CB250308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX_SINCH (Interferon-induced GTP-binding protein Mx OS=Siniperca chuatsi GN=mx PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.511e-23 Identity = 53/122 (43.44%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D +++ ++I+ D+ AG G+SD I L+I SP V D+TL+DLPGI +V V QP +I +I+ +I ++I + + L V P N D+A ++AL +A DPDG RT+GI+TK D++D+GT Sbjct: 98 DPADVEKKIREAQDEMAGVGVGISDDLISLEIGSPGVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQTFITKQETISLVVVPCNVDIATTEALNMAQRVDPDGERTLGILTKPDLVDKGT 219
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX_ONCMY (Interferon-induced GTP-binding protein Mx OS=Oncorhynchus mykiss GN=mx PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.511e-23 Identity = 53/122 (43.44%), Postives = 82/122 (67.21%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D S++ ++I+ D+ AG G+SD I L+I SP V D+TL+DLPGI +V V QP +I +I+ +I +I + + L V P N D+A ++AL++A DP+G RT+GI+TK D++D+GT Sbjct: 99 DPSDVEKKIREAQDEMAGVGVGISDDLISLEIGSPDVPDLTLIDLPGIARVAVKGQPENIGEQIKRLIRKFIMKQETISLVVVPCNVDIATTEALKMAQEVDPEGERTLGILTKPDLVDKGT 220
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX_DICLA (Interferon-induced GTP-binding protein Mx OS=Dicentrarchus labrax GN=mx PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 9.401e-23 Identity = 52/122 (42.62%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D +++ ++I+ +K AG G+S+ I L+I SP V D+TL+DLPGI +V V QP +I +I+ +I +I + + L V P N D+A ++AL +A DPDG RT+GI+TK D++D+GT Sbjct: 98 DPADVEKKIREAQNKIAGPGSGISEDLISLEIASPDVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIQKFITKQETISLVVVPCNVDIATTEALNMAQRVDPDGERTLGILTKPDLVDKGT 219
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MXE_DANRE (Interferon-induced GTP-binding protein MxE OS=Danio rerio GN=mxe PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 9.401e-23 Identity = 53/121 (43.80%), Postives = 80/121 (66.12%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRG 401 D ++I + + AG +G+S + I L+I S V D+TL+DLPGI +V G QP DIE +I+++I +IK+ + L V PAN D+A ++AL++A DP G RT+GI+TK D++DRG Sbjct: 108 DPAKIEKAVLNAQTALAGIGEGISHEMITLEIQSCDVPDLTLIDLPGIARVATGNQPEDIEKQIKSLIEKFIKRQETISLVVVPANIDIATTEALKMASTVDPTGQRTLGILTKPDLVDRG 228
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX_CHICK (Interferon-induced GTP-binding protein Mx OS=Gallus gallus GN=MX PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.735e-22 Identity = 51/120 (42.50%), Postives = 79/120 (65.83%), Query Frame = 3 Query: 45 SEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 SE+++ I+ D AG N +S + I L+I+SP V D+TL+DLPGI + VG QP D +I+T++ YI +I+ V P N D+A ++AL++A DP G RT+G++TK D+++ GT Sbjct: 181 SEVKKAIRKAQDIVAGTNGSISGELISLEIWSPDVPDLTLIDLPGIAREAVGNQPQDNGQQIKTLLKKYIGCKETIIVVVVPCNVDIATTEALKMAQEVDPTGERTLGVLTKPDLVNEGT 300
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX_SOLSE (Interferon-induced GTP-binding protein Mx OS=Solea senegalensis GN=mx PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.039e-21 Identity = 52/122 (42.62%), Postives = 81/122 (66.39%), Query Frame = 3 Query: 39 DFSEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 D +++ ++I+ + AG G+S+ I L+I SP V D+TL+DLPGIT+V V QP +I +I+ +I +I + + L V N DLA ++ALQ+A DP+G RT+GI+TK D++D+GT Sbjct: 98 DPADVEKKIEEAQIQIAGVGVGISENMISLEIASPDVPDLTLIDLPGITRVAVHGQPVNIGEQIKKLIHKFITKQETICLVVHACNVDLATTEALQMAQEEDPEGERTLGILTKPDLVDKGT 219
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MXC_DANRE (Interferon-induced GTP-binding protein MxC OS=Danio rerio GN=mxc PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.357e-21 Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 3 Query: 87 AGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRG 401 AG +G+S + I L+I S V D+TL+DLPGI +V G QP DIE +I+ +I +IK+ + L V PAN D+A ++AL++A DP G RT+ I+TK D++DRG Sbjct: 124 AGTGEGISHEMITLEIQSCDVPDLTLIDLPGIARVATGNQPEDIEKQIKDLIEKFIKRQETISLVVVPANIDIATTEALKMASTVDPTGQRTLCILTKPDLVDRG 228
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX1_ICTPU (Interferon-induced GTP-binding protein Mx1 OS=Ictalurus punctatus GN=mx1 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.773e-21 Identity = 50/127 (39.37%), Postives = 82/127 (64.57%), Query Frame = 3 Query: 45 SEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTSAATTLI 425 +++ ++I+ D AG G+SD+ I L++ S V D+TL+DLPGI +V V QP +I +I+ +I +I + + L V P+N D+A ++AL++A DP+G RT+GI+TK D++D+GT I Sbjct: 106 ADVEKKIREAQDHMAGVGVGISDELISLEVTSADVPDLTLIDLPGIARVAVKGQPENIGEQIKRLIKKFITKQETINLVVVPSNVDIATTEALKMAQEVDPNGERTLGILTKPDLVDKGTEETVVSI 232
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX_LARCR (Interferon-induced GTP-binding protein Mx OS=Larimichthys crocea GN=mx PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.799e-21 Identity = 49/120 (40.83%), Postives = 79/120 (65.83%), Query Frame = 3 Query: 45 SEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 +++ ++I+ DK AG ++D I L+I SP V D+TL+ LPGI +V V +QP +I +I+ +I +IK+ + L V P N D+A ++AL++A DPDG RT+ I+TK D++ +GT Sbjct: 100 ADVEKKIREAQDKMAGNGVEIADDLISLEIASPDVPDLTLIALPGIARVAVKKQPENIGDQIKRLIQKFIKKQETINLVVVPCNMDIATTEALKMAQEVDPDGERTLVILTKPDLVKKGT 219
BLAST of CB250308 vs. ExPASy Swiss-Prot
Match: MX2_BUBBU (Interferon-induced GTP-binding protein Mx2 OS=Bubalus bubalis GN=MX2 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.799e-21 Identity = 55/123 (44.72%), Postives = 80/123 (65.04%), Query Frame = 3 Query: 45 SEIRREIQAQTDKEAGGNKGVSDKQIRLKIFSPHVLDITLVDLPGITKVPVGEQPADIEARIRTMIMSYIKQPSCLILAVTPANSDLAN---SDALQIAGIADPDGYRTIGIITKLDIMDRGT 404 SE+ EI+ + AG +G+S + I L++ SP V D+TL+DLPGIT+V V QP DI +I+ +I I++ + L V P N D+A ++AL +A DPDG RTIGI+TK D++D+GT Sbjct: 180 SEVEWEIRRAQNIIAGNGRGISHELINLEVTSPDVPDLTLIDLPGITRVAVENQPQDIGLQIKALI---IQRQETINLVVVPCNVDIATKKYTEALSMAQEVDPDGDRTIGILTKPDLVDKGT 299 The following BLAST results are available for this feature:
BLAST of CB250308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250308 ID=CB250308; Name=CB250308; organism=Citrus sinensis; type=EST; length=436bpback to top |