CB250257
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR1_ASPNG (Polygalacturonase-1 OS=Aspergillus niger GN=pgaA PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.296e-14 Identity = 62/190 (32.63%), Postives = 99/190 (52.11%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNV-DNPIIIDQNYCPDNENCPGQAS-GVKISDVIYQDIHGT---SATEVGVKLDCSSRNPCT--GISLEDVKLS--YNNQPAEASC 580 NTDG + S+GV I + + DDC+++ G ++ C GHG+SIGS+G V+NVT++ T + + NGVRIK+ + +G I + + ++ + D I+I+Q+Y +N + G S G+ I+DV + GT AT+V + S + T G+ L K S N P+ ASC Sbjct: 184 NTDGFDISESTGVYISGATVKNQDDCIAINSG-ESISFTGGTCSGGHGLSIGSVGGRDDNT-VKNVTISDSTVSNSANGVRIKTIYK-ETGDVSEITYSNIQLSGITDYGIVIEQDY--ENGSPTGTPSTGIPITDVTVDGVTGTLEDDATQVYILCGDGSCSDWTWSGVDLSGGKTSDKCENVPSGASC 368
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_GIBFU (Polygalacturonase OS=Gibberella fujikuroi GN=PGA PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14 Identity = 57/182 (31.32%), Postives = 90/182 (49.45%), Query Frame = 2 Query: 23 AGDSPN-----------TDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDN-PIIIDQNYCPDNENCPGQ-ASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCTGIS 529 AGD PN TDG + +S VT+ ++ + DDCV+V G TN+ + N+ C GHG+SIGS+G + V V S +QNG RIKS ++G N+ +Q+ + N+ + + Q+Y N G+ +GVKIS++ + + GT A+ C+G + Sbjct: 173 AGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSG-TNIVVSNMYCSGGHGLSIGSVGGKSDNV-VDGVQFLSSQVVNSQNGCRIKS-NSGATGTINNVTYQNIALTNISTYGVDVQQDYL--NGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFILCGDGSCSGFT 349
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLRA_ASPFL (Polygalacturonase A OS=Aspergillus flavus GN=pecA PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14 Identity = 57/197 (28.93%), Postives = 103/197 (52.28%), Query Frame = 2 Query: 17 SAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDN-PIIIDQNYCPDNENCPG-QASGVKISDVIYQDIHGT---SATEVGVKLDCSSRNPCT--GISLEDVKLS--YNNQPAEASC 580 + + NTD V +S+ + I + + DDC+++ G+ ++ N C GHG+SIGS+G V++VT+++ +QNGVRIK+ ++G N+ F+ ++ + +I++Q+Y +N + G +G+K+SD+ + + GT AT++ + S T G+S+ K S N P ASC Sbjct: 172 AGTAEGHNTDAFDVGSSTYINIDGATVYNQDDCLAINSGS-HITFTNGYCDGGHGLSIGSVGGRSDNT-VEDVTISNSKVVNSQNGVRIKT-VYDATGTVSNVKFEDITLSGITKYGLIVEQDY--ENGSPTGTPTNGIKVSDITFDKVTGTVESDATDIYILCGSGSCTDWTWSGVSITGGKTSSKCENVPTGASC 363
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR3_ASPNG (Polygalacturonase-3 OS=Aspergillus niger GN=pgaC PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14 Identity = 60/189 (31.75%), Postives = 93/189 (49.21%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPIIIDQNYCPDNENCPGQASGVKISDVIYQDIHGT----SATEVGVKLDCSSRN--PCTGISLEDVKLSYN--NQPAEASC 580 NTDG + S+ +TI ++I DDCV++ G N++ C GHG+SIGS+G V+NVT V +Q +RIK+ + + + A + D I+I+QNY D P +GV I+D + ++I GT TEV + S + TG+S+ +S + N P+ SC Sbjct: 198 NTDGFDIGESTYITITGAEIYNQDDCVAINSG-ENIYFSASVCSGGHGLSIGSVGGRDDNT-VKNVTFYDVNVLKSQQAIRIKTIYGDTGSVSEVTYHEIAFSDATDYGIVIEQNY-DDTSKTP--TTGVPITDFVLENIVGTCEDDDCTEVYIACGDGSCSDWTWTGVSVTGGSVSDDCLNVPSGISC 381
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLRB_ASPFL (Polygalacturonase B OS=Aspergillus flavus GN=pecB PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 8.399e-14 Identity = 57/190 (30.00%), Postives = 93/190 (48.95%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNV-DNPIIIDQNYCPDNENCPGQ-ASGVKISDVIYQDIHGTSATEVGVKLDCSSRNPCT-----GISLEDVKLS--YNNQPAEASC 580 NTD V S+GV I + + DDC+++ G N+ C GHGISIGS+G V+NV V T + NG+RIK+ ++G + +++ + N+ N I+I+ +Y N G+ +GV I+D+ + G+ A++ + C+ G+S+ K S N P+ ASC Sbjct: 182 NTDAFDVSESNGVYITGANVKNQDDCLAINSG-ENIEFTGATCSGGHGISIGSIGNRDTNT-VKNVKVADSTVVDSDNGIRIKTIS-GATGSVSGVTYENITLKNIKKNGIVIELDY--KNGGPTGKPTTGVPITDLTVNGVTGSVASKATPVYILCGKGSCSDWTWKGVSISGGKKSDKCQNIPSGASC 366
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR1_COLLN (Endopolygalacturonase 1 OS=Colletotrichum lindemuthianum GN=PG1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13 Identity = 61/186 (32.80%), Postives = 100/186 (53.76%), Query Frame = 2 Query: 17 SAAGDSP---NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDN-PIIIDQNYCPDNENCPGQ-ASGVKISDVIYQDIHG---TSATEVGVKLDCSSRNPCTGISLEDVKLS 550 ++AGDS NTD V +S+GV I + + DDC++V G TN+ C GHG+SIGS+G + V++V++T+ + NGVRIK+ ++G +I + ++N+ I+I+Q+Y +N + G+ SGV IS + I G +SAT V + + +G+S+ K S Sbjct: 169 NSAGDSAGGHNTDAFDVGSSTGVYISGADVKNQDDCLAVNSG-TNITFTGGTCSGGHGLSIGSVGGRKDNV-VKSVSITNSKIINSDNGVRIKTVA-GATGPVSDITYSGITLSNIAKYGIVIEQDY--ENGSPTGKPTSGVPISGLTLSKISGSVSSSATPVYILCASCTNWKWSGVSVTGGKKS 349
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_ASPOR (Polygalacturonase OS=Aspergillus oryzae GN=AO090023000161 PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13 Identity = 56/197 (28.43%), Postives = 102/197 (51.78%), Query Frame = 2 Query: 17 SAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDN-PIIIDQNYCPDNENCPG-QASGVKISDVIYQDIHGT---SATEVGVKLDCSSRNPCT--GISLEDVKLS--YNNQPAEASC 580 + + NTD V +S+ + I + + DDC+++ G+ ++ N C GHG+SIGS+G V++VT+++ +QNGVRIK+ ++G N+ F+ ++ + +I++Q+Y +N + G +G+K+SD+ + + GT AT++ + S T G+S+ K S N ASC Sbjct: 172 AGTAEGHNTDAFDVGSSTYINIDGATVYNQDDCLAINSGS-HITFTNGYCDGGHGLSIGSVGGRSDNT-VEDVTISNSKVVNSQNGVRIKT-VYDATGTVSNVKFEDITLSGITKYGLIVEQDY--ENGSPTGTPTNGIKVSDITFDKVTGTVESDATDIYILCGSGSCTDWTWSGVSITGGKTSSKCENVSTGASC 363
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR2_PENOL (Polygalacturonase 2 OS=Penicillium olsonii GN=PG2 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13 Identity = 59/191 (30.89%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDN-PIIIDQNYCPDNENCPG-QASGVKISDVIYQDIHGTSATE-VGVKLDCSSRNPCT-----GISLEDVKLS--YNNQPAEASC 580 NTD V +S+G+TI + + DDC++V G T++ C GHG+SIGS+G V NV + + + NGVRIK+ ++G +N+ ++ ++ + I+I+Q+Y +N + G GV I+D+ + GT A+ V + C + C+ G+S+ K S N P+ ASC Sbjct: 196 NTDAFDVGSSTGITITGATVYNQDDCLAVNSG-TDITFTGGLCSGGHGLSIGSVGGRSNN-DVANVIIENSQIQDSTNGVRIKT-VYEATGSVKNVTYKDITLSGITKYGIVIEQDY--ENGSPTGTPTDGVPITDLTLDGVKGTVASSGTNVYILC-AEGACSDWTWDGVSVSGGKTSSACENVPSSASC 380
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR_ASPPA (Polygalacturonase OS=Aspergillus parasiticus GN=pecA PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 55/198 (27.78%), Postives = 103/198 (52.02%), Query Frame = 2 Query: 17 SAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKS-WGRTSSGFARNILFQHALMNNVDN-PIIIDQNYCPDNENCPG-QASGVKISDVIYQDIHGT---SATEVGVKLDCSSRNPCT--GISLEDVKLS--YNNQPAEASC 580 + + NTD + +S+ + I + + DDC+++ G+ ++ N C GHG+SIGS+G V++VT+++ +QNGVRIK+ +G T G N+ F+ ++ + ++++Q+Y +N + G +G+ +S + ++ + GT AT++ + S T G+S+ K S N P ASC Sbjct: 172 AGTAEGHNTDAFDIGSSTYINIDGATVYNQDDCLAINSGS-HITFTNGYCDGGHGLSIGSVGGRSDNT-VEDVTISNSKVVNSQNGVRIKTVYGAT--GTVSNVKFEDITLSGITKYGLVVEQDY--ENGSPTGTPTNGITVSGITFEKVTGTVESDATDIYILCGSGSCTDWTWSGVSITGGKTSSKCENVPTGASC 363
BLAST of CB250257 vs. ExPASy Swiss-Prot
Match: PGLR1_SCLSC (Endo-polygalacturonase OS=Sclerotinia sclerotiorum GN=PG1 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.069e-12 Identity = 53/164 (32.32%), Postives = 90/164 (54.88%), Query Frame = 2 Query: 17 SAAGDS--PNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDN-PIIIDQNYCPDNENCPGQ-ASGVKISDVIYQDIHGT---SATEVGV 487 ++AG+S NTD V +S+ +TI + + DDC+++ G T + C GHG+SIGS+G V +V + S T + NGVRIK+ ++G + ++ ++ + + ++I+Q+Y +N + G+ SGV I+ V ++HGT SAT V V Sbjct: 190 NSAGNSLGHNTDAFDVGSSTDITISGANVQNQDDCLAINSG-TGITFTGGTCSGGHGLSIGSVGGRSDNV-VSDVIIESSTVKNSANGVRIKT-VLGATGSVSGVTYKDITLSGITSYGVVIEQDY--ENGSPTGKPTSGVPITGVTLSNVHGTVSSSATNVYV 348 The following BLAST results are available for this feature:
BLAST of CB250257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250257 ID=CB250257; Name=CB250257; organism=Citrus sinensis; type=EST; length=715bpback to top |