CB250319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR1_PECCC (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum GN=peh PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.047e-16 Identity = 65/176 (36.93%), Postives = 95/176 (53.98%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSV----GPGAT-NLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNY-CPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDVKL 547 NTDGI +S +TI S I TGDD V++ G T N+ I + G GHG+SIGS + GV NVTV + TGT NG+RIKS + + G + + + +M NV PI+ID Y + +N P SD+ ++DI TS T+ V L+ + +++++VKL Sbjct: 226 NTDGIDPMSSKNITIAHSNISTGDDNVAIKAYKGRSETRNISILHNEFGTGHGMSIGS-----ETMGVYNVTVDDLIMTGTTNGLRIKS-DKSAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPDW------SDITFKDI--TSQTKGVVVLNGENAKKPIEVTMKNVKL 387
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR_PENJA (Polygalacturonase OS=Penicillium janthinellum PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.368e-16 Identity = 64/190 (33.68%), Postives = 101/190 (53.16%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNV-DNPIIIDQNYCPDNNNCPG-QASGVKISDVIYQDIHG---TSATEVGVKL--DCSSKNPCTGISLEDVKLIYK--NQPAEASC 580 NTDG + S+GVTI ++ + DDC+++ G N++ C GHG+SIGS+G V+NVT+T T T + NGVRIK+ + G ++ F ++ + D I+I+Q+Y +N + G SGV I+D+ + I G + A EV + D S +G+ + + K N P+ ASC Sbjct: 187 NTDGFDISESTGVTIRNAVVKNQDDCIAINSG-QNIYFTGGTCSGGHGLSIGSVGGRDDNT-VKNVTITDSTVTDSANGVRIKT-VYDATGSVSDVTFSDITVSGITDYGIVIEQDY--ENGSPTGTPTSGVPITDLTVKGITGSVESDAVEVYILCGDDACSDWTWSGVDITSGQTSSKCENVPSGASC 371
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR2_ASPTU (Polygalacturonase-2 OS=Aspergillus tubingensis GN=pgaII PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.198e-16 Identity = 61/190 (32.11%), Postives = 96/190 (50.53%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNV-DNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGT-SATEVGVKLDCSSKNPCTGISLEDVKL-------IYKNQPAEASC 580 NTD V S GV I+ + DDC+++ G N+W + C GHG+SIGS+G V+NVT+ T + ++N VRIK+ + G I + + +M+ + D ++I Q+Y D +GV I+DV + + GT + + L C S C+ + +DVK+ KN P+ ASC Sbjct: 178 NTDAFDVGNSVGVNIIKPWVHNQDDCLAINSGE-NIWFTSGTCIGGHGLSIGSVGGRSNNV-VKNVTIEHSTVSNSENAVRIKTVS-GATGSVSEITYSNIVMSGISDYGVVIQQDY-EDGKPTGKPTNGVTITDVKLESVTGTVDSKATDIYLLCGS-GSCSDWTWDDVKVTGGKKSTACKNYPSVASC 362
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR2_PECCC (Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum GN=pehA PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15 Identity = 63/176 (35.80%), Postives = 94/176 (53.41%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSV----GPGAT-NLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNY-CPDNNNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDVKL 547 NTDGI +S +TI S I TGDD V++ G T N+ I + G GHG+SIGS + GV NVTV + GT NG+RIKS + + G + + + +M NV PI+ID Y + +N P SD+ ++D+ TS T+ V L+ + +++++VKL Sbjct: 226 NTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKGRAETRNISILHNDFGTGHGMSIGS-----ETMGVYNVTVDDLKMNGTTNGLRIKS-DKSAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPDW------SDITFKDV--TSETKGVVVLNGENAKKPIEVTMKNVKL 387
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR2_ASPNG (Endopolygalacturonase-2 OS=Aspergillus niger GN=pgaB PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15 Identity = 67/202 (33.17%), Postives = 101/202 (50.00%), Query Frame = 2 Query: 17 SAAGDSP---NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNV-DNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHG---TSATEVGVKLDCSSKNPCTGISLEDVKL-------IYKNQPAEASC 580 +A GD+ NTD V S GV I+ + DDC++V G N+W C GHG+SIGS+G V+NVT+ T + ++N VRIK+ + G I + + +M+ + D ++I Q+Y D +GV I DV + + G + ATE + L C S C+ + +DVK+ KN P+ ASC Sbjct: 168 NADGDTQGGHNTDAFDVGNSVGVNIIKPWVHNQDDCLAVNSGE-NIWFTGGTCIGGHGLSIGSVGDRSNNV-VKNVTIEHSTVSNSENAVRIKTIS-GATGSVSEITYSNIVMSGISDYGVVIQQDY-EDGKPTGKPTNGVTIQDVKLESVTGSVDSGATE--IYLLCGS-GSCSDWTWDDVKVTGGKKSTACKNFPSVASC 362
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR_PENGR (Polygalacturonase OS=Penicillium griseoroseum GN=PGG1 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 71/207 (34.30%), Postives = 105/207 (50.72%), Query Frame = 2 Query: 5 GVKVSAA-GDSP---NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKS-WGRPSNGFARNILFQHALMNNVDN-PIIIDQNYCPDNNNCPG-QASGVKISDVIYQDIHGTSATE-VGVKLDCSSKNPCTGISLEDVKLI-------YKNQPAEASC 580 G+ V A GDS NTD V +S+GV I + DDC++V G TN+ C GHGISIGS+G V VTV S T + NGVRIK+ +G + G + + ++ ++ + I+I+Q+Y +N + G SGV I+D+ ++HGT A+ V + C+S C+ S V + K P+ ASC Sbjct: 177 GITVDTADGDSNGGHNTDAFDVGSSNGVYITSPIVHNQDDCLAVNSG-TNVHFTGAQCTGGHGISIGSVGGRSDNT-VDGVTVESCTIKDSDNGVRIKTVYG--ATGTVQGVTYKDITLSGIAKYGIVIEQDY--ENGSPTGTPTSGVPITDLTLDNVHGTVASSGVDTYILCAS-GACSDWSWSGVSITGGQTSKKCKGIPSGASC 376
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR4_ASPNG (Polygalacturonase-4 OS=Aspergillus niger GN=pgaE PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15 Identity = 58/195 (29.74%), Postives = 99/195 (50.77%), Query Frame = 2 Query: 26 GDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKS-WGRPSNGFARNILFQHALMNNV-DNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGT-SATEVGVKLDCSSKNPCTGISLEDVKLI-------YKNQPAEASC 580 G++ NTDG + S+ +TI + + DDCV+V G N++ C GHG+SIGS+G V+NVT +QNGVRIK+ +G G + ++ ++++ D I+++QNY D + P G+ I D + ++ G+ ++ + + C S + CT + DV + +N P + SC Sbjct: 192 GEAANTDGFDIGDSTYITITGANVYNQDDCVAVNSG-ENIYFSGGVCSGGHGLSIGSVGGRSDNT-VKNVTFYDSDIKSSQNGVRIKTIYG--DTGSVSEVTYKEITLSDITDYGIVVEQNY-DDTSESP--TDGITIEDFVLDNVQGSVESSGTNIYIVCGS-DSCTDWTWTDVDVTGGKTSSDCENVPDDISC 378
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR_PENDI (Polygalacturonase OS=Penicillium digitatum GN=PG1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15 Identity = 66/190 (34.74%), Postives = 105/190 (55.26%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDN-PIIIDQNYCPDNNNCPGQ-ASGVKISDVIYQDIHGT---SATEVGVKL-DCSSKN-PCTGISLEDVKLIYK--NQPAEASC 580 NTD V +S+ +TI ++ I DDC+++ G +N+ C GHGISIGS+G V++VT++ T + NGVR+K+ + + G + F + ++N+ I+I+Q+Y +N + G+ +GV IS++ +++ GT SATEV + + S KN G SL K K N PA ASC Sbjct: 183 NTDAFDVGSSTFITISNANIKNQDDCLAINSG-SNIKFVGGTCSGGHGISIGSVGLRDNNI-VKDVTISDSTVINSDNGVRVKTIYQ-ATGAVSGVTFSNIKLSNIAKYGIVIEQDY--ENGSPTGKPTNGVPISELTIENVTGTLKSSATEVYILCGNGSCKNWKWAGNSLSGGKKSGKCGNVPAGASC 367
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR1_ASPAC (Polygalacturonase 1 OS=Aspergillus aculeatus GN=pga1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15 Identity = 56/191 (29.32%), Postives = 93/191 (48.69%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDN-PIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGTSATE-VGVKLDCSSKNPCTGISLEDVKLIYKNQPAEASCANADGSAS 604 NTD + S+ VTI + + DDCV+V G N++ C GHG+SIGS+G V+NVT T + NGVRIK+ + G ++ ++ + ++ I++ QNY D ++ P +GV I+D + ++HG+ + + + C S C+ + DV + + C N AS Sbjct: 196 NTDAFDIGTSTYVTISGATVYNQDDCVAVNSG-ENIYFSGGYCSGGHGLSIGSVGGRSDNT-VKNVTFVDSTIINSDNGVRIKT-NIDTTGSVSDVTYKDITLTSIAKYGIVVQQNY-GDTSSTP--TTGVPITDFVLDNVHGSVVSSGTNILISCGS-GSCSDWTWTDVSV--SGGKTSSKCTNVPSGAS 377
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR_GIBFU (Polygalacturonase OS=Gibberella fujikuroi GN=PGA PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.280e-14 Identity = 57/182 (31.32%), Postives = 89/182 (48.90%), Query Frame = 2 Query: 23 AGDSPN-----------TDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDN-PIIIDQNYCPDNNNCPGQ-ASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGIS 529 AGD PN TDG + +S VT+ ++ + DDCV+V G TN+ + N+ C GHG+SIGS+G + V V S +QNG RIKS + G N+ +Q+ + N+ + + Q+Y N G+ +GVKIS++ + + GT A+ C+G + Sbjct: 173 AGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYNQDDCVAVTSG-TNIVVSNMYCSGGHGLSIGSVGGKSDNV-VDGVQFLSSQVVNSQNGCRIKS-NSGATGTINNVTYQNIALTNISTYGVDVQQDYL--NGGPTGKPTNGVKISNIKFIKVTGTVASSAQDWFILCGDGSCSGFT 349 The following BLAST results are available for this feature:
BLAST of CB250319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB250319 ID=CB250319; Name=CB250319; organism=Citrus sinensis; type=EST; length=708bpback to top |