CB250300

Overview
NameCB250300
Unique NameCB250300
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length437
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_METMP (Arginine biosynthesis bifunctional protein argJ OS=Methanococcus maripaludis GN=argJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.820e-11
Identity = 37/96 (38.54%), Postives = 47/96 (48.96%), Query Frame = 1
Query:   64 DCNEAKQLQACLDVVMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGD 351
            DC E  +    L  V + LAK    DGEGA  LIE  V GA ++ +A K               +G DPNWGRIAAA GY+G     N   +++ D
Sbjct:  246 DCKE--EFDHALTYVSKELAKMIVSDGEGAKKLIEATVFGAETKEDAKKASMSIVRSLLLKTAVFGADPNWGRIAAAVGYSGAEMDMNNFDIIISD 339          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_LISMF (Arginine biosynthesis bifunctional protein argJ OS=Listeria monocytogenes serotype 4b (strain F2365) GN=argJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.820e-11
Identity = 38/105 (36.19%), Postives = 53/105 (50.48%), Query Frame = 1
Query:  106 VMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGGQPLPFDRAVAGNYLRK 420
            VM+ LAKS A DGEGAT LIEV+V GA    +A  I              +G D NWGRI  A GY+G  F  + + + +G   +++      F++     YL +
Sbjct:  258 VMEHLAKSIARDGEGATKLIEVQVNGATKTEDARMIAKKIVSSSLVKTAAFGGDGNWGRIICAIGYSGGRFAPDNITIKIGGIEILNHSSQTIFNQQALDAYLEE 362          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_GEOSL (Arginine biosynthesis bifunctional protein argJ OS=Geobacter sulfurreducens GN=argJ PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.820e-11
Identity = 35/99 (35.35%), Postives = 50/99 (50.51%), Query Frame = 1
Query:   76 AKQLQACLDVVMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGG 372
            A +    L+ V+  LAK    DGEGAT  +EV V GA S+A+A +               +G+D NWGRI AA GY+G     ++  +   D  ++ GG
Sbjct:  242 AAEFAVLLEEVLLSLAKLIVKDGEGATKFVEVTVKGARSDADAKRAAMAVANSCLVKTAFFGQDANWGRIFAAVGYSGADVEPDRAELFFDDVRMVQGG 340          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_BACCR (Arginine biosynthesis bifunctional protein argJ OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=argJ PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.295e-11
Identity = 37/97 (38.14%), Postives = 49/97 (50.52%), Query Frame = 1
Query:   97 LDVVMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGGQPLPF 387
            L  V + LAK  A DGEGAT LIEV V GA +  EA KI              +G DPNWGRI ++ G + V+   N + + L    ++   +P  F
Sbjct:  265 LQKVCEDLAKKIAQDGEGATKLIEVNVLGAQTNEEAKKIAKQIVGSSLVKTAIHGEDPNWGRIISSIGQSEVAINPNTIDITLQSISVLKNSEPQTF 361          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_ARCFU (Arginine biosynthesis bifunctional protein argJ OS=Archaeoglobus fulgidus GN=argJ PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 6.295e-11
Identity = 39/96 (40.62%), Postives = 51/96 (53.12%), Query Frame = 1
Query:  106 VMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDS----LLMDGGQPL 381
            V   +AK  A DGEGAT + EVRV GA ++ +A  I              +G DPNWGRI AAAGY+G      ++ + L D      L+D G+PL
Sbjct:  236 VFYSIAKQMARDGEGATKVFEVRVDGARNDEDANLIARAVASSLLVKTAIFGCDPNWGRIIAAAGYSGAD-VDERITLSLSDGRDEVFLIDSGRPL 330          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_BACC1 (Arginine biosynthesis bifunctional protein argJ OS=Bacillus cereus (strain ATCC 10987) GN=argJ PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.221e-11
Identity = 37/97 (38.14%), Postives = 48/97 (49.48%), Query Frame = 1
Query:   97 LDVVMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDGGQPLPF 387
            L  V + LAK  A DGEGAT LIEV V GA +  EA KI              +G DPNWGRI +  G + V+   N + + L    ++   +P  F
Sbjct:  264 LQKVCEDLAKKIAQDGEGATKLIEVNVLGARTNEEAKKIAKQIVGSSLVKTAIHGEDPNWGRIISTIGQSEVAINPNTIDITLQSIAVLKNSEPQMF 360          
BLAST of CB250300 vs. ExPASy Swiss-Prot
Match: ARGJ_AQUAE (Arginine biosynthesis bifunctional protein argJ OS=Aquifex aeolicus GN=argJ PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 8.221e-11
Identity = 38/88 (43.18%), Postives = 46/88 (52.27%), Query Frame = 1
Query:  106 VMQGLAKSTAWDGEGATCLIEVRVTGANSEAEAAKIXXXXXXXXXXXXXXYGRDPNWGRIAAAAGYAGVSFYQNKLRVLLGDSLLMDG 369
            V + LAK    DGEGAT +I V V  A +E +A +I              +GRDPNWGRIAAAAG         KL + +G  LL DG
Sbjct:  239 VSESLAKQIVADGEGATKIIRVNVRSAITEIKAREIAEAIANSLLVKTAVFGRDPNWGRIAAAAGSTEFPIDPFKLEIYVGGYLLYDG 326          
The following BLAST results are available for this feature:
BLAST of CB250300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
ARGJ_METMP4.820e-1138.54Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_LISMF4.820e-1136.19Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_GEOSL4.820e-1135.35Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_BACCR6.295e-1138.14Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_ARCFU6.295e-1140.63Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_BACC18.221e-1138.14Arginine biosynthesis bifunctional protein argJ OS... [more]
ARGJ_AQUAE8.221e-1143.18Arginine biosynthesis bifunctional protein argJ OS... [more]

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Properties
Property NameValue
Genbank descriptionEST0079 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ107 similar to putative glutamate/ornithine acetyltransferase (acc# NP_565863), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250300 ID=CB250300; Name=CB250300; organism=Citrus sinensis; type=EST; length=437bp
ACCAATGATACTGTCATAGCTTTGGCTAGTGGGTTATCTAGATCAAGCAG
GTTATCTTCTGTTGACTGTAACGAAGCCAAGCAACTTCAAGCATGCCTTG
ATGTGGTAATGCAAGGTCTTGCCAAGTCTACAGCTTGGGATGGAGAAGGA
GCAACGTGCTTAATTGAGGTCAGAGTGACCGGTGCTAACAGTGAGGCTGA
AGCAGCCAAGATCGCCCGCTCAGTGGCATCTTCTTCACTTGTCAAGGCAG
CTGTATACGGCAGAGATCCGAACTGGGGACGCATTGCTGCAGCTGCTGGA
TATGCAGGGGTTTCTTTCTACCAAAACAAGCTCCGCGTATTGCTTGGAGA
TAGTTTGCTCATGGATGGTGGGCAACCACTCCCATTTGACAGGGCTGTGG
CTGGTAACTATCTCAGGAAGGCTGGTGAGACCCGCGG
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