CB250245

Overview
NameCB250245
Unique NameCB250245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 8.127e-86
Identity = 161/234 (68.80%), Postives = 185/234 (79.06%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAP 701
            R+VNHFV EFKRK+KKD+S N RALRRLRTACERAKRTLSS AQT+IEIDSLYEGIDFYT+ITRARFEEL  DLFR  M+PVE+ LRDAK+DKSSVH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           ILSG+   K   +             ETAGGVMT LI RNTTIPTK  + FST++DNQPGVLIQV+EGER RT++NNLLGKF+ +GIPPAP
Sbjct:  233 RLVNHFVNEFKRKHKKDLSSNARALRRLRTACERAKRTLSSAAQTSIEIDSLYEGIDFYTSITRARFEELCQDLFRSTMDPVERVLRDAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDSTSKSTNEILLLDVAPLSVGIETAGGVMTPLIKRNTTIPTKKSETFSTFADNQPGVLIQVFEGERARTKENNLLGKFELTGIPPAP 466          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.386e-85
Identity = 163/232 (70.26%), Postives = 182/232 (78.45%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPA 698
            RMVNHF+ EFKRK KKDIS N RA+RRLR+ACERAKRTLSS+ Q +IEIDSLYEG+DFYT+ITRARFEELN DLFR  ++PVEK LRDAKMDK  +HD+VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           ILSG+ +E VQD             ETAGGVMTVLI RNTTIPTK  Q F+TYSDNQPGVL QVYE     T+DNNLLGKF+ +GIPPA
Sbjct:  236 RMVNHFIAEFKRKYKKDISDNKRAVRRLRSACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLDPVEKSLRDAKMDKGQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLNQVYE-VGAMTKDNNLLGKFELTGIPPA 466          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HS7C3_DICDI (Heat shock cognate 70 kDa protein 3 OS=Dictyostelium discoideum GN=DDB_G0293674 PE=3 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.386e-85
Identity = 156/235 (66.38%), Postives = 184/235 (78.30%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNHFV EFKRK+KKDI GN RALRRLRTACERAKRTLSS++Q ++EIDSLY+GIDFYT+ITRARFEEL  DLF  C+EPVEK L+D K+DK S+ ++VLVGGSTRIPKVQQL+Q+ FNGKEL KSINPDE           ILSG+ + ++ +             ET GGVMT ++PRNT IP K  Q FST++DNQ GVLIQVYEGERT T+DNNLLGKF+ +GIPPAPRG
Sbjct:  237 RLVNHFVDEFKRKHKKDIMGNQRALRRLRTACERAKRTLSSSSQASVEIDSLYDGIDFYTSITRARFEELCSDLFNNCIEPVEKVLKDCKLDKKSIDEIVLVGGSTRIPKVQQLIQNLFNGKELNKSINPDEAVAYGAAVQAAILSGDKSSRISELIFIDVAPLSLGIETVGGVMTNIVPRNTIIPCKKTQTFSTHTDNQSGVLIQVYEGERTMTKDNNLLGKFELTGIPPAPRG 471          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.810e-85
Identity = 164/236 (69.49%), Postives = 187/236 (79.24%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNHFV EFKRK+KKD++ N RALRRLRTACERAKRTLSS AQT+IEIDSL+EGIDFYT+ITRARFEEL  DLFR  MEPVE+ LRDAK+DKSSVH++VLVGGSTRIPK+Q+L+ DFFN K+  KSINPDE           ILSG+ + K   +             ETAGGVMT LI RNTTIPTK  + FSTYSDNQPGVLIQV+EGER RT+DNNLLGKF+ +GIPPAPRG
Sbjct:  104 RLVNHFVNEFKRKHKKDLTTNARALRRLRTACERAKRTLSSAAQTSIEIDSLFEGIDFYTSITRARFEELCQDLFRGTMEPVERVLRDAKIDKSSVHEIVLVGGSTRIPKIQKLVSDFFN-KDANKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPPAPRG 338          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.810e-85
Identity = 162/236 (68.64%), Postives = 184/236 (77.97%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSG-EGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V+HF  EFKRK++KD++ N RALRRLRTACERAKRTLSS+AQ  IEIDSL++GIDF +TITRARFE++  D FRK MEPVEK LRD+K+ KS VH+VVLVGGSTRIPKVQQLL DFFNGKE CKSINPDE           ILSG + +EK+QD             ETAGGVMT LI RNTT+PTK  Q FSTY+DNQPGVLIQV+EGER+ TRDNNLLGKF   GIPP PRG
Sbjct:  238 RLVDHFTAEFKRKHRKDMTQNQRALRRLRTACERAKRTLSSSAQAYIEIDSLFDGIDFNSTITRARFEDMCGDYFRKTMEPVEKVLRDSKLSKSQVHEVVLVGGSTRIPKVQQLLSDFFNGKEPCKSINPDEAVAFGATVQAAILSGNDSSEKLQDLLLLDVTPLSLGLETAGGVMTTLIQRNTTVPTKKSQTFSTYADNQPGVLIQVFEGERSMTRDNNLLGKFSLDGIPPMPRG 473          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 314.309 bits (804), Expect = 4.033e-85
Identity = 158/235 (67.23%), Postives = 186/235 (79.15%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VN   +EFKRKNKKD++ N R+LRRLRTA ERAKRTLSS+AQT+IEIDSL+EGIDFYT+ITRARFEEL  DLFR  +EPVEK L D+K+DKS + ++VLVGGSTRIPKVQ+L+ DFFNGKE  +SINPDE           IL+G+ +   QD             ETAGG+MT LIPRN+TIPTK  +VFSTY+DNQPGVLIQV+EGERTRT+DNNLLGKF+ SGIPPAPRG
Sbjct:  234 RLVNFLAEEFKRKNKKDLTTNQRSLRRLRTAAERAKRTLSSSAQTSIEIDSLFEGIDFYTSITRARFEELCADLFRSTLEPVEKVLADSKLDKSQIDEIVLVGGSTRIPKVQKLVSDFFNGKEPNRSINPDEAVAYGAAVQAAILTGDQSSTTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSEVFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRG 468          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 313.153 bits (801), Expect = 8.985e-85
Identity = 155/235 (65.96%), Postives = 185/235 (78.72%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNH   EFKRK KKDIS N R+LRRLRTA ERAKR LSS++QT+IEIDSL+EG+DFYT++TRARFEEL  DLFR  +EPVEK L+D+K+DKS + ++VLVGGSTRIPK+Q+L+ DFFNGKE  +SINPDE           IL+G+ + K QD             ETAGG+MT LIPRN+TIPTK  + FSTY+DNQPGVLIQV+EGERTRT+DNNLLGKF+ SGIPPAPRG
Sbjct:  234 RLVNHLATEFKRKTKKDISNNQRSLRRLRTAAERAKRALSSSSQTSIEIDSLFEGMDFYTSLTRARFEELCADLFRSTLEPVEKVLKDSKLDKSQIDEIVLVGGSTRIPKIQKLVSDFFNGKEPNRSINPDEAVAYGAAVQAAILTGDQSTKTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRG 468          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP74_ANOAL (Heat shock protein 70 B2 OS=Anopheles albimanus GN=HSP70B2 PE=3 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 4.459e-84
Identity = 158/235 (67.23%), Postives = 182/235 (77.45%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            RMV HFV+EFKRK+KKD+S N RALRRLRTACERAKRTLSS+ + TIEID+L +GID+YT I+RARFEEL  DLFR  ++PVEK L DAKMDKSS+HD+VLVGGSTRIPKVQ LLQ+FF GK L  SINPDE           ILSG+ ++K+QD             ETAGGVMT LI RN+ IP K  Q+FSTY+DNQPGV IQV+EGER  T+DNNLLG+FD SGIPPAPRG
Sbjct:  235 RMVGHFVEEFKRKHKKDLSKNARALRRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSDLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTQIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRG 469          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.695e-83
Identity = 160/236 (67.80%), Postives = 183/236 (77.54%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSG-EGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V+HF QEFKRK++KDI+ N RALRRLRTACERAKRTLSS+AQ  IEIDSL++GIDF +TITRARFE++  D FRK MEPV   LRDAK+ KS VH+VVLVGGSTRIPKVQQLL DFFNGKE  KSINPDE           ILSG + ++K+QD             ETAGGVMT LI RNTT+PTK  Q FSTY+DNQPGVLIQ++EGER+ TRDNNLLGKF+  GIPP PRG
Sbjct:  238 RLVDHFTQEFKRKHRKDITENQRALRRLRTACERAKRTLSSSAQAYIEIDSLFDGIDFNSTITRARFEDMCGDYFRKTMEPVAPVLRDAKLSKSQVHEVVLVGGSTRIPKVQQLLSDFFNGKEPNKSINPDEPVAYGATVQAAILSGNDSSQKLQDLLLLDVTPLSLGLETAGGVMTTLIARNTTVPTKKSQTFSTYADNQPGVLIQLFEGERSMTRDNNLLGKFNLDGIPPMPRG 473          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 3.775e-83
Identity = 159/236 (67.37%), Postives = 184/236 (77.97%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNHF  EFKRK+KKD+S N RALRRLRTACERAKRTLSS+AQT+IEIDSL+EGIDF+T+ TRARFEE+  DLFR  MEP E+ LRD K+DKSSVH++VL GGSTRIPKVQ+L+ DFFNGKE CKSINPDE           ILSG+ + K  ++             ETAGGVMT LI RNTTIPTK  + FST+SDNQPGVLIQV+EGER RT+D NL+GKF+ SGI PAPRG
Sbjct:  234 RLVNHFSNEFKRKHKKDLSDNARALRRLRTACERAKRTLSSSAQTSIEIDSLFEGIDFFTSNTRARFEEVGQDLFRGNMEPGERTLRDDKIDKSSVHEIVLGGGSTRIPKVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILSGDTSSKSTKEILLLDVAPLSLGIETAGGVMTALIKRNTTIPTKKSETFSTFSDNQPGVLIQVFEGERARTKDINLMGKFELSGIRPAPRG 469          
The following BLAST results are available for this feature:
BLAST of CB250245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP71_PARBA8.127e-8668.80Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HSP7C_ORYLA1.386e-8570.26Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HS7C3_DICDI1.386e-8566.38Heat shock cognate 70 kDa protein 3 OS=Dictyosteli... [more]
HSP70_PENCI1.810e-8569.49Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP70_ACHKL1.810e-8568.64Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
HSP74_YEAST4.033e-8567.23Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP73_YEAST8.985e-8565.96Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP74_ANOAL4.459e-8467.23Heat shock protein 70 B2 OS=Anopheles albimanus GN... [more]
HSP70_BRELC1.695e-8367.80Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP70_CLAHE3.775e-8367.37Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]

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Properties
Property NameValue
Genbank descriptionEST0007 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ007 similar to 70 kDa heat shock protein (acc# P27322), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250245 ID=CB250245; Name=CB250245; organism=Citrus sinensis; type=EST; length=709bp
ACAGAATGGTGAACCACTTTGTTCAAGAGTTCAAGAGGAAAAACAAGAAG
GATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACCGCCTGTGA
AAGGGCTAAGAGGACCCTGTCATCAACTGCACAGACTACAATTGAGATTG
ATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAGGGCTAGA
TTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGCCAGTGGA
GAAATGCCTGAGAGATGCTAAGATGGACAAGAGCAGTGTCCATGATGTGG
TTCTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACTGTTGCAG
GACTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTGATGAAGC
GGTTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGTGAGGGTA
ATGAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTG
GGTTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACAC
CACTATTCCAACCAAGAATGAGCAGGTGTTCTCCACATACTCTGACAACC
AGCCCGGGGTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGT
GACAACAACTTGCTTGGAAAGTTTGATCCCTCTGGCATTCCTCCTGCTCC
AAGAGGGGT
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