CB250317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALHS (Putrescine aminotransferase OS=Salmonella heidelberg (strain SL476) GN=patA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALG2 (Putrescine aminotransferase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=patA PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALEP (Putrescine aminotransferase OS=Salmonella enteritidis PT4 (strain P125109) GN=patA PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALDC (Putrescine aminotransferase OS=Salmonella dublin (strain CT_02021853) GN=patA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALAR (Putrescine aminotransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=patA PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHAL--NPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H N + R F ++G+ T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVTFGNINAMRMAF-SEGKK------------TGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALA4 (Putrescine aminotransferase OS=Salmonella agona (strain SL483) GN=patA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_CITK8 (Putrescine aminotransferase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=patA PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 56/154 (36.36%), Postives = 76/154 (49.35%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G++ ATA+S ++ F + G H P+ G + A T VA + E IQG GG+I GYL AV K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGSLSATAKSTFRKPFMPLLPGFRHV----PF-------GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPQGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPVGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ECTB_VIBCH (Diaminobutyrate--2-oxoglutarate transaminase OS=Vibrio cholerae GN=ectB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 53/165 (32.12%), Postives = 88/165 (53.33%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADG-EMYAKDVQDLIDFGTSG--HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGI-GNGIPLGAVV 478 AR TG +++++ N +HG + G + AT + + + +GV+ PY G G DG ++ +QD +SG A L E++QG GG+ + +L V + L I D++QAG RTG+ F+ FE G+ PD+VT++K + G G+P+ V+ Sbjct: 120 ARKVTGRHNVVTFTNGFHGCSLGALAATGNQHHRQGAGLALSGVYRV----PYDGYAGVDGLTLFETMLQD----NSSGLDKPAAVLLETVQGEGGLNVASDAWLQRVQAICRAQQILLIVDDIQAGCGRTGT-FFSFEPSGIEPDMVTLSKSLSGYGLPMALVL 275
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_STRCL (Acetylornithine aminotransferase OS=Streptomyces clavuligerus GN=argD PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 53/157 (33.76%), Postives = 77/157 (49.04%), Query Frame = 2 Query: 14 TGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 TG + I++ ++ +HG G++ T Q + F + V H PY D E V + A + E IQG G++ GYL A + + G L + DEVQ G RTG H++ +A GV D+VT+AKG+G G+PLGA V Sbjct: 120 TGRSRIVAAQSGFHGRTMGSLALTGQPAKREPFLPLPGDVTHV----PY-----GDAEALRAAVTE--------DTAMVILEPIQGESGVVVPPKGYLRAAREITEATGTLLVLDEVQTGIGRTG-HWFAAQAEGVEADVVTLAKGLGGGLPLGAAV 258
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_SCHPO (Probable acetylornithine aminotransferase, mitochondrial OS=Schizosaccharomyces pombe GN=arg1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.278e-14 Identity = 52/163 (31.90%), Postives = 78/163 (47.85%), Query Frame = 2 Query: 17 GCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVV-----PDIVTMAKGIGNGIPLGAVVTT 484 G + I+ N++HG + G++ TA +K F + V A+ DP A E + D A + E +QG GGI P +L A+ K+ K G I DE+Q G R+G W AH +V PDI+T+AK + NG+P+GA + + Sbjct: 167 GKSQIVYFNNSFHGRSLGSLSITANPKYKRGFQPLLPDVVQAVYNDP------ASIEQFVND-----------KTAAVIVEPVQGEGGICPAKPEFLIALRKACDKVGASLIYDEIQCGLGRSGD-LW---AHSIVKDVASPDIITVAKPLANGLPIGATIVS 308 The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bpback to top |