CB250317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD2_BORPA (Acetylornithine aminotransferase 2 OS=Bordetella parapertussis GN=argD2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.116e-13 Identity = 51/154 (33.12%), Postives = 74/154 (48.05%), Query Frame = 2 Query: 17 GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 G II++ + +HG TM A+ + W T + P + D V+ LID T + E +QG G+I ++ + K + G L I DEVQ G RTGS F ++ V+PDI+T+AKGIG GIPL A++ Sbjct: 123 GAYKIITMNHGFHGRTLATMSASGKPGW-----DTMFAPQVEGFPKAEINDLDS------VRALIDAQT----VAVMLEPVQGEAGVIPATREFMQGLRKLADEHGILFIVDEVQTGMGRTGSLF-AYQQFDVIPDIMTLAKGIGGGIPLAALL 260
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD2_BORBR (Acetylornithine aminotransferase 2 OS=Bordetella bronchiseptica GN=argD2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.116e-13 Identity = 51/154 (33.12%), Postives = 74/154 (48.05%), Query Frame = 2 Query: 17 GCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 G II++ + +HG TM A+ + W T + P + D V+ LID T + E +QG G+I ++ + K + G L I DEVQ G RTGS F ++ V+PDI+T+AKGIG GIPL A++ Sbjct: 123 GAYKIITMNHGFHGRTLATMSASGKPGW-----DTMFAPQVEGFPKAEINDLDS------VRALIDAQT----VAVMLEPVQGEAGVIPATREFMQGLRKLADEHGILFIVDEVQTGMGRTGSLF-AYQQFDVIPDIMTLAKGIGGGIPLAALL 260
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: Y4UB_RHISN (Uncharacterized aminotransferase y4uB OS=Rhizobium sp. (strain NGR234) GN=NGR_a01380 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.314e-13 Identity = 54/161 (33.54%), Postives = 79/161 (49.07%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWKFN-------VVQTGVHH---ALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNG-IPLGAVV 478 IIS YHG + + T S + + + TGV H NP F A A ++ ++I+ +V F++E + G GGI GY A+ +KK L IADEV GF RTGS F G + +G+ PD++T+AKG+ + PL A + Sbjct: 147 IISRERGYHGCSVVSGSMTGMSFYHDHMDLPLPQICHTGVPHHYWGANPGETEREFSA---RRAAELDEMIETLGPDNVGAFIAEPVLGTGGITPPPEGYWEAIQAVLKKHDVLLIADEVITGFGRTGSMF-GSQHYGIEPDLITVAKGLTSAYFPLSASI 303
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: Y4QG_RHISN (Uncharacterized aminotransferase y4qG OS=Rhizobium sp. (strain NGR234) GN=NGR_a01910 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.314e-13 Identity = 52/163 (31.90%), Postives = 82/163 (50.31%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHV-AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGI-GNGIPLGAVV 478 AR TG + I+S N +HG + G + T ++ GV PY G +GAD + + L D + V A + E++QG GGI +L ++ + + G L I D++QAG R G +F+ FE G+ PD+V ++K I G G+PL ++ Sbjct: 153 ARKATGRHSIVSFTNGFHGMSLGALAVTGNRYYRDAAGFPPAGVAFM----PYDGYWGADNDTSEYLDKVLADASSGVDVPAAIILETVQGEGGINAARKEWLQSIQRICRSHGILLIVDDIQAGCGRAG-NFFSFEFAGLSPDVVVLSKSISGCGLPLSLLL 310
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ECTB_VIRPA (Diaminobutyrate--2-oxoglutarate transaminase OS=Virgibacillus pantothenticus GN=ectB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.314e-13 Identity = 53/157 (33.76%), Postives = 85/157 (54.14%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHV-AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGN-GIPL 466 AR TG + +IS NA+HG G++ T S +K + +HH+++ + V D Y + + L D G+ + A + E++QG GGI + +L + ++ L I D+VQAG RTG+ F+ FE G+ PDIV ++K IG G+P+ Sbjct: 120 ARKVTGRDTVISFTNAFHGMTIGSLSVTGNS-FKRHGAGVPLHHSVSMPYDKYVNDQDSIAYLE--RFLEDSGSGVALPAAIILETVQGEGGINAASIEWLQKIASICERWDILLIIDDVQAGCGRTGT-FFSFEPAGIAPDIVCLSKSIGGIGLPM 272
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SALPB (Succinylornithine transaminase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=astC PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.314e-13 Identity = 48/154 (31.17%), Postives = 72/154 (46.75%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q ++ F + + HA D LID T + E +QG GG+I +L + + + L I DEVQ G RTG + + +GV PDI+T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPSYSQDFAPLPPDIRHAAYND-------------LNSASALIDDNTCAVIV----EPVQGEGGVIPATKAFLQGLRELCDRHQALLIFDEVQTGVGRTGE-LYAYMHYGVTPDILTTAKALGGGFPIGAMLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SALTY (Succinylornithine transaminase OS=Salmonella typhimurium GN=astC PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E +QG GG+I +L + + + L I DEVQ G RTG + + +GV PDI+T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRHAAYND-------------LNSASALIDDNTCAVIV----EPVQGEGGVIPATKAFLQGLRELCDRHQALLIFDEVQTGVGRTGE-LYAYMHYGVTPDILTTAKALGGGFPIGAMLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SALPK (Succinylornithine transaminase OS=Salmonella paratyphi A (strain AKU_12601) GN=astC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E +QG GG+I +L + + + L I DEVQ G RTG + + +GV PDI+T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRHAAYND-------------LNSASALIDDNTCAVIV----EPVQGEGGVIPATKAFLQGLRELCDRHQALLIFDEVQTGVGRTGK-LYAYMHYGVTPDILTTAKALGGGFPIGAMLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SALPC (Succinylornithine transaminase OS=Salmonella paratyphi C (strain RKS4594) GN=astC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E +QG GG+I +L + + + L I DEVQ G RTG + + +GV PDI+T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRHAAYND-------------LNSASALIDDNTCAVIV----EPVQGEGGVIPATKAFLQGLRELCDRHQALLIFDEVQTGVGRTGE-LYAYMHYGVTPDILTTAKALGGGFPIGAMLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SALPA (Succinylornithine transaminase OS=Salmonella paratyphi A GN=astC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.941e-13 Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E +QG GG+I +L + + + L I DEVQ G RTG + + +GV PDI+T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRHAAYND-------------LNSASALIDDNTCAVIV----EPVQGEGGVIPATKAFLQGLRELCDRHQALLIFDEVQTGVGRTGK-LYAYMHYGVTPDILTTAKALGGGFPIGAMLTT 266 The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bpback to top |