CB250317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_THET2 (Acetylornithine/acetyl-lysine aminotransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=argD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.199e-14 Identity = 47/159 (29.56%), Postives = 74/159 (46.54%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 AR +TG ++ + G G++ T + ++ + +P + D E + V + A + E +QG GG+ P +L A + ++ G L I DE+Q G RTG F FE G+VPDI+T+AK +G G+PLG V Sbjct: 124 ARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPL-------VEPVEFIPYNDVEALKRAVDE--------ETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDILTLAKALGGGVPLGVAV 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_THEEB (Acetylornithine aminotransferase OS=Thermosynechococcus elongatus (strain BP-1) GN=argD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.199e-14 Identity = 51/152 (33.55%), Postives = 75/152 (49.34%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 II+ + ++HG T+ AT Q ++ F+ + G + PY + + + + D VA L E +QG GG+ Y V + + G L I DEVQ G RTGS WG+E GV PDI T AKG+ G+P+GA++ Sbjct: 135 IITAQASFHGRTLATITATGQPKYQKYFDPLVPGFAYV----PYNDLGALEALVASLDQPQ-------PQVAAILLEPLQGEGGVRPGDRAYFEQVRQLCTEKGILLIFDEVQVGMGRTGS-LWGYETLGVEPDIFTSAKGLAGGVPIGAMI 274
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_PYRAE (Acetylornithine/acetyl-lysine aminotransferase OS=Pyrobaculum aerophilum GN=argD PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 8.199e-14 Identity = 51/150 (34.00%), Postives = 70/150 (46.67%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 I++ N++HG G++ T +K L P G F E V LI T V E IQG GG+ P +L A+ + ++ G L I DEVQ GF RTG+ W F+ +GV PDI T K + G+P+G V Sbjct: 117 IVAFTNSFHGRTMGSLSITWNEKYK------KAFEPLYPHVRFGKFNVPHE-----VDKLIGEDTCCVVV----EPIQGEGGVNPATPEFLKALREEAQRKGALLIFDEVQTGFGRTGA-VWAFQKYGVEPDIFTAGKPVAGGLPIGLAV 250
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: GABT_BACSU (Probable 4-aminobutyrate aminotransferase OS=Bacillus subtilis GN=gabT PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.071e-13 Identity = 55/167 (32.93%), Postives = 82/167 (49.10%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSN---WKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDV-QDLIDFGTSG----HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 AR YT ++S +HG TM T++ + F V+ A P Y+ G E Y V Q DF + VA + E +QG GG I + ++ V K+ G + +ADE+Q GFARTG++F E VVPD++T++K + G+PL V+ Sbjct: 128 ARKYTKRQGVVSFTRGFHGRTNMTMSMTSKVKPYKFGFGPFAPEVYQAPFPYYYQKPAGMSDESYDDMVIQAFNDFFIASVAPETVACVVMEPVQGEGGFIIPSKRFVQHVASFCKEHGIVFVADEIQTGFARTGTYF-AIEHFDVVPDLITVSKSLAAGLPLSGVI 293
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_YERP3 (Succinylornithine transaminase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=astC PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.071e-13 Identity = 48/156 (30.77%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 23 NDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 N I++ RNA+HG T+ A Q + F + G+HH + D A E D + E IQG GG++ +L + + L I DE+Q G RTG + + +GV PD++T AK +G G P+GA++TT Sbjct: 137 NQIVAFRNAFHGRTLFTVSAGGQPKYSQDFAPLPGGIHHGIFNDL------ASAEQLITD-----------QTCAVIVEPIQGEGGVLPADKEFLHGLRALCDRHNALLIFDEIQTGVGRTGE-LYAYMHYGVSPDVLTSAKALGGGFPIGAMLTT 274
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_CHLTE (Acetylornithine aminotransferase OS=Chlorobium tepidum GN=argD PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.071e-13 Identity = 46/155 (29.68%), Postives = 78/155 (50.32%), Query Frame = 2 Query: 14 TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 T ++SL N +HG G + TA+ + D + + G + DV+DL + S A E +QG GGI +++ ++ + + K+ L +ADE+QAG RTG+ F+ + + PD+V +AK +G G+PLGA++ Sbjct: 127 TDKTQVLSLTNCFHGRTYGALSLTAKPKYV--------------DGFEPLVPETGMIDFNDVEDL-ERKVSNRTAAVFVEFVQGEGGIHKVSEAFIAKLKELAKEHDFLIVADEIQAGCGRTGA-FFSYMPFDIQPDLVCVAKPLGGGLPLGAII 265
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_ANASP (Acetylornithine aminotransferase OS=Anabaena sp. (strain PCC 7120) GN=argD PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.071e-13 Identity = 51/153 (33.33%), Postives = 78/153 (50.98%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVT 481 I++ ++HG T+ AT Q+ ++ F+ + G H+ +N + V A E+ D + VA L E +QG GG+ Y + + G L + DEVQ G R+G WG+E GV PDI T AKG+G GIP+GA+++ Sbjct: 150 ILTANASFHGRTLATITATGQAKYQKYFDPLVPGFHY-VNYNDISAVEAAISELDEGDYR----------VAAILIEPLQGEGGVRPGDVEYFQKLRQICDDTGILLMFDEVQVGMGRSGK-LWGYEYLGVEPDIFTSAKGLGGGIPIGAMMS 290
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALPC (Putrescine aminotransferase OS=Salmonella paratyphi C (strain RKS4594) GN=patA PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 1.399e-13 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSIFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_SALCH (Putrescine aminotransferase OS=Salmonella choleraesuis GN=patA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.399e-13 Identity = 54/154 (35.06%), Postives = 75/154 (48.70%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ G + A + T +A + E IQG GG+I GYL V K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSIFRRPFMPLLPGFRHV----PF-------GNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_PSEPK (Acetylornithine aminotransferase OS=Pseudomonas putida (strain KT2440) GN=argD PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.399e-13 Identity = 49/156 (31.41%), Postives = 74/156 (47.44%), Query Frame = 2 Query: 23 NDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 ++II+ N++HG T+ Q + F TG+ H PY + ++ K +I E IQG G++ YL K + L I DEVQ G RTGS + ++ +GV+PDI+T AK +G G P+GA++TT Sbjct: 132 HEIIATVNSFHGRTLFTVSVGGQPKYSDGFGPKITGISHV----PYNDLEALKAQISDKTCAVVI-------------EPIQGESGVVPADKAYLEGARKLCDEHNALLIFDEVQTGVGRTGS-LYAYQHYGVIPDILTSAKSLGGGFPIGAMLTT 269 The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bpback to top |