CB250319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR_PENEN (Polygalacturonase OS=Penicillium expansum GN=PEPG1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 50/165 (30.30%), Postives = 85/165 (51.52%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNP-IIIDQNYCPDNNNCPGQ-ASGVKISDVIYQDIHGTSATE-VGVKLDCSSKNPCTG 523 NTDG + S +TI + + DDC+++ G TN+ C GHG+SIGS+G V+ V ++S +QNGVR+K+ + G + + FQ ++ + + I I Q Y N+ G +GV I+ + ++HGT ++ + ++C S C+G Sbjct: 195 NTDGFDIGDSDSITITGATVYNQDDCLAINSG-TNIVFSGGYCSGGHGLSIGSVGGRSNNV-VETVHISSTQVVNSQNGVRVKAVS-GATGTIKGVTFQDITLSGITSQGITIRQEY--TNSGYTGSPTTGVPITGLTLNNVHGTVTSKGTDITIECGSSASCSG 354
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR1_ASPNG (Polygalacturonase-1 OS=Aspergillus niger GN=pgaA PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14 Identity = 61/189 (32.28%), Postives = 94/189 (49.74%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNYCPDNNNCPGQAS-GVKISDVIYQDIHGT---SATEVGVKLDCSSKNPCT--GISLEDVKLIYK--NQPAEASC 580 NTDG + S+GV I + + DDC+++ G ++ C GHG+SIGS+G V+NVT++ T + + NGVRIK+ + + + L D I+I+Q+Y +N + G S G+ I+DV + GT AT+V + S + T G+ L K K N P+ ASC Sbjct: 184 NTDGFDISESTGVYISGATVKNQDDCIAINSG-ESISFTGGTCSGGHGLSIGSVGGRDDNT-VKNVTISDSTVSNSANGVRIKTIYKETGDVSEITYSNIQLSGITDYGIVIEQDY--ENGSPTGTPSTGIPITDVTVDGVTGTLEDDATQVYILCGDGSCSDWTWSGVDLSGGKTSDKCENVPSGASC 368
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLRB_ASPFL (Polygalacturonase B OS=Aspergillus flavus GN=pecB PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 58/190 (30.53%), Postives = 92/190 (48.42%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNV-DNPIIIDQNYCPDNNNCPGQ-ASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCT-----GISLEDVKLIYK--NQPAEASC 580 NTD V S+GV I + + DDC+++ G N+ C GHGISIGS+G V+NV V T + NG+RIK+ + G + +++ + N+ N I+I+ +Y N G+ +GV I+D+ + G+ A++ K C+ G+S+ K K N P+ ASC Sbjct: 182 NTDAFDVSESNGVYITGANVKNQDDCLAINSG-ENIEFTGATCSGGHGISIGSIGNRDTNT-VKNVKVADSTVVDSDNGIRIKTIS-GATGSVSGVTYENITLKNIKKNGIVIELDY--KNGGPTGKPTTGVPITDLTVNGVTGSVASKATPVYILCGKGSCSDWTWKGVSISGGKKSDKCQNIPSGASC 366
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLRA_ASPFL (Polygalacturonase A OS=Aspergillus flavus GN=pecA PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.865e-14 Identity = 57/197 (28.93%), Postives = 102/197 (51.78%), Query Frame = 2 Query: 17 SAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDN-PIIIDQNYCPDNNNCPG-QASGVKISDVIYQDIHGT---SATEVGVKLDCSSKNPCT--GISLEDVKLIYK--NQPAEASC 580 + + NTD V +S+ + I + + DDC+++ G+ ++ N C GHG+SIGS+G V++VT+++ +QNGVRIK+ + G N+ F+ ++ + +I++Q+Y +N + G +G+K+SD+ + + GT AT++ + S T G+S+ K K N P ASC Sbjct: 172 AGTAEGHNTDAFDVGSSTYINIDGATVYNQDDCLAINSGS-HITFTNGYCDGGHGLSIGSVGGRSDNT-VEDVTISNSKVVNSQNGVRIKT-VYDATGTVSNVKFEDITLSGITKYGLIVEQDY--ENGSPTGTPTNGIKVSDITFDKVTGTVESDATDIYILCGSGSCTDWTWSGVSITGGKTSSKCENVPTGASC 363
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR3_ASPNG (Polygalacturonase-3 OS=Aspergillus niger GN=pgaC PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.415e-13 Identity = 48/143 (33.57%), Postives = 75/143 (52.45%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDNPIIIDQNYCPDNNNCPGQASGVKISDVIYQDIHGT 466 NTDG + S+ +TI ++I DDCV++ G N++ C GHG+SIGS+G V+NVT V +Q +RIK+ + + + A + D I+I+QNY D + P +GV I+D + ++I GT Sbjct: 198 NTDGFDIGESTYITITGAEIYNQDDCVAINSG-ENIYFSASVCSGGHGLSIGSVGGRDDNT-VKNVTFYDVNVLKSQQAIRIKTIYGDTGSVSEVTYHEIAFSDATDYGIVIEQNY-DDTSKTP--TTGVPITDFVLENIVGT 335
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR1_COLLN (Endopolygalacturonase 1 OS=Colletotrichum lindemuthianum GN=PG1 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 57/169 (33.73%), Postives = 94/169 (55.62%), Query Frame = 2 Query: 17 SAAGDSP---NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDN-PIIIDQNYCPDNNNCPGQ-ASGVKISDVIYQDIHGT-SATEVGVKLDCSS 505 ++AGDS NTD V +S+GV I + + DDC++V G TN+ C GHG+SIGS+G + V++V++T+ + NGVRIK+ + G +I + ++N+ I+I+Q+Y +N + G+ SGV IS + I G+ S++ V + C+S Sbjct: 169 NSAGDSAGGHNTDAFDVGSSTGVYISGADVKNQDDCLAVNSG-TNITFTGGTCSGGHGLSIGSVGGRKDNV-VKSVSITNSKIINSDNGVRIKTVA-GATGPVSDITYSGITLSNIAKYGIVIEQDY--ENGSPTGKPTSGVPISGLTLSKISGSVSSSATPVYILCAS 332
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR_ASPOR (Polygalacturonase OS=Aspergillus oryzae GN=AO090023000161 PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.118e-13 Identity = 56/197 (28.43%), Postives = 101/197 (51.27%), Query Frame = 2 Query: 17 SAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDN-PIIIDQNYCPDNNNCPG-QASGVKISDVIYQDIHGT---SATEVGVKLDCSSKNPCT--GISLEDVKLIYK--NQPAEASC 580 + + NTD V +S+ + I + + DDC+++ G+ ++ N C GHG+SIGS+G V++VT+++ +QNGVRIK+ + G N+ F+ ++ + +I++Q+Y +N + G +G+K+SD+ + + GT AT++ + S T G+S+ K K N ASC Sbjct: 172 AGTAEGHNTDAFDVGSSTYINIDGATVYNQDDCLAINSGS-HITFTNGYCDGGHGLSIGSVGGRSDNT-VEDVTISNSKVVNSQNGVRIKT-VYDATGTVSNVKFEDITLSGITKYGLIVEQDY--ENGSPTGTPTNGIKVSDITFDKVTGTVESDATDIYILCGSGSCTDWTWSGVSITGGKTSSKCENVSTGASC 363
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR2_PENOL (Polygalacturonase 2 OS=Penicillium olsonii GN=PG2 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.025e-13 Identity = 58/191 (30.37%), Postives = 98/191 (51.31%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDN-PIIIDQNYCPDNNNCPG-QASGVKISDVIYQDIHGTSATE-VGVKLDCSSKNPCT-----GISLEDVKL--IYKNQPAEASC 580 NTD V +S+G+TI + + DDC++V G T++ C GHG+SIGS+G V NV + + + NGVRIK+ + G +N+ ++ ++ + I+I+Q+Y +N + G GV I+D+ + GT A+ V + C ++ C+ G+S+ K +N P+ ASC Sbjct: 196 NTDAFDVGSSTGITITGATVYNQDDCLAVNSG-TDITFTGGLCSGGHGLSIGSVGGRSNN-DVANVIIENSQIQDSTNGVRIKT-VYEATGSVKNVTYKDITLSGITKYGIVIEQDY--ENGSPTGTPTDGVPITDLTLDGVKGTVASSGTNVYILC-AEGACSDWTWDGVSVSGGKTSSACENVPSSASC 380
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR1_PENOL (Polygalacturonase 1 OS=Penicillium olsonii GN=PG1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13 Identity = 57/190 (30.00%), Postives = 99/190 (52.11%), Query Frame = 2 Query: 38 NTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKSWGRPSNGFARNILFQHALMNNVDN-PIIIDQNYCPDNNNCPGQ-ASGVKISDVIYQDIHG---TSATEVGVKLDCSSKNPCT----GISLEDVKLIYKNQPAEASC 580 NTD V S+ +TI ++ I DDC+++ G N+ C GHG+SIGS+G V+NVT++ T + + NG+RIK+ + + G ++ F + ++N+ I+I+Q+Y +N + G+ +GV I+ + + + G +S T+V + S + T +S KN P+ ASC Sbjct: 186 NTDAFDVGESTYITISNANIKNQDDCLAINSG-ENIIFTGGTCSGGHGLSIGSVGGRDDNT-VKNVTISDSTVSNSDNGIRIKTIYK-AKGEVADVTFSNIELSNIAKYGIVIEQDY--ENGSPTGKPTTGVPITGLTVEKVTGSVKSSGTDVYILCGSGSCSDWTWSGNKVSGGKTSSKCKNVPSGASC 370
BLAST of CB250319 vs. ExPASy Swiss-Prot
Match: PGLR_ASPPA (Polygalacturonase OS=Aspergillus parasiticus GN=pecA PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12 Identity = 54/198 (27.27%), Postives = 103/198 (52.02%), Query Frame = 2 Query: 17 SAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKEQQEAGVQNVTVTSVTFTGTQNGVRIKS-WGRPSNGFARNILFQHALMNNVDN-PIIIDQNYCPDNNNCPG-QASGVKISDVIYQDIHGT---SATEVGVKLDCSSKNPCT--GISLEDVKLIYK--NQPAEASC 580 + + NTD + +S+ + I + + DDC+++ G+ ++ N C GHG+SIGS+G V++VT+++ +QNGVRIK+ +G + G N+ F+ ++ + ++++Q+Y +N + G +G+ +S + ++ + GT AT++ + S T G+S+ K K N P ASC Sbjct: 172 AGTAEGHNTDAFDIGSSTYINIDGATVYNQDDCLAINSGS-HITFTNGYCDGGHGLSIGSVGGRSDNT-VEDVTISNSKVVNSQNGVRIKTVYG--ATGTVSNVKFEDITLSGITKYGLVVEQDY--ENGSPTGTPTNGITVSGITFEKVTGTVESDATDIYILCGSGSCTDWTWSGVSITGGKTSSKCENVPTGASC 363 The following BLAST results are available for this feature:
BLAST of CB250319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 52
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250319 ID=CB250319; Name=CB250319; organism=Citrus sinensis; type=EST; length=708bpback to top |