTACAATTGAGATTG
ATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAGGGCTAGA
TTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGCCAGTGGA
GAAATGCCTGAGAGATGCTAAGATGGACAAGAGCAGTGTCCATGATGTGG
TTCTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACTGTTGCAG
GACTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTGATGAAGC
GGTTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGTGAGGGTA
ATGAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTG
GGTTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACAC
CACTATTCCAACCAAGAATGAGCAGGTGTTCTCCACATACTCTGACAACC
AGCCCGGGGTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGT
GACAACAACTTGCTTGGAAAGTTTGATCCCTCTGGCATTCCTCCTGCTCC
AAGAGGGGT
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