CB250317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ECTB_OCEIH (Diaminobutyrate--2-oxoglutarate transaminase OS=Oceanobacillus iheyensis GN=ectB PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.065e-13 Identity = 53/158 (33.54%), Postives = 84/158 (53.16%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHV--AGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGN-GIPL 466 AR TG + +I NA+HG G++ T S +K N ++HA++ + V D Y ++ ++ SG A F+ E++QG GGI ++ + + +K L I D+VQAG RTG+ F+ FE G+ PDIV ++K IG G+P+ Sbjct: 131 ARKVTGRDTVIGFTNAFHGMTIGSLSVTGNS-FKRNGAGIPLNHAISMPFDQYVDEQDSIAY---IERFLEDSGSGVALPAAFILETVQGEGGINAARLEWVKKIEEICRKWDILLIIDDVQAGCGRTGT-FFSFEEAGINPDIVCLSKSIGGVGLPM 283
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SALTI (Succinylornithine transaminase OS=Salmonella typhi GN=astC PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 9.065e-13 Identity = 48/154 (31.17%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E +QG GG+I +L + + + L I DEVQ G RTG + + +GV PDI+T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPTYSQDFAPLPPDIRHAAYND-------------LNSASALIDDNTCAVIV----EPVQGEGGVIPATNAFLQGLRELCDRHQALLIFDEVQTGVGRTGE-LYAYMHYGVTPDILTTAKALGGGFPIGAMLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PUUE_ECOLI (4-aminobutyrate aminotransferase OS=Escherichia coli (strain K12) GN=puuE PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.184e-12 Identity = 51/167 (30.54%), Postives = 76/167 (45.51%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTM---GATAQSNWKFNVVQTGVHHALNPDPYRGVFGADG-----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 AR +TG +I+ +HG TM G A F V+H P G+ D ++ D++ + VA + E +QG GG + A+ + + G + IADEVQ+GFARTG F + + PD++TMAK + G+PL VV Sbjct: 121 ARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIE-------AKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLF-AMDHYADKPDLMTMAKSLAGGMPLSGVV 279
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ECTB_VIBPA (Diaminobutyrate--2-oxoglutarate transaminase OS=Vibrio parahaemolyticus GN=ectB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.184e-12 Identity = 49/162 (30.25%), Postives = 84/162 (51.85%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG--HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGN-GIPLGAVV 478 A+ G + +++ N +HG AG + AT + + + + + P+ G G DG + +++ ++G A L E++QG GG+ + +L + K K L I D++QAG RTG+ F+ FE G+ PDIVT++K IG G+P+ V+ Sbjct: 120 AKKVKGRSSVVAFTNGFHGCTAGALAATGNQHHRQGNGSSLTN--VTRIPFEGYAGVDGLAL---FETMLNDNSAGMDKPAAVLLETVQGEGGLNAASNEWLQRLSKICKANDILLIVDDIQAGCGRTGT-FFSFEPSGIEPDIVTLSKSIGGYGLPMAVVL 275
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_HAEDU (Acetylornithine aminotransferase OS=Haemophilus ducreyi GN=argD PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.184e-12 Identity = 49/150 (32.67%), Postives = 68/150 (45.33%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQS--NWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGA 472 IISL N++HG T+ AT Q + F G H + A D+ + + E +QG GG+ L YL AV + L I DEVQ G RTG+ F ++ + PDIVT+AKG+ G+P+GA Sbjct: 131 IISLVNSFHGRTISTLAATGQKLFHQHFFPFTAGFEHLI----------------ANDLNAFKTRIAQNDICAIILEVVQGEGGVCSLDQAYLQAVQGLCQVQDILLIIDEVQTGIGRTGTMF-AYQQFELKPDIVTLAKGLAGGLPIGA 263
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ECTB_STRAW (Diaminobutyrate--2-oxoglutarate transaminase OS=Streptomyces avermitilis GN=ectB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.546e-12 Identity = 53/157 (33.76%), Postives = 79/157 (50.32%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTS-GHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGI-GNGIPL 466 AR G I+S NA+HG + G++ T + + VH P P+ F + + L D G+ A + E++QG GGI P +L A+ + K+ L I D++Q G RTG+ F+ FE GV PDIVT++K I G G+P+ Sbjct: 127 ARKVKGREAIVSFTNAFHGMSLGSLAVTGNAFKRAGAGIPLVHGT--PMPFDNYFDGKVPDFLWFERLLEDQGSGLNKPAAVIVETVQGEGGINVARPEWLRALAELCKRQDMLLIVDDIQMGCGRTGA-FFSFEEAGVTPDIVTVSKSISGYGLPM 280
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SHISS (Succinylornithine transaminase OS=Shigella sonnei (strain Ss046) GN=astC PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.546e-12 Identity = 47/154 (30.52%), Postives = 72/154 (46.75%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E IQG GG++ + +L + + + L I DEVQ G RTG + + +GV PD++T AK +G G P+GA++TT Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRHAAYND-------------INSASALIDDATCAVIV----EPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTGE-LYAYMHYGVTPDLLTTAKALGGGFPVGALLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD1_BRAJA (Acetylornithine aminotransferase 1 OS=Bradyrhizobium japonicum GN=argD1 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.546e-12 Identity = 49/154 (31.82%), Postives = 69/154 (44.81%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNP--DPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 II+ A+HG T+ AT + + P D + V D E K + AG L E IQG GG+ P +L A+ + + G L DEVQ G RTG F GV PD++++AK +G G P+GA++ T Sbjct: 129 IITFEGAFHGRTLATLAATGSAKYL---------EGFGPPMDGFDQVPHGDIEAVKKAI--------GPQTAGILIEPIQGEGGVRSATPAFLKALRQLCDEKGLLLAFDEVQTGMGRTGDLF-AHRRTGVTPDVMSLAKALGGGFPIGAILAT 264
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: GABT_ECOLI (4-aminobutyrate aminotransferase OS=Escherichia coli (strain K12) GN=gabT PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.019e-12 Identity = 50/161 (31.06%), Postives = 75/161 (46.58%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSN---WKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAV 475 AR T + I+ AYHG T+ T + N ++ V+ AL P P G+ ++ + A + + +A + E +QG GG +P ++ + + G + IADEVQ+G RTG+ F E GV PD+ T AK I G PL V Sbjct: 122 ARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGI--SEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGVAPDLTTFAKSIAGGFPLAGV 279
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ECTB_MARHA (Diaminobutyrate--2-oxoglutarate transaminase OS=Marinococcus halophilus GN=ectB PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.019e-12 Identity = 50/158 (31.65%), Postives = 79/158 (50.00%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG--HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGI-GNGIPL 466 AR TG +++S N +HG G + T KF G+ + F + + +++ +D G SG A F+ E++QG GG+ + +L ++ K ++ I D+VQAG RTG+ F+ FE G+ PD V ++K I GNG PL Sbjct: 125 ARKVTGRTNVVSFTNGFHGMTIGALSVTGN---KFKRNGAGMPLSNTSTLPYDQFLKESNNSIEYIENFLDNGGSGLDKPAAFIVETVQGEGGLNAASSEWLRSIEKICRERDIKLILDDVQAGVGRTGT-FFSFEPAGIKPDFVCLSKSIGGNGSPL 278 The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bpback to top |