CB250317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_ECO7I (Putrescine aminotransferase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=patA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15 Identity = 56/154 (36.36%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ + E + + G VA + E IQG GG+I PGYL AV K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV----PFGNI-----EAMRTALNECKKTGDD--VAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_ECO5E (Putrescine aminotransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=patA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15 Identity = 56/154 (36.36%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ + E + + G VA + E IQG GG+I PGYL AV K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV----PFGNI-----EAMRTALNECKKTGDD--VAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_ECO57 (Putrescine aminotransferase OS=Escherichia coli O157:H7 GN=patA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15 Identity = 56/154 (36.36%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ + E + + G VA + E IQG GG+I PGYL AV K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV----PFGNI-----EAMRTALNECKKTGDD--VAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_ECO55 (Putrescine aminotransferase OS=Escherichia coli (strain 55989 / EAEC) GN=patA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15 Identity = 56/154 (36.36%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ + E + + G VA + E IQG GG+I PGYL AV K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV----PFGNI-----EAMRTALNECKKTGDD--VAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_ECO45 (Putrescine aminotransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=patA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15 Identity = 56/154 (36.36%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ + E + + G VA + E IQG GG+I PGYL AV K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV----PFGNI-----EAMRTALNECKKTGDD--VAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_ECO27 (Putrescine aminotransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=patA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15 Identity = 56/154 (36.36%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ + E + + G VA + E IQG GG+I PGYL AV K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV----PFGNI-----EAMRTALNECKKTGDD--VAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: PAT_ECO24 (Putrescine aminotransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=patA PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15 Identity = 56/154 (36.36%), Postives = 77/154 (50.00%), Query Frame = 2 Query: 32 ISLRNAYHGNAAGTMGATAQSNWK--FNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGI-PLGAVVTT 484 I+ A+HG + G + ATA+S ++ F + G H P+ + E + + G VA + E IQG GG+I PGYL AV K + G L I DEVQ G RTG F E V PDI+ +AK +G G+ P+GA + T Sbjct: 174 IATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHV----PFGNI-----EAMRTALNECKKTGDD--VAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMF-ACEHENVQPDILCLAKALGGGVMPIGATIAT 315
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_XANAC (Acetylornithine aminotransferase OS=Xanthomonas axonopodis pv. citri GN=argD PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.685e-15 Identity = 49/150 (32.67%), Postives = 75/150 (50.00%), Query Frame = 2 Query: 29 IISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVV 478 I++ R ++HG ++ ATAQ ++ + Y + G + DV L G VA + E IQG GG++ APG+L V + L + DE+Q G RTG+ F ++ V PDIVT+AK +G G P+GA++ Sbjct: 134 IVTFRGSFHGRTLASVTATAQPKYQ--------------EGYEPLPGGFRYVDFNDVAALEAAMAGGDVAAVMVEPIQGEGGVMPAAPGFLSRVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQ-VTPDIVTLAKALGGGFPIGAML 268
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_ALNGL (Acetylornithine aminotransferase, mitochondrial OS=Alnus glutinosa GN=AG118 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.265e-14 Identity = 44/153 (28.76%), Postives = 74/153 (48.37%), Query Frame = 2 Query: 26 DIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGAVVTT 484 + +S N++HG G++ T++ N++ P+ V + +++ +A E IQG GG+ +L A+ K+ +G L + DEVQ G RTG + W E + V PDI+T+AK + G+P+GAV+ T Sbjct: 179 EFVSFSNSFHGRTMGSLALTSKENYR--------------SPFEPVMPGVTFLEYGNIEAATQLIQRRKIAAVFVEPIQGEGGVYSATKEFLYALRKACDDSGTLLVFDEVQCGLGRTG-YLWAHEIYDVFPDIMTLAKPLAGGLPIGAVLVT 316
BLAST of CB250317 vs. ExPASy Swiss-Prot
Match: ARGD_MYCTU (Acetylornithine aminotransferase OS=Mycobacterium tuberculosis GN=argD PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.652e-14 Identity = 47/153 (30.72%), Postives = 71/153 (46.41%), Query Frame = 2 Query: 14 TGCNDIISLRNAYHGNAAGTMGATAQSNWKFNVVQTGVHHALNPDPYRGVFGADGEMYAKDVQDLIDFGTSGHVAGFLSESIQGVGGIIELAPGYLPAVYKSIKKAGGLCIADEVQAGFARTGSHFWGFEAHGVVPDIVTMAKGIGNGIPLGA 472 TG +++ +A+HG G++ T Q P+ + G + DV D + H A E I G G++ GYL A + G L + DEVQ G RTG+ F+ + G+ PD+VT+AKG+G G+P+GA Sbjct: 127 TGRTKLVAAHDAFHGRTMGSLALTGQP--------------AKQTPFAPLPGDVTHVGYGDV-DALAAAVDDHTAAVFLEPIMGESGVVVPPAGYLAAARDITARRGALLVLDEVQTGMGRTGA-FFAHQHDGITPDVVTLAKGLGGGLPIGA 263 The following BLAST results are available for this feature:
BLAST of CB250317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250317 ID=CB250317; Name=CB250317; organism=Citrus sinensis; type=EST; length=485bpback to top |