CB250317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_ECO8A (Succinylornithine transaminase OS=Escherichia coli O8 (strain IAI1) GN=astC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12 Identity = 46/154 (29.87%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E IQG GG++ + +L + + + L I DEVQ G RTG + + +GV PD++T AK +G G P+GA++ T Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYND-------------INSASALIDDSTCAVIV----EPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTG-ELYAYMHYGVTPDLLTTAKALGGGFPVGALLAT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_ECO24 (Succinylornithine transaminase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=astC PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12 Identity = 46/154 (29.87%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E IQG GG++ + +L + + + L I DEVQ G RTG + + +GV PD++T AK +G G P+GA++ T Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYND-------------INSASALIDDSTCAVIV----EPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTG-ELYAYMHYGVTPDLLTTAKALGGGFPVGALLAT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_YARLI (Acetylornithine aminotransferase, mitochondrial OS=Yarrowia lipolytica GN=ARG8 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12 Identity = 47/155 (30.32%), Postives = 70/155 (45.16%), Query Frame = 2 Query: 26 DIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 + ++ A+HG G + T ++ F + GV + DP DLI T G + E +QG GG+ + +L A+ + G + I DE+Q G RTG W + V PDI+TMAK +GNG P+GA + T Sbjct: 143 EFVNFEKAFHGRTMGALSVTPNPKYQAPFAPLVPGVKTGVYNDP--------------KAADLITEKTCGVIV----EPVQGEGGVYKANDEFLQALRNKCDEVGAMLIFDEIQCGLGRTG-RLWAHDK--VHPDILTMAKALGNGFPIGATMVT 276
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_SHEON (Acetylornithine aminotransferase OS=Shewanella oneidensis GN=argD PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.445e-12 Identity = 47/156 (30.13%), Postives = 71/156 (45.51%), Query Frame = 2 Query: 23 NDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 ++II+ A+HG T+ Q+ + F + H P+ V ++ S + E +QG GGII+ P +L AV + K L I DEVQ G RTG + + +VPDI+T AK +G G P+ A++TT Sbjct: 131 DEIIAFDKAFHGRTFFTVSVGGQAAYSDGFGPKPQSITHL----PFNDVAA-------------LEAAVSDKTCAIMLEPLQGEGGIIDADPAFLKAVRELANKHNALVIFDEVQTGVGRTG-ELYAYMGTDIVPDILTTAKALGGGFPIAAMLTT 268
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ECTB_NOCFA (Diaminobutyrate--2-oxoglutarate transaminase OS=Nocardia farcinica GN=ectB PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12 Identity = 54/162 (33.33%), Postives = 81/162 (50.00%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSG--HVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGN-GIPLGAVV 478 AR TG ++S NA+HG G + T + + VH A P Y G F + + ++ ++D +SG A + E++QG GGI +L + + + L I D+VQ G RTG F+ FE G+ PDIVT++K IG G+PL V+ Sbjct: 125 ARKVTGRETVLSFTNAFHGMTLGALSVTGNAAKRAGAGVPLVHAAHMP--YDGYFDNTTADF-QWMERVLDDTSSGFDRPAAVIVETVQGEGGINVARVEWLQHLAQLCAEREILLIVDDVQMGCGRTGP-FFSFEVAGITPDIVTLSKSIGGYGLPLALVL 282
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ECTB_BACPA (Diaminobutyrate--2-oxoglutarate transaminase OS=Bacillus pasteurii GN=ectB PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12 Identity = 54/161 (33.54%), Postives = 82/161 (50.93%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADG-----EMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGN-GIPL 466 AR TG +IIS NA+HG G++ + S+ + N + + ++ PY F E Y +D +D A + E++QG GGI + +L + K ++ L I D+VQAG RTG+ F+ FE G+ PDIV ++K IG G+PL Sbjct: 129 ARKVTGRQNIISFTNAFHGMTLGSLSISGNSSIR-NGAGVPLTNTISM-PYDTFFKNGNAIDYLEQYLEDTGSGVDLP-----AAMILETVQGEGGINAASFEWLRGIEKLCRRYDILLIIDDVQAGCGRTGT-FFSFEPAGIQPDIVCLSKSIGGYGLPL 281
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_ECO7I (Succinylornithine transaminase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=astC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12 Identity = 48/160 (30.00%), Postives = 74/160 (46.25%), Query Frame = 2 Query: 17 GCND--IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 GC+ I++ +NA+HG T+ A Q + F + + HA D LID T + E IQG GG++ + +L + + + L I DEVQ G RTG + + +GV PD++T AK +G G P+GA++ T Sbjct: 125 GCHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRHAAYND-------------INSASALIDDSTCAVIV----EPIQGEGGVVPASNAFLHGLRELCDRHNALLIFDEVQTGVGRTGE-LYAYMHYGVTPDLLTTAKALGGGFPVGALLAT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_CITK8 (Succinylornithine transaminase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=astC PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12 Identity = 47/162 (29.01%), Postives = 75/162 (46.30%), Query Frame = 2 Query: 5 RLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 R T + I++ +NA+HG T+ A Q + F + + HA+ D +LID T + E +QG GG++ +L + + + L I DEVQ G RTG + + +GV PD++T AK +G G P+GA++ T Sbjct: 123 RFGTHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRHAVYND-------------LNAASELIDDTTCAVIV----EPMQGEGGVLPATKAFLQGLRELCDRHNALLIFDEVQTGVGRTGE-LYAYMHYGVTPDLLTTAKALGGGFPIGALLAT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARUC_PSEAE (Succinylornithine transaminase/acetylornithine aminotransferase OS=Pseudomonas aeruginosa GN=aruC PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12 Identity = 46/155 (29.68%), Postives = 70/155 (45.16%), Query Frame = 2 Query: 26 DIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 +II+ N++HG T+ Q + F G+ H PY + + + S + E IQG GG++ YL K + L + DEVQ+G R G F + +GVVPDI++ AK +G G P+GA++TT Sbjct: 133 EIIAASNSFHGRTLFTVNVGGQPKYSDGFGPKFEGITHV----PYNDL-------------EALKAAISDKTCAVVLEPIQGEGGVLPAQQAYLEGARKLCDEHNALLVFDEVQSGMGRVGELF-AYMHYGVVPDILSSAKSLGGGFPIGAMLTT 269
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_SALTI (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Salmonella typhi GN=argD PE=3 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12 Identity = 47/152 (30.92%), Postives = 72/152 (47.37%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 II+ +NA+HG + T+ Q + P P + +++A V+ ++D H + E IQG GG+ P +L + K L + DEVQ G RTG F + +GV PDI+T AK +G G P+ A++TT Sbjct: 134 IIAFQNAFHGRSLFTVSVGGQPKYS---------DGFGPKPADIIHVPFNDLHA--VKAVMD----DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDKHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDILTSAKALGGGFPVSAMLTT 269 The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bpback to top |