CB250327

Overview
NameCB250327
Unique NameCB250327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 8.602e-39
Identity = 95/211 (45.02%), Postives = 130/211 (61.61%), Query Frame = 1
Query:    1 TSRLLVYDFMPNGSLDSHLFTEKDSDF-LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRN---SQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG 621
            T RLLVY +M NGS+ S L    +S   LDW  R +IALG+ARGLAYLH+ C   IIH D+K  NILLD EF   V DFGLAKL+  + + V T +RGT G++APE +S    + K DV+ YG+ML E ++G+R    ++ + D  V     W  K +++   L +L+D  L+GN  +EE+ +L  VA  C Q     RP M +VV++LEG
Sbjct:  357 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL-DW-VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 565          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.124e-38
Identity = 93/211 (44.08%), Postives = 127/211 (60.19%), Query Frame = 1
Query:    1 TSRLLVYDFMPNGSLDSHLFTEKDSD-FLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRN---SQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG 621
            T RLLVY +M NGS+ S L    + +  LDW  R  IALG+ARGLAYLH+ C   IIH D+K  NILLD EF   V DFGLAKL+    S V T +RGT G++APE +S    + K DV+ YG+ML E ++G++    ++ + D  +     W  K++++   L SL+D  LEG   E E+ +L  +A  C Q     RP M +VV++LEG
Sbjct:  343 TERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLL-DW-VKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEG 551          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 159.844 bits (403), Expect = 1.467e-38
Identity = 95/211 (45.02%), Postives = 129/211 (61.14%), Query Frame = 1
Query:    1 TSRLLVYDFMPNGSLDSHLFTEKDSDF-LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRN---SQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG 621
            T RLLVY +M NGS+ S L     S   LDW TR +IALG+ARGL+YLH+ C   IIH D+K  NILLD EF   V DFGLAKL+  + + V T +RGT G++APE +S    + K DV+ YG+ML E ++G+R    ++ + D  V     W  K +++   L  L+DP L+ N +E EL ++  VA  C Q     RP M +VV++LEG
Sbjct:  370 TERLLVYPYMANGSVASCLRERPPSQPPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL-DW-VKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLEG 578          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.916e-38
Identity = 93/211 (44.08%), Postives = 127/211 (60.19%), Query Frame = 1
Query:    1 TSRLLVYDFMPNGSLDSHLFTEKDSD-FLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRN---SQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG 621
            T RLLVY +M NGS+ S L    + +  LDW  R  IALG+ARGLAYLH+ C   IIH D+K  NILLD EF   V DFGLAKL+    S V T +RGT G++APE +S    + K DV+ YG+ML E ++G++    ++ + D  +     W  K++++   L SL+D  LEG   E E+ +L  +A  C Q     RP M +VV++LEG
Sbjct:  362 TERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLL-DW-VKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEG 570          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y5393_ARATH (Probable receptor-like protein kinase At5g39030 OS=Arabidopsis thaliana GN=At5g39030 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.503e-38
Identity = 99/225 (44.00%), Postives = 134/225 (59.56%), Query Frame = 1
Query:    1 TSRLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLV-GREFSRVLTTMRGTRGYLAPERISGV--AITAKADVYSYGMMLYEFVSGR-RNSQESEDGKV--RFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELA-RLCNVACWCIQDDETHRPSMGQVVQILEGVLD-VTLPPIP 651
            + R +VY+F+ NGSLD  +   K S   D  T Y IALG ARGL YLH  C+  I+H DIKP+NILLD   CPKVSDFGLAKL   RE    L   RGT GY+APE  S +   ++ K+DVYS+GM++ + +  R +   E+ D      +FP W  K + +G       D   E   +E+E+A ++  V  WCIQ   + RPSM +VV+++EG LD + +PP P
Sbjct:  564 SKRAIVYEFLENGSLDQFMSRNK-SLTQDVTTLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDGNLCPKVSDFGLAKLCEKRESVLSLMDTRGTIGYIAPEVFSRMYGRVSHKSDVYSFGMLVIDMIGARSKEIVETVDSAASSTYFPDWIYKDLEDGEQTWIFGD---EITKEEKEIAKKMIVVGLWCIQPCPSDRPSMNRVVEMMEGSLDALEIPPKP 784          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK25_ARATH (Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana GN=CRK25 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.576e-38
Identity = 87/217 (40.09%), Postives = 134/217 (61.75%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPR 654
            ++LVY+F+PN SLD  LF  +    LDW+ RY+I  G ARG+ YLH   R  IIH D+K  NILLDA+  PK+SDFG+A++ G + ++  T  + GT GY++PE       + K+DVYS+G+++ E ++G++NS   E+  +    ++  K  VE S L  L+D  + GN    E+ R  ++A  C+Q+D + RPSM  ++ ++     VTL PIP+
Sbjct:  416 KILVYEFVPNKSLDYFLFDNEKRRVLDWQRRYKIIEGIARGILYLHRDSRLTIIHRDLKASNILLDADMHPKISDFGMARIFGVDQTQANTKRIVGTYGYMSPEYAIHGKYSVKSDVYSFGVLVLELITGKKNSSFYEEDGLGDLVTYVWKLWVENSPL-ELVDEAMRGNFQTNEVIRCIHIALLCVQEDSSERPSMDDIL-VMMNSFTVTL-PIPK 629          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.242e-37
Identity = 93/211 (44.08%), Postives = 126/211 (59.72%), Query Frame = 1
Query:    1 TSRLLVYDFMPNGSLDSHLFTEKDSDF-LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRN---SQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG 621
            T RLLVY +M NGS+ S L     S   L W  R QIALG+ARGL+YLH+ C   IIH D+K  NILLD EF   V DFGLA+L+  + + V T +RGT G++APE +S    + K DV+ YG+ML E ++G+R    ++ + D  V     W  K +++   L  L+DP L+ N  E E+ +L  VA  C Q     RP M +VV++LEG
Sbjct:  373 TERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLL-DW-VKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 581          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y5392_ARATH (Probable receptor-like protein kinase At5g39020 OS=Arabidopsis thaliana GN=At5g39020 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.119e-37
Identity = 96/223 (43.05%), Postives = 134/223 (60.09%), Query Frame = 1
Query:    1 TSRLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLV-GREFSRVLTTMRGTRGYLAPERISGV--AITAKADVYSYGMMLYEFVSGRRNSQESE--DGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLD-VTLPPIP 651
            + R ++ +F+ +GSLD  +   K S   +  T Y IALG ARGL YLH  C+  I+H DIKP+NILLD  FCPKV+DFGLAKL   RE    L   RGT GY+APE +S +   I+ K+DVYSYGM++ + + G RN  E+   +G   +FP W  K +  G     + D   E   D + + ++  V+ WCI+   + RP M +VV+++EG LD + LPP P
Sbjct:  562 SKRAIISEFLEHGSLDQFISRNK-SLTPNVTTLYGIALGIARGLEYLHYGCKTRIVHFDIKPQNILLDDNFCPKVADFGLAKLCEKRESILSLIDTRGTIGYIAPEVVSRMYGGISHKSDVYSYGMLVLDMI-GARNKVETTTCNGSTAYFPDWIYKDLENGDQTWIIGDEINE--EDNKIVKKMILVSLWCIRPCPSDRPPMNKVVEMIEGSLDALELPPKP 780          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.614e-37
Identity = 89/212 (41.98%), Postives = 127/212 (59.91%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTT-MRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLP 642
            +LVY+ +PN SLD  +F E     L W  RY+I  G ARGL YLHE  +  IIH D+K  NILLDAE  PKV+DFG+A+L   + +R  T+ + GT GY+APE +     +AK+DVYS+G+ML E +SG +N     +G     P++A K+ +EG  L S++DP L  N    E+ +L  +   C+Q++   RP+M  V+  L      T+P
Sbjct:  410 ILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGEKNKNFETEG----LPAFAWKRWIEG-ELESIIDPYLNEN-PRNEIIKLIQIGLLCVQENAAKRPTMNSVITWLARDGTFTIP 615          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.165e-37
Identity = 89/222 (40.09%), Postives = 133/222 (59.91%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTT-MRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNS--QESEDGKVRFFPSWAAKQIVEGSNLISLLDPRL--EGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLP-PIPRA 657
            +LVY+F+PN SLD  +F E+    L W  RY I  G ARGL YLHE  +  IIH D+K  NILLDAE  PKV+DFG+A+L   + +R  T+ + GT GY+APE  +    + K+DVYS+G+ML E +SG+ N   ++ E+ +    P++  K+ +EG     ++DP      N    E+ +L ++   C+Q+D + RPS+  ++  LE    +T+P P P A
Sbjct:  415 ILVYEFVPNSSLDHFIFDEEKRRVLTWDVRYTIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGKSNKKLEKEEEEEEEELPAFVWKRWIEG-RFAEIIDPLAAPSNNISINEVMKLIHIGLLCVQEDISKRPSINSILFWLERHATITMPVPTPVA 635          
The following BLAST results are available for this feature:
BLAST of CB250327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
BAK1_ARATH8.602e-3945.02BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK5_ARATH1.124e-3844.08Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
SERK1_ARATH1.467e-3845.02Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
SERK4_ARATH1.916e-3844.08Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
Y5393_ARATH2.503e-3844.00Probable receptor-like protein kinase At5g39030 OS... [more]
CRK25_ARATH5.576e-3840.09Cysteine-rich receptor-like protein kinase 25 OS=A... [more]
SERK2_ARATH1.242e-3744.08Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y5392_ARATH2.119e-3743.05Probable receptor-like protein kinase At5g39020 OS... [more]
CRK36_ARATH3.614e-3741.98Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK37_ARATH6.165e-3740.09Cysteine-rich receptor-like protein kinase 37 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionEST0115 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ167 similar to putative receptor-like kinase (acc# NP_179503), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250327 ID=CB250327; Name=CB250327; organism=Citrus sinensis; type=EST; length=772bp
ACTAGTAGGTTGTTGGTCTACGATTTCATGCCAAACGGTTCTTTAGACTC
TCATCTCTTCACTGAAAAAGATTCAGACTTTCTTGATTGGAAGACAAGAT
ACCAAATTGCACTGGGGACAGCCAGAGGTTTGGCTTATCTTCATGAGAAG
TGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAGAACATTCTGTT
AGACGCTGAATTTTGTCCCAAAGTGTCGGATTTTGGGCTGGCAAAGCTTG
TTGGGAGGGAGTTCAGCCGTGTCCTAACAACCATGAGAGGAACAAGAGGT
TACCTTGCACCTGAACGGATTTCAGGAGTGGCCATAACAGCCAAAGCGGA
TGTCTACAGCTATGGAATGATGCTGTATGAATTTGTATCAGGAAGGAGGA
ACTCCCAGGAATCTGAAGATGGTAAAGTGAGGTTCTTCCCATCTTGGGCT
GCTAAACAAATAGTTGAAGGCAGCAATCTCATTAGCCTATTAGACCCAAG
ACTGGAGGGCAACGCTGACGAAGAAGAGCTTGCAAGACTTTGCAATGTGG
CTTGTTGGTGCATCCAAGATGATGAGACTCACAGGCCATCAATGGGTCAA
GTAGTTCAAATTCTTGAGGGAGTTTTGGACGTGACACTGCCTCCAATTCC
CAGAGCTCTCCAAGTAATGGTCGATGACCATGAGCACGTAGTCTTCTTCA
CTGAATCATCCACATCTCAGAGTTCCCTGTCAAAGAGCAACAATTCAACT
GCTTCATCTCAAGCAAAGAGTA
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