CB250317

Overview
NameCB250317
Unique NameCB250317
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length485
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AT2L1_XENLA (Alanine--glyoxylate aminotransferase 2-like 1 OS=Xenopus laevis GN=agxt2l1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.374e-29
Identity = 76/174 (43.68%), Postives = 100/174 (57.47%), Query Frame = 2
Query:    2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVV-----QTGVHHALNPDPYRGVFGAD----GEMYAKDVQDLIDFGTSG--HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG--VVPDIVTMAKGIGNGIPLGAVVTT 484
            AR YTG  D+I+L +AYHG+    +     S +KF+ +     +  +H A +PD YRG +  D       YAKDV+D+I         +A F++ES+Q  GG I    GY   V + + KAGG+ IADEVQ GF R G HFW F+  G   +PDIVTM K IGNG P+  VVTT
Sbjct:  123 ARQYTGHQDVITLDHAYHGHVTSLIDI---SPYKFHQLGKDAQKEYIHVAPSPDTYRGKYREDHPDPASAYAKDVEDIIQKAHQNKRQIAAFIAESMQSCGGQIIPPAGYFQKVSEFVHKAGGVFIADEVQVGFGRVGKHFWSFQLQGEDFLPDIVTMGKPIGNGHPMSCVVTT 293          
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AT2L1_MOUSE (Alanine--glyoxylate aminotransferase 2-like 1 OS=Mus musculus GN=Agxt2l1 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 6.466e-27
Identity = 75/173 (43.35%), Postives = 101/173 (58.38%), Query Frame = 2
Query:    2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF----NVVQTGVHHALNPDPYRGVFGADGE----MYAKDVQDLIDFGTSG--HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG--VVPDIVTMAKGIGNGIPLGAVVTT 484
            AR + G  D+I+L +AYHG+ +  +     S +KF    +V +  VH A  PD YRG +  D E     YA +V+ +I+   S    +A F++ES+Q  GG I    GY   V + I KAGG+ IADEVQ GF R G +FW F+ +G   VPDIVTM K +GNG P+  VVTT
Sbjct:  123 ARQFRGHQDVITLDHAYHGHLSSLIEI---SPYKFQKGKDVKRETVHVAPAPDTYRGKYREDHEDPSTAYADEVKKIIEEAHSSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEHIHKAGGVFIADEVQVGFGRVGRYFWSFQMYGEDFVPDIVTMGKPMGNGHPISCVVTT 292          
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AT2L1_BOVIN (Alanine--glyoxylate aminotransferase 2-like 1 OS=Bos taurus GN=AGXT2L1 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.441e-26
Identity = 73/173 (42.20%), Postives = 99/173 (57.23%), Query Frame = 2
Query:    2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF----NVVQTGVHHALNPDPYRGVFGAD----GEMYAKDVQDLID--FGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG--VVPDIVTMAKGIGNGIPLGAVVTT 484
            AR + G  D+I+L +AYHG+ +  +     S +KF    +V +  VH A  PD YRG +  D       YA +V+ +ID    +   +A F++ES+Q  GG I    GY   V + ++ AGG+ IADEVQ GF R G HFW F+  G   VPDIVTM K +GNG P+  VVTT
Sbjct:  123 ARQFRGHQDVITLDHAYHGHLSSLIEI---SPYKFQKGKDVKKEFVHVAPAPDTYRGKYREDHVDPASAYADEVKKIIDEAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVRGAGGVFIADEVQVGFGRVGKHFWSFQMFGEDFVPDIVTMGKPMGNGHPMACVVTT 292          
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AT2L1_HUMAN (Alanine--glyoxylate aminotransferase 2-like 1 OS=Homo sapiens GN=AGXT2L1 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.881e-26
Identity = 75/173 (43.35%), Postives = 100/173 (57.80%), Query Frame = 2
Query:    2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKF----NVVQTGVHHALNPDPYRGVFGAD----GEMYAKDVQDLI-DFGTSGH-VAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG--VVPDIVTMAKGIGNGIPLGAVVTT 484
            AR + G  D+I+L +AYHG+ +  +     S +KF    +V +  VH A  PD YRG +  D       YA +V+ +I D   SG  +A F++ES+Q  GG I    GY   V + +  AGG+ IADEVQ GF R G HFW F+ +G   VPDIVTM K +GNG P+  VVTT
Sbjct:  123 ARQFRGHQDVITLDHAYHGHLSSLIEI---SPYKFQKGKDVKKEFVHVAPTPDTYRGKYREDHADSASAYADEVKKIIEDAHNSGRKIAAFIAESMQSCGGQIIPPAGYFQKVAEYVHGAGGVFIADEVQVGFGRVGKHFWSFQMYGEDFVPDIVTMGKPMGNGHPVACVVTT 292          
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AT2L2_MOUSE (Alanine--glyoxylate aminotransferase 2-like 2 OS=Mus musculus GN=Agxt2l2 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 5.474e-26
Identity = 68/169 (40.24%), Postives = 90/169 (53.25%), Query Frame = 2
Query:    2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGAD----GEMYAKDVQDLIDFGTSG--HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG--VVPDIVTMAKGIGNGIPLGAVVTT 484
            AR YTG  D++ L +AYHG+ +  +  +          +  VH A  PD YRG +  D     E YA +V+ +I         +A F +ES+  V G I    GY   V + I +AGGL +ADE+Q GF R G HFW F+  G   VPDIVTM K IGNG P+  + TT
Sbjct:  124 ARQYTGHQDVVVLDHAYHGHLSSLIDISPYKFRNLGGQKEWVHVAPLPDTYRGPYREDHPNPAEAYANEVKHVISSAQQKGRKIAAFFAESLPSVSGQIIPPAGYFSQVAEHIHRAGGLFVADEIQVGFGRIGKHFWAFQLEGEDFVPDIVTMGKSIGNGHPVACMATT 292          
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: AT2L2_HUMAN (Alanine--glyoxylate aminotransferase 2-like 2 OS=Homo sapiens GN=AGXT2L2 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 7.149e-26
Identity = 67/169 (39.64%), Postives = 91/169 (53.85%), Query Frame = 2
Query:    2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGAD----GEMYAKDVQDLIDFGTSG--HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHG--VVPDIVTMAKGIGNGIPLGAVVTT 484
            AR YTG  D++ L +AYHG+ +  +  +       +  +  VH A  PD YRG +  D       YA +V+ ++         +A F +ES+  VGG I    GY   V + I+KAGG+ +ADE+Q GF R G HFW F+  G   VPDIVTM K IGNG P+  V  T
Sbjct:  124 ARHYTGHQDVVVLDHAYHGHLSSLIDISPYKFRNLDGQKEWVHVAPLPDTYRGPYREDHPNPAMAYANEVKRVVSSAQEKGRKIAAFFAESLPSVGGQIIPPAGYFSQVAEHIRKAGGVFVADEIQVGFGRVGKHFWAFQLQGKDFVPDIVTMGKSIGNGHPVACVAAT 292          
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_LISMF (Acetylornithine aminotransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=argD PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.543e-20
Identity = 62/159 (38.99%), Postives = 85/159 (53.46%), Query Frame = 2
Query:    2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478
            AR YTG   II+   ++HG   G+M ATAQ+  K +    G+       PY  +     E +  ++ +        H A  + E IQG GG+I     +L  V    KK G L I DEVQ G  RTG+  +GFE  G+ PDI T+AKG+GNG+P+GA+V
Sbjct:  105 ARKYTGKEKIITFEKSFHGRTFGSMSATAQA--KIHQGFGGLVPGFTYVPYNDI-----EAFRAEIDE--------HTAAVMLEVIQGEGGVIPANAAFLLEVQLLCKKMGVLLIIDEVQTGLGRTGT-LYGFEQIGLEPDIFTLAKGLGNGLPIGAMV 247          
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: YHXA_BACSU (Uncharacterized aminotransferase yhxA OS=Bacillus subtilis GN=yhxA PE=3 SV=4)

HSP 1 Score: 97.8265 bits (242), Expect = 2.631e-20
Identity = 62/150 (41.33%), Postives = 81/150 (54.00%), Query Frame = 2
Query:   32 ISLRNAYHGNAAGTMGAT--AQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGA 472
            IS   AYHGN  G + AT  AQ  +K+  +  G  HA  PD YR    AD    A ++  ++ +  S  +AG + E I   GGI+    GY+  V    ++ G L I DEV  GF RTG  F GF  +GV PDI+TMAKGI +  +PL A
Sbjct:  146 ISRYRAYHGNTLGALSATGQAQRKYKYEPLSQGFLHAAPPDIYRNPDDADTLESANEIDRIMTWELSETIAGVIMEPIITGGGILMPPDGYMKKVEDICRRHGALLICDEVICGFGRTGEPF-GFMHYGVKPDIITMAKGITSAYLPLSA 294          
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: DGDA_BURCE (2,2-dialkylglycine decarboxylase OS=Burkholderia cepacia GN=dgdA PE=1 SV=3)

HSP 1 Score: 94.3597 bits (233), Expect = 2.909e-19
Identity = 63/167 (37.72%), Postives = 90/167 (53.89%), Query Frame = 2
Query:    2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDP--YRGVFGADGEM-YAKDVQ---DLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484
            A+L TG  +I+    ++HG       AT  +  K  V    V     P P  YR  F  +G   Y  ++    DLID  +SG++A F++E I   GGIIEL  GY+ A+ +  +  G L I DE Q G  RTG+ F   +  GV PDI+T++K +G G+PL A+VT+
Sbjct:  122 AKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRK-GVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMF-ACQRDGVTPDILTLSKTLGAGLPLAAIVTS 286          
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: DAT_HAEIN (Diaminobutyrate--2-oxoglutarate aminotransferase OS=Haemophilus influenzae GN=dat PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.465e-19
Identity = 62/166 (37.35%), Postives = 85/166 (51.20%), Query Frame = 2
Query:    2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNV--VQTGVHHALNPDPYRGVFGADGEMYAKDVQ----DLIDFGTSGHV--AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAV 475
            A+ YTG  +II+    +HG   G +  T     K  V  +  GV     P  YR  FG  GE  AK V+    + I+   SG V  A  + E+IQG GG++     +L  V +  +K G L I DEVQAGF R+G  F  FE  G+ PDI+ M+K +G  +PL  +
Sbjct:  134 AKTYTGRGNIIAFSGGFHGMTQGALALTGNLGAKNAVENLMPGVQFMPYPHEYRCPFGIGGEAGAKAVEQYFENFIEDVESGVVKPAAVILEAIQGEGGVVSAPISFLQKVREVTQKHGILMIVDEVQAGFCRSGRMF-AFEHAGIEPDIIVMSKAVGGSLPLAVL 298          
The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 236
Match NameE-valueIdentityDescription
AT2L1_XENLA2.374e-2943.68Alanine--glyoxylate aminotransferase 2-like 1 OS=X... [more]
AT2L1_MOUSE6.466e-2743.35Alanine--glyoxylate aminotransferase 2-like 1 OS=M... [more]
AT2L1_BOVIN1.441e-2642.20Alanine--glyoxylate aminotransferase 2-like 1 OS=B... [more]
AT2L1_HUMAN1.881e-2643.35Alanine--glyoxylate aminotransferase 2-like 1 OS=H... [more]
AT2L2_MOUSE5.474e-2640.24Alanine--glyoxylate aminotransferase 2-like 2 OS=M... [more]
AT2L2_HUMAN7.149e-2639.64Alanine--glyoxylate aminotransferase 2-like 2 OS=H... [more]
ARGD_LISMF1.543e-2038.99Acetylornithine aminotransferase OS=Listeria monoc... [more]
YHXA_BACSU2.631e-2041.33Uncharacterized aminotransferase yhxA OS=Bacillus ... [more]
DGDA_BURCE2.909e-1937.722,2-dialkylglycine decarboxylase OS=Burkholderia c... [more]
DAT_HAEIN8.465e-1937.35Diaminobutyrate--2-oxoglutarate aminotransferase O... [more]

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Properties
Property NameValue
Genbank descriptionEST0102 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ143 similar to putative aminotransferase (acc# NP_187498), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bp
GGCAAGATTATATACCGGATGCAATGACATAATATCACTGAGAAACGCCT
ATCATGGAAACGCAGCTGGAACTATGGGTGCCACTGCTCAGTCCAACTGG
AAATTTAACGTTGTTCAGACTGGCGTTCATCATGCCTTGAACCCCGACCC
ATACAGAGGCGTGTTTGGTGCGGATGGCGAAATGTATGCTAAAGATGTTC
AAGATCTCATTGACTTTGGAACTTCTGGGCATGTTGCTGGTTTCCTTTCT
GAATCTATTCAGGGAGTGGGTGGCATTATAGAGTTGGCCCCAGGTTACCT
GCCTGCGGTTTATAAAAGCATTAAGAAAGCGGGAGGCCTTTGTATAGCTG
ATGAGGTTCAGGCTGGATTTGCCCGAACAGGGAGCCATTTCTGGGGATTT
GAGGCCCATGGTGTTGTTCCTGACATTGTGACAATGGCAAAGGGCATTGG
AAATGGTATCCCCCTTGGTGCAGTAGTAACTACTC
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