CB250245

Overview
NameCB250245
Unique NameCB250245
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP72_ANOAL (Heat shock protein 70 A2 OS=Anopheles albimanus GN=HSP70A2 PE=3 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 6.439e-83
Identity = 157/235 (66.81%), Postives = 181/235 (77.02%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            RMV HFV+EFKRK KKD+S N RALRRLRTACERAKRTLSS+ + TIEID+L +GID+YT I+RARFEEL  DLFR  ++PVEK L DAKMDKSS+HD+VLVGGSTRIPKVQ LLQ+FF GK L  SINPDE           ILSG+ ++K+QD             ETAGGVMT LI RN+ IP K  ++FSTY+DNQPGV IQV+EGER  T+DNNLLG+FD SGIPPAPRG
Sbjct:  235 RMVAHFVEEFKRKFKKDLSKNARALRRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSDLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTKIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRG 469          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP71_ANOAL (Heat shock protein 70 A1 OS=Anopheles albimanus GN=HSP70A1 PE=3 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 6.439e-83
Identity = 157/235 (66.81%), Postives = 181/235 (77.02%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            RMV HFV+EFKRK KKD+S N RALRRLRTACERAKRTLSS+ + TIEID+L +GID+YT I+RARFEEL  DLFR  ++PVEK L DAKMDKSS+HD+VLVGGSTRIPKVQ LLQ+FF GK L  SINPDE           ILSG+ ++K+QD             ETAGGVMT LI RN+ IP K  ++FSTY+DNQPGV IQV+EGER  T+DNNLLG+FD SGIPPAPRG
Sbjct:  235 RMVAHFVEEFKRKFKKDLSKNARALRRLRTACERAKRTLSSSTEATIEIDALMDGIDYYTKISRARFEELCSDLFRSTLQPVEKALSDAKMDKSSIHDIVLVGGSTRIPKVQSLLQNFFAGKSLNLSINPDEAVAYGAAVQAAILSGDKDDKIQDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQTKIFSTYADNQPGVSIQVFEGERAMTKDNNLLGQFDLSGIPPAPRG 469          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP7B_DROME (Heat shock 70 kDa protein cognate 2 OS=Drosophila melanogaster GN=Hsc70-2 PE=1 SV=2)

HSP 1 Score: 305.449 bits (781), Expect = 1.873e-82
Identity = 151/235 (64.26%), Postives = 180/235 (76.60%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNHF +EFKRK+K DI GN RALRRLRTACERAKRTLSS+ + ++EID+L+EGIDFY+ I+RARFEELNMDLFR  M+PVE+ L DAKMDK ++HDVVLVGGSTRIPK+Q+LLQD F GK+L  SINPDE           IL+G G+ ++QD             ETAGGVMT L+ RN  IP K +Q+F+TYSDNQ  V IQVYEGER  T+DNNLLG F+ +GIPPAPRG
Sbjct:  237 RLVNHFAEEFKRKHKSDIKGNARALRRLRTACERAKRTLSSSTEASLEIDALHEGIDFYSKISRARFEELNMDLFRSTMQPVERALSDAKMDKKAIHDVVLVGGSTRIPKIQKLLQDLFGGKQLNLSINPDEAVAYGAAVQAAILTGVGSSQIQDLLLVDVAPLSLGIETAGGVMTNLVERNARIPCKQQQIFTTYSDNQNAVTIQVYEGERAMTKDNNLLGTFNLTGIPPAPRG 471          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 3.533e-81
Identity = 160/236 (67.80%), Postives = 180/236 (76.27%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V HF +EFKRKNK KD+S N RALRRLRTACERAKRTLSS AQ TIEID+L+E IDF  TITRARFEEL  DLFR  ++PVE+ L+DAKMDK +VHDVVLVGGSTRIPKV QL+ DFF GKEL KSINPDE  X        IL+G  +++ +              ETAGGVMT LI RNTTIPTK  Q+FSTYSDNQPGV IQV+EGERT T+D +LLG FD SGIPPAPRG
Sbjct:  238 RLVAHFTEEFKRKNKGKDLSSNLRALRRLRTACERAKRTLSSAAQATIEIDALFENIDFQATITRARFEELCGDLFRGTLQPVERVLQDAKMDKRAVHDVVLVGGSTRIPKVMQLVSDFFGGKELNKSINPDEAVXYGAAVQAFILTGGKSKQTEGLLLLDVAPLTLGIETAGGVMTALIKRNTTIPTKKSQIFSTYSDNQPGVHIQVFEGERTMTKDCHLLGTFDLSGIPPAPRG 473          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_HYDMA (Heat shock 70 kDa protein OS=Hydra magnipapillata GN=HSP70.1 PE=3 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 1.754e-80
Identity = 157/242 (64.88%), Postives = 180/242 (74.38%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDA-------KMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNHFV EFKRK+KKDIS N RALRRLRTACERAKRTLS++ Q ++EIDSL++GIDFYT+ITRARFEEL +DLFR  + PV   +R A          KS +H+VVLVGGSTRIPKVQ LLQ+FFNGKEL KSINPDE           IL+G+ +E VQD             ETAGGV T LI RNTT+PTK  QVF+TYSDNQPGVLIQV+EGER+ T  NNLLGKF+ SGIP APRG
Sbjct:  236 RLVNHFVDEFKRKHKKDISSNKRALRRLRTACERAKRTLSASTQASVEIDSLFDGIDFYTSITRARFEELCIDLFRGTLGPVADAIRGAGKNSSGQNFSKSDIHEVVLVGGSTRIPKVQSLLQEFFNGKELNKSINPDEAVAYGAAVQAAILAGDKHEAVQDLLLLDVAPLSLGIETAGGVFTPLIKRNTTVPTKYSQVFTTYSDNQPGVLIQVFEGERSMTAHNNLLGKFELSGIPLAPRG 477          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 298.516 bits (763), Expect = 2.290e-80
Identity = 153/235 (65.11%), Postives = 178/235 (75.74%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPR 704
            R+VN  V++FKRKN+ KD+S N RALRRLRT CERAKRTLSS+ Q TIEIDSL+EGID+  T++RARFEEL +D FR  + PVEK L+DA MDK SVH+VVLVGGSTRIPK+Q L+++FFNGKE C+SINPDE           ILSG+ +  VQD             ETAGGVMT LI RNTTIP K  Q+F+TY+DNQPGVLIQVYEGER  T+DNNLLGKF   GIPPAPR
Sbjct:  248 RLVNFCVEDFKRKNRGKDLSKNSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVTVSRARFEELCIDYFRDTLIPVEKVLKDAMMDKKSVHEVVLVGGSTRIPKIQTLIKEFFNGKEACRSINPDEAVAYGAAVQAAILSGDQSNAVQDLLLLDVCSLSLGLETAGGVMTKLIERNTTIPAKKSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPR 482          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 298.516 bits (763), Expect = 2.290e-80
Identity = 153/235 (65.11%), Postives = 178/235 (75.74%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNK-KDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPR 704
            R+VN  V++FKRKN+ KD+S N RALRRLRT CERAKRTLSS+ Q TIEIDSL+EGID+  T++RARFEEL +D FR  + PVEK L+DA MDK SVH+VVLVGGSTRIPK+Q L+++FFNGKE C+SINPDE           ILSG+ +  VQD             ETAGGVMT LI RNTTIP K  Q+F+TY+DNQPGVLIQVYEGER  T+DNNLLGKF   GIPPAPR
Sbjct:  248 RLVNFCVEDFKRKNRGKDLSKNSRALRRLRTQCERAKRTLSSSTQATIEIDSLFEGIDYSVTVSRARFEELCIDYFRDTLIPVEKVLKDAMMDKKSVHEVVLVGGSTRIPKIQTLIKEFFNGKEACRSINPDEAVAYGAAVQAAILSGDQSNAVQDLLLLDVCSLSLGLETAGGVMTKLIERNTTIPAKKSQIFTTYADNQPGVLIQVYEGERALTKDNNLLGKFHLDGIPPAPR 482          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 2.991e-80
Identity = 149/235 (63.40%), Postives = 180/235 (76.60%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+VNH   EFKRK KKD+  NPRA+RRLRTA ERAKRTLSS+AQ  IE+DSL+EGIDFYT+I+RARFE+L  DLFRKC+EPVE+ + DAK+DK  +  VVLVGGSTRIPK+Q+LLQ+F NGKEL KSINPDE           ILSG+ +++++D             ETAGGVM+ +I RNT +PTK  Q F+TYSDNQPGV IQV+EGER  T+DNN LG+F+ SGIPPAPRG
Sbjct:  236 RLVNHTSLEFKRKYKKDMRTNPRAIRRLRTAAERAKRTLSSSAQANIEVDSLFEGIDFYTSISRARFEDLCSDLFRKCLEPVERAILDAKIDKKKIDTVVLVGGSTRIPKIQKLLQEFLNGKELNKSINPDEAVAYGAAVQAAILSGDKSDEIKDVLLVDVAPLSLGIETAGGVMSKIIERNTRVPTKASQTFTTYSDNQPGVSIQVFEGERAMTKDNNRLGQFELSGIPPAPRG 470          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP75_DROME (Major heat shock 70 kDa protein Bc OS=Drosophila melanogaster GN=Hsp70Bc PE=2 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 3.906e-80
Identity = 152/235 (64.68%), Postives = 172/235 (73.19%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFYT ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQ+FF+GK L  SINPDE           ILSG+ + K+QD             ETAGGVMT LI RN  IP K  + FSTYSDNQPGV IQVYEGER  T+DNN LG FD SGIPPAPRG
Sbjct:  234 RLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRG 468          
BLAST of CB250245 vs. ExPASy Swiss-Prot
Match: HSP74_DROME (Major heat shock 70 kDa protein Bbb OS=Drosophila melanogaster GN=Hsp70Bbb PE=2 SV=2)

HSP 1 Score: 297.745 bits (761), Expect = 3.906e-80
Identity = 152/235 (64.68%), Postives = 172/235 (73.19%), Query Frame = 3
Query:    3 RMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXXXETAGGVMTVLIPRNTTIPTKNEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFDPSGIPPAPRG 707
            R+V H  +EFKRK KKD+  NPRALRRLRTA ERAKRTLSS+ + TIEID+L+EG DFYT ++RARFEEL  DLFR  ++PVEK L DAKMDK  +HD+VLVGGSTRIPKVQ LLQ+FF+GK L  SINPDE           ILSG+ + K+QD             ETAGGVMT LI RN  IP K  + FSTYSDNQPGV IQVYEGER  T+DNN LG FD SGIPPAPRG
Sbjct:  234 RLVTHLAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEATIEIDALFEGQDFYTKVSRARFEELCADLFRNTLQPVEKALNDAKMDKGQIHDIVLVGGSTRIPKVQSLLQEFFHGKNLNLSINPDEAVAYGAAVQAAILSGDQSGKIQDVLLVDVAPLSLGIETAGGVMTKLIERNCRIPCKQTKTFSTYSDNQPGVSIQVYEGERAMTKDNNALGTFDLSGIPPAPRG 468          
The following BLAST results are available for this feature:
BLAST of CB250245 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_ANOAL6.439e-8366.81Heat shock protein 70 A2 OS=Anopheles albimanus GN... [more]
HSP71_ANOAL6.439e-8366.81Heat shock protein 70 A1 OS=Anopheles albimanus GN... [more]
HSP7B_DROME1.873e-8264.26Heat shock 70 kDa protein cognate 2 OS=Drosophila ... [more]
HSP74_TRYBB3.533e-8167.80Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP70_HYDMA1.754e-8064.88Heat shock 70 kDa protein OS=Hydra magnipapillata ... [more]
HSP70_PLAFA2.290e-8065.11Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP70_PLACB2.290e-8065.11Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP74_PARLI2.991e-8063.40Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP75_DROME3.906e-8064.68Major heat shock 70 kDa protein Bc OS=Drosophila m... [more]
HSP74_DROME3.906e-8064.68Major heat shock 70 kDa protein Bbb OS=Drosophila ... [more]

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Properties
Property NameValue
Genbank descriptionEST0007 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ007 similar to 70 kDa heat shock protein (acc# P27322), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250245 ID=CB250245; Name=CB250245; organism=Citrus sinensis; type=EST; length=709bp
ACAGAATGGTGAACCACTTTGTTCAAGAGTTCAAGAGGAAAAACAAGAAG
GATATTAGTGGAAACCCCAGAGCGTTGAGGAGGTTGAGAACCGCCTGTGA
AAGGGCTAAGAGGACCCTGTCATCAACTGCACAGACTACAATTGAGATTG
ATTCTTTATATGAGGGTATTGATTTCTACACAACCATTACAAGGGCTAGA
TTCGAAGAGTTGAACATGGATTTGTTCAGGAAGTGTATGGAGCCAGTGGA
GAAATGCCTGAGAGATGCTAAGATGGACAAGAGCAGTGTCCATGATGTGG
TTCTTGTTGGTGGGTCTACTAGGATCCCAAAAGTCCAGCAACTGTTGCAG
GACTTCTTCAATGGAAAAGAGCTATGCAAGAGCATCAACCCTGATGAAGC
GGTTGCCTACGGTGCTGCTGTGCAGGCTGCAATCTTGAGTGGTGAGGGTA
ATGAGAAGGTTCAGGACCTCTTATTGCTTGACGTCACCCCTCTATCGCTG
GGTTTGGAGACTGCTGGTGGAGTCATGACTGTGTTGATTCCAAGGAACAC
CACTATTCCAACCAAGAATGAGCAGGTGTTCTCCACATACTCTGACAACC
AGCCCGGGGTGTTGATCCAGGTCTACGAGGGTGAGCGCACAAGAACCCGT
GACAACAACTTGCTTGGAAAGTTTGATCCCTCTGGCATTCCTCCTGCTCC
AAGAGGGGT
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