CB250317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_SHIB3 (Succinylornithine transaminase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=astC PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.710e-11 Identity = 46/154 (29.87%), Postives = 71/154 (46.10%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E IQG GG++ + +L + + + L I DEVQ G RTG + + +GV PD++T AK +G P+GA++TT Sbjct: 131 IMAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRHAAYND-------------INSASALIDDATCAVIV----EPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTG-ELYAYMHYGVTPDLLTTAKALGGDFPVGALLTT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_SALTY (Acetylornithine/succinyldiaminopimelate aminotransferase OS=Salmonella typhimurium GN=argD PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 1.710e-11 Identity = 46/152 (30.26%), Postives = 71/152 (46.71%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 II+ NA+HG + T+ Q + P P + +++A V+ ++D H + E IQG GG+ P +L + + L + DEVQ G RTG F + +GV PDI+T AK +G G P+ A++TT Sbjct: 134 IIAFHNAFHGRSLFTVSVGGQPKYS---------DGFGPKPADIIHVPFNDLHA--VKAVMD----DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDILTSAKALGGGFPVSAMLTT 269
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_PASMU (Acetylornithine aminotransferase OS=Pasteurella multocida GN=argD PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.710e-11 Identity = 47/152 (30.92%), Postives = 74/152 (48.68%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 II+ + ++HG T+ Q+ + P P V ++ A VQ ++D T + E IQG GI+ + +L + + + L I DEVQ G RTG + + + + VVPDI+T AK +GNG P+GA++TT Sbjct: 130 IIAFKQSFHGRTLFTVSVGGQAKYS---------DGFGPKPADIVHVPFNDLAA--VQAVMDENTCAVIV----EPIQGESGILPASQDFLQGLRELCDQHNALLIFDEVQTGVGRTG-YLYAYMKYEVVPDILTSAKALGNGFPIGAMLTT 265
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_NEUCR (Acetylornithine aminotransferase, mitochondrial OS=Neurospora crassa GN=arg-8 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.710e-11 Identity = 48/156 (30.77%), Postives = 71/156 (45.51%), Query Frame = 2 Query: 26 DIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGF-----EAHGVVPDIVTMAKGIGNGIPLGAVV 478 +I+ +NA+HG G++ AT N K+ + Y + + K ++ E IQG GG++ +L A+ K ++ G L DE+Q G ARTG+ FW EAH PDI+T AK IGNG P+ A + Sbjct: 188 EIVCFQNAFHGRTMGSLSATP--NPKYQAPFAPMVPGFKVGTYNDIAAIPSLVTEKTCSVIV-------------EPIQGEGGVMPATEEFLVALGKRCREVGALLHYDEIQCGLARTGT-FWAHSSLPKEAH---PDILTTAKAIGNGFPIAATI 324
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_ARCFU (Acetylornithine aminotransferase OS=Archaeoglobus fulgidus GN=argD PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.710e-11 Identity = 46/158 (29.11%), Postives = 77/158 (48.73%), Query Frame = 2 Query: 2 ARLYTGCNDIISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLG 469 AR TG +S +HG G + T + ++ F + + V A +P + ++ ++D T A + E +QG G+ ++ A+ + +K G L I DEVQ GF RTG F + +G+ PD++TMAK +G+G+P+G Sbjct: 113 ARRATGRKKFVSFTGDFHGRTMGALSVTHKEKFRKPFEPLVSPVEFAEFNNP-------------ESLEKVVDEET----AAVIVELVQGEAGVYPADREFVKAIEELREKYGFLLIVDEVQTGFGRTGRWF-AKDHYGIEPDMITMAKAMGSGVPIG 252
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_ECOUT (Succinylornithine transaminase OS=Escherichia coli (strain UTI89 / UPEC) GN=astC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11 Identity = 46/154 (29.87%), Postives = 70/154 (45.45%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E IQG GG++ + +L + + + L I DEVQ G RTG + +GV PD++T AK +G G P+GA++ T Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRHAAYND-------------INSASALIDDATCAVIV----EPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTG-ELYACMHYGVTPDLLTTAKALGGGFPVGALLAT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_ECOL6 (Succinylornithine transaminase OS=Escherichia coli O6 GN=astC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11 Identity = 46/154 (29.87%), Postives = 70/154 (45.45%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E IQG GG++ + +L + + + L I DEVQ G RTG + +GV PD++T AK +G G P+GA++ T Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRHAAYND-------------INSASALIDDATCAVIV----EPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTG-ELYACMHYGVTPDLLTTAKALGGGFPVGALLAT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_ECOL5 (Succinylornithine transaminase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=astC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11 Identity = 46/154 (29.87%), Postives = 70/154 (45.45%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E IQG GG++ + +L + + + L I DEVQ G RTG + +GV PD++T AK +G G P+GA++ T Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRHAAYND-------------INSASALIDDATCAVIV----EPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTG-ELYACMHYGVTPDLLTTAKALGGGFPVGALLAT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_ECOK1 (Succinylornithine transaminase OS=Escherichia coli O1:K1 / APEC GN=astC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11 Identity = 46/154 (29.87%), Postives = 70/154 (45.45%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E IQG GG++ + +L + + + L I DEVQ G RTG + +GV PD++T AK +G G P+GA++ T Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRHAAYND-------------INSASALIDDATCAVIV----EPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTG-ELYACMHYGVTPDLLTTAKALGGGFPVGALLAT 266
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ASTC_ECO81 (Succinylornithine transaminase OS=Escherichia coli O81 (strain ED1a) GN=astC PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.233e-11 Identity = 46/154 (29.87%), Postives = 70/154 (45.45%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 I++ +NA+HG T+ A Q + F + + HA D LID T + E IQG GG++ + +L + + + L I DEVQ G RTG + +GV PD++T AK +G G P+GA++ T Sbjct: 131 IVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPPDIRHAAYND-------------INSASALIDDATCAVIV----EPIQGEGGVVPASNAFLQGLRELCDRHNALLIFDEVQTGVGRTG-ELYACMHYGVTPDLLTTAKALGGGFPVGALLAT 266 The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bpback to top |