CB250308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: DYN1_BOVIN (Dynamin-1 OS=Bos taurus GN=DNM1 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.592e-46 Identity = 87/139 (62.59%), Postives = 111/139 (79.86%), Query Frame = 3 Query: 6 EFLHLPGKRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTL 422 EFLH GK+F DF E+R EI+A+TD+ G NKG+S I L+++SPHVL++TLVDLPG+TKVPVG+QP DIE +IR M+M ++ + +CLILAV+PANSDLANSDAL++A DP G RTIG+ITKLD+MD GT A L Sbjct: 82 EFLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKVAKEVDPQGQRTIGVITKLDLMDEGTDARDVL 220
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: DYN_DROME (Dynamin OS=Drosophila melanogaster GN=shi PE=1 SV=2) HSP 1 Score: 182.57 bits (462), Expect = 6.051e-46 Identity = 84/140 (60.00%), Postives = 112/140 (80.00%), Query Frame = 3 Query: 3 GEFLHLPGKRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTL 422 GEFLH+ GK+F F EIR+EI+ +TD+ G NKG+S+ I L+++SPHVL++TL+DLPG+TKV +G+QP DIE +I+ MI +I++ +CLILAVTPAN+DLANSDAL++A DP G RTIG+ITKLD+MD GT A L Sbjct: 76 GEFLHIKGKKFSSFDEIRKEIEDETDRVTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIRKETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVITKLDLMDEGTDARDIL 215
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: VPS1_YEAST (Vacuolar protein sorting-associated protein 1 OS=Saccharomyces cerevisiae GN=VPS1 PE=1 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 2.299e-45 Identity = 83/140 (59.29%), Postives = 110/140 (78.57%), Query Frame = 3 Query: 3 GEFLHLPGKRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTL 422 GEFLHLPGK+FY+F EIR+EI +TDK G N G+S I L+I+SPHVL +TLVDLPG+TKVPVG+QP DIE +I+ M++ YI +P+ +IL+V AN+DLANSD L++A DP+G RTIG++TK+D+MD+GT L Sbjct: 123 GEFLHLPGKKFYNFDEIRKEIVKETDKVTGANSGISSVPINLRIYSPHVLTLTLVDLPGLTKVPVGDQPPDIERQIKDMLLKYISKPNAIILSVNAANTDLANSDGLKLAREVDPEGTRTIGVLTKVDLMDQGTDVIDIL 262
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: DYN2_RAT (Dynamin-2 OS=Rattus norvegicus GN=Dnm2 PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 3.922e-45 Identity = 86/139 (61.87%), Postives = 109/139 (78.42%), Query Frame = 3 Query: 6 EFLHLPGKRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTL 422 EFLH K+F DF E+R+EI+A+TD+ G NKG+S I L+++SPHVL++TL+DLPGITKVPVG+QP DIE +I+ MI+ +I + S LILAVTPAN DLANSDAL++A DP G RTIG+ITKLD+MD GT A L Sbjct: 82 EFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVL 220
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: DYN2_MOUSE (Dynamin-2 OS=Mus musculus GN=Dnm2 PE=1 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 3.922e-45 Identity = 86/139 (61.87%), Postives = 109/139 (78.42%), Query Frame = 3 Query: 6 EFLHLPGKRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTL 422 EFLH K+F DF E+R+EI+A+TD+ G NKG+S I L+++SPHVL++TL+DLPGITKVPVG+QP DIE +I+ MI+ +I + S LILAVTPAN DLANSDAL++A DP G RTIG+ITKLD+MD GT A L Sbjct: 82 EFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVL 220
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: DYN2_HUMAN (Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 3.922e-45 Identity = 86/139 (61.87%), Postives = 109/139 (78.42%), Query Frame = 3 Query: 6 EFLHLPGKRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTL 422 EFLH K+F DF E+R+EI+A+TD+ G NKG+S I L+++SPHVL++TL+DLPGITKVPVG+QP DIE +I+ MI+ +I + S LILAVTPAN DLANSDAL++A DP G RTIG+ITKLD+MD GT A L Sbjct: 82 EFLHCKSKKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGITKVPVGDQPPDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVL 220
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: DYN1_CAEEL (Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV=3) HSP 1 Score: 179.874 bits (455), Expect = 3.922e-45 Identity = 85/139 (61.15%), Postives = 110/139 (79.14%), Query Frame = 3 Query: 6 EFLHLPGKRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTL 422 EFLH G RF DF +R+EI+ +TD+ G NKG+S I L++FSP+VL++TL+DLPG+TKVPVG+QPADIE +IR MI+++I + +CLILAVTPANSDLA SDAL++A DP G RTIG++TKLD+MD GT A L Sbjct: 84 EFLHKKGHRFVDFDAVRKEIEDETDRVTGQNKGISPHPINLRVFSPNVLNLTLIDLPGLTKVPVGDQPADIEQQIRDMILTFINRETCLILAVTPANSDLATSDALKLAKEVDPQGLRTIGVLTKLDLMDEGTDAREIL 222
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: DYN2_BOVIN (Dynamin-2 OS=Bos taurus GN=DNM2 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 6.690e-45 Identity = 86/139 (61.87%), Postives = 109/139 (78.42%), Query Frame = 3 Query: 6 EFLHLPGKRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTL 422 EFLH ++F DF E+R+EI+A+TD+ G NKG+S I L+I+SPHVL++TL+DLPGITKVPVG+QP DIE +I+ MI+ +I + S LILAVTPAN DLANSDAL++A DP G RTIG+ITKLD+MD GT A L Sbjct: 82 EFLHCKSRKFTDFEEVRQEIEAETDRVTGTNKGISPVPINLRIYSPHVLNLTLIDLPGITKVPVGDQPQDIEYQIKDMILQFISRESSLILAVTPANMDLANSDALKLAKEVDPQGLRTIGVITKLDLMDEGTDARDVL 220
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: DNM1L_DANRE (Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=2 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 7.397e-44 Identity = 82/141 (58.16%), Postives = 111/141 (78.72%), Query Frame = 3 Query: 3 GEFLHLPGKRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTLI 425 G+FLH K + DF EIR+EI+ +T++ +G NKG+SD+ I LKIFSPHV+++TLVDLPGITKVPVG+QP DIE +IR +I+ YI P+ +ILAVT AN+D+A S+AL++A DPDG RT+ ++TKLD+MD GT A L+ Sbjct: 90 GKFLHTKNKIYTDFDEIRQEIENETERVSGNNKGISDEPIHLKIFSPHVVNLTLVDLPGITKVPVGDQPKDIELQIRELILKYISNPNSIILAVTAANTDMATSEALKVAREVDPDGRRTLAVVTKLDLMDAGTDAMDVLM 230
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: VPS1_SCHPO (Vacuolar protein sorting-associated protein 1 OS=Schizosaccharomyces pombe GN=vps1 PE=2 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 1.068e-42 Identity = 79/140 (56.43%), Postives = 109/140 (77.86%), Query Frame = 3 Query: 3 GEFLHLPGKRFYDFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTL 422 GEFLHLPG++F++F +IR EI +T+++ G N G+S I L+I+SPHVL +TLVDLPG+TKVPVG+QP DIE +IR M++ YI + + +ILAV AN+DLANSD L++A DP+G RTIG++TK+D+MD+GT L Sbjct: 98 GEFLHLPGQKFFEFEKIREEIVRETEEKTGKNVGISSVPIYLRIYSPHVLTLTLVDLPGLTKVPVGDQPRDIEKQIREMVLKYISKNNAIILAVNAANTDLANSDGLKLAREVDPEGLRTIGVLTKVDLMDKGTDVVDIL 237 The following BLAST results are available for this feature:
BLAST of CB250308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250308 ID=CB250308; Name=CB250308; organism=Citrus sinensis; type=EST; length=436bpback to top |