CB250257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR1_PECCC (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum GN=peh PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.789e-17 Identity = 65/177 (36.72%), Postives = 97/177 (54.80%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSV----GPGAT-NLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNY-CPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLS 550 NTDGI +S +TI S I TGDD V++ G T N+ I + G GHG+SIGS + GV NVTV + TGT NG+RIKS ++++G + + + +M NV PI+ID Y + N P SD+ ++DI TS T+ V L+ + +++++VKL+ Sbjct: 226 NTDGIDPMSSKNITIAHSNISTGDDNVAIKAYKGRSETRNISILHNEFGTGHGMSIGS-----ETMGVYNVTVDDLIMTGTTNGLRIKS-DKSAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPDW------SDITFKDI--TSQTKGVVVLNGENAKKPIEVTMKNVKLT 388
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_PENJA (Polygalacturonase OS=Penicillium janthinellum PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.808e-16 Identity = 64/190 (33.68%), Postives = 102/190 (53.68%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNV-DNPIIIDQNYCPDNENCPG-QASGVKISDVIYQDIHG---TSATEVGVKL--DCSSRNPCTGISLEDVKLS--YNNQPAEASC 580 NTDG + S+GVTI ++ + DDC+++ G N++ C GHG+SIGS+G V+NVT+T T T + NGVRIK+ ++G ++ F ++ + D I+I+Q+Y +N + G SGV I+D+ + I G + A EV + D S +G+ + + S N P+ ASC Sbjct: 187 NTDGFDISESTGVTIRNAVVKNQDDCIAINSG-QNIYFTGGTCSGGHGLSIGSVGGRDDNT-VKNVTITDSTVTDSANGVRIKT-VYDATGSVSDVTFSDITVSGITDYGIVIEQDY--ENGSPTGTPTSGVPITDLTVKGITGSVESDAVEVYILCGDDACSDWTWSGVDITSGQTSSKCENVPSGASC 371
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR2_PECCC (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum GN=pehA PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.084e-16 Identity = 63/177 (35.59%), Postives = 96/177 (54.24%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSV----GPGAT-NLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNY-CPDNENCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGISLEDVKLS 550 NTDGI +S +TI S I TGDD V++ G T N+ I + G GHG+SIGS + GV NVTV + GT NG+RIKS ++++G + + + +M NV PI+ID Y + N P SD+ ++D+ TS T+ V L+ + +++++VKL+ Sbjct: 226 NTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNISILHNDFGTGHGMSIGS-----ETMGVYNVTVDDLKMNGTTNGLRIKS-DKSAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPDW------SDITFKDV--TSETKGVVVLNGENAKKPIEVTMKNVKLT 388
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR4_ASPNG (Polygalacturonase-4 OS=Aspergillus niger GN=pgaE PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16 Identity = 58/195 (29.74%), Postives = 100/195 (51.28%), Query Frame = 2 Query: 26 GDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKS-WGRTSSGFARNILFQHALMNNV-DNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGT-SATEVGVKLDCSSRNPCTGISLEDVKLS-------YNNQPAEASC 580 G++ NTDG + S+ +TI + + DDCV+V G N++ C GHG+SIGS+G V+NVT +QNGVRIK+ +G T G + ++ ++++ D I+++QNY +E+ G+ I D + ++ G+ ++ + + C S + CT + DV ++ N P + SC Sbjct: 192 GEAANTDGFDIGDSTYITITGANVYNQDDCVAVNSG-ENIYFSGGVCSGGHGLSIGSVGGRSDNT-VKNVTFYDSDIKSSQNGVRIKTIYGDT--GSVSEVTYKEITLSDITDYGIVVEQNYDDTSES---PTDGITIEDFVLDNVQGSVESSGTNIYIVCGS-DSCTDWTWTDVDVTGGKTSSDCENVPDDISC 378
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR2_ASPTU (Polygalacturonase-2 OS=Aspergillus tubingensis GN=pgaII PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.871e-16 Identity = 60/190 (31.58%), Postives = 98/190 (51.58%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNV-DNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGT-SATEVGVKLDCSSRNPCTGISLEDVKL-------SYNNQPAEASC 580 NTD V S GV I+ + DDC+++ G N+W + C GHG+SIGS+G V+NVT+ T + ++N VRIK+ ++G I + + +M+ + D ++I Q+Y D + +GV I+DV + + GT + + L C S C+ + +DVK+ + N P+ ASC Sbjct: 178 NTDAFDVGNSVGVNIIKPWVHNQDDCLAINSGE-NIWFTSGTCIGGHGLSIGSVGGRSNNV-VKNVTIEHSTVSNSENAVRIKTVS-GATGSVSEITYSNIVMSGISDYGVVIQQDY-EDGKPTGKPTNGVTITDVKLESVTGTVDSKATDIYLLCGS-GSCSDWTWDDVKVTGGKKSTACKNYPSVASC 362
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR2_ASPNG (Endopolygalacturonase-2 OS=Aspergillus niger GN=pgaB PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15 Identity = 66/202 (32.67%), Postives = 103/202 (50.99%), Query Frame = 2 Query: 17 SAAGDSP---NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNV-DNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHG---TSATEVGVKLDCSSRNPCTGISLEDVKL-------SYNNQPAEASC 580 +A GD+ NTD V S GV I+ + DDC++V G N+W C GHG+SIGS+G V+NVT+ T + ++N VRIK+ ++G I + + +M+ + D ++I Q+Y D + +GV I DV + + G + ATE + L C S C+ + +DVK+ + N P+ ASC Sbjct: 168 NADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNSGE-NIWFTGGTCIGGHGLSIGSVGDRSNNV-VKNVTIEHSTVSNSENAVRIKTIS-GATGSVSEITYSNIVMSGISDYGVVIQQDY-EDGKPTGKPTNGVTIQDVKLESVTGSVDSGATE--IYLLCGS-GSCSDWTWDDVKVTGGKKSTACKNFPSVASC 362
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_PENGR (Polygalacturonase OS=Penicillium griseoroseum GN=PGG1 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.611e-15 Identity = 71/207 (34.30%), Postives = 105/207 (50.72%), Query Frame = 2 Query: 5 GVKVSAA-GDSP---NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKS-WGRTSSGFARNILFQHALMNNVDN-PIIIDQNYCPDNENCPG-QASGVKISDVIYQDIHGTSATE-VGVKLDCSSRNPCTGISLEDVKLSYNNQ-------PAEASC 580 G+ V A GDS NTD V +S+GV I + DDC++V G TN+ C GHGISIGS+G V VTV S T + NGVRIK+ +G T G + + ++ ++ + I+I+Q+Y +N + G SGV I+D+ ++HGT A+ V + C+S C+ S V ++ P+ ASC Sbjct: 177 GITVDTADGDSNGGHNTDAFDVGSSNGVYITSPIVHNQDDCLAVNSG-TNVHFTGAQCTGGHGISIGSVGGRSDNT-VDGVTVESCTIKDSDNGVRIKTVYGAT--GTVQGVTYKDITLSGIAKYGIVIEQDY--ENGSPTGTPTSGVPITDLTLDNVHGTVASSGVDTYILCAS-GACSDWSWSGVSITGGQTSKKCKGIPSGASC 376
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR1_ASPAC (Polygalacturonase 1 OS=Aspergillus aculeatus GN=pga1 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.410e-15 Identity = 58/190 (30.53%), Postives = 95/190 (50.00%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDN-PIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGTSATE-VGVKLDCSSRNPCTGISLEDVKLS-------YNNQPAEASC 580 NTD + S+ VTI + + DDCV+V G N++ C GHG+SIGS+G V+NVT T + NGVRIK+ ++G ++ ++ + ++ I++ QNY D + P +GV I+D + ++HG+ + + + C S C+ + DV +S N P+ ASC Sbjct: 196 NTDAFDIGTSTYVTISGATVYNQDDCVAVNSG-ENIYFSGGYCSGGHGLSIGSVGGRSDNT-VKNVTFVDSTIINSDNGVRIKT-NIDTTGSVSDVTYKDITLTSIAKYGIVVQQNY-GDTSSTP--TTGVPITDFVLDNVHGSVVSSGTNILISCGS-GSCSDWTWTDVSVSGGKTSSKCTNVPSGASC 378
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_PENEN (Polygalacturonase OS=Penicillium expansum GN=PEPG1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14 Identity = 52/174 (29.89%), Postives = 89/174 (51.15%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNP-IIIDQNYCPDNENCPGQ-ASGVKISDVIYQDIHGTSATE-VGVKLDCSSRNPCTGISLEDVKLS 550 NTDG + S +TI + + DDC+++ G TN+ C GHG+SIGS+G V+ V ++S +QNGVR+K+ ++G + + FQ ++ + + I I Q Y N G +GV I+ + ++HGT ++ + ++C S C+G + V +S Sbjct: 195 NTDGFDIGDSDSITITGATVYNQDDCLAINSG-TNIVFSGGYCSGGHGLSIGSVGGRSNNV-VETVHISSTQVVNSQNGVRVKAVS-GATGTIKGVTFQDITLSGITSQGITIRQEY--TNSGYTGSPTTGVPITGLTLNNVHGTVTSKGTDITIECGSSASCSGWTWTKVAVS 363
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_PENDI (Polygalacturonase OS=Penicillium digitatum GN=PG1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14 Identity = 65/190 (34.21%), Postives = 106/190 (55.79%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDN-PIIIDQNYCPDNENCPGQ-ASGVKISDVIYQDIHGT---SATEVGVKL-DCSSRN-PCTGISLEDVKLS--YNNQPAEASC 580 NTD V +S+ +TI ++ I DDC+++ G +N+ C GHGISIGS+G V++VT++ T + NGVR+K+ + ++G + F + ++N+ I+I+Q+Y +N + G+ +GV IS++ +++ GT SATEV + + S +N G SL K S N PA ASC Sbjct: 183 NTDAFDVGSSTFITISNANIKNQDDCLAINSG-SNIKFVGGTCSGGHGISIGSVGLRDNNI-VKDVTISDSTVINSDNGVRVKTIYQ-ATGAVSGVTFSNIKLSNIAKYGIVIEQDY--ENGSPTGKPTNGVPISELTIENVTGTLKSSATEVYILCGNGSCKNWKWAGNSLSGGKKSGKCGNVPAGASC 367 The following BLAST results are available for this feature:
BLAST of CB250257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250257 ID=CB250257; Name=CB250257; organism=Citrus sinensis; type=EST; length=715bpback to top |