CB250317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_STAEQ (Acetylornithine aminotransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=argD PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.680e-14 Identity = 52/161 (32.30%), Postives = 81/161 (50.31%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNW--KFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 AR TG ++II+ + ++HG G M AT Q +F V G A+ D F + + TS + A + E IQG G++ ++ + + K+ L I DEVQ G RTG + E + + PDI+T+AKG+GNG+P+GA++ Sbjct: 104 ARKATGKSEIIAFKKSFHGRTYGAMSATGQKKITDQFGPVVPGFKFAIFND-----FNSFKSL------------TSNNTAAVIIEIIQGESGVLPADSLFMKQLNEYCKQKDILIIVDEVQTGIGRTGK-LYAHEHYQLSPDIITLAKGLGNGLPIGAML 246
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_METJA (Acetylornithine aminotransferase OS=Methanocaldococcus jannaschii GN=argD PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 3.680e-14 Identity = 55/151 (36.42%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 26 DIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 +IIS+ NA+HG T+ AT + + Q G + P ++ V D E + + D A + E +QG GGI YL AV + I DEVQ G RTG F FE +GV PDI+T+AK +G G+P+GAVV Sbjct: 130 EIISMYNAFHGRTLTTLAATPKPKY-----QDGFYPL--PPGFKYVPFNDIEALKEAITD--------KTAAIMIEPVQGEGGIHVADKDYLKAVRDLCDDKNIVLIFDEVQCGMGRTGRMF-AFEHYGVEPDILTLAKALGGGVPIGAVV 264
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_THEMA (Acetylornithine aminotransferase OS=Thermotoga maritima GN=argD PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.807e-14 Identity = 49/150 (32.67%), Postives = 74/150 (49.33%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 I+S N++HG G++ AT Q ++ P+ + +V+DL + A FL E IQG GI+ +L K + L + DEVQ G RTG F ++ +GVVPD++T AKG+G G+P+GAV+ Sbjct: 119 ILSAHNSFHGRTLGSLTATGQPKYQ--------------KPFEPLVPGFEYFEFNNVEDLRRKMSEDVCAVFL-EPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLF-AYQKYGVVPDVLTTAKGLGGGVPIGAVI 252
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALTY (Putrescine aminotransferase OS=Salmonella typhimurium GN=patA PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALTI (Putrescine aminotransferase OS=Salmonella typhi GN=patA PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALSV (Putrescine aminotransferase OS=Salmonella schwarzengrund (strain CVM19633) GN=patA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALPK (Putrescine aminotransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=patA PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALPB (Putrescine aminotransferase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=patA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALPA (Putrescine aminotransferase OS=Salmonella paratyphi A GN=patA PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALNS (Putrescine aminotransferase OS=Salmonella newport (strain SL254) GN=patA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315 The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bpback to top |