CB250327

Overview
NameCB250327
Unique NameCB250327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK20_ARATH (Putative cysteine-rich receptor-like protein kinase 20 OS=Arabidopsis thaliana GN=CRK20 PE=2 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 5.219e-36
Identity = 84/205 (40.98%), Postives = 122/205 (59.51%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQ-ESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            ++LVY+F+PN SLD  LF       LDW  RY+I  G ARG+ YLH+  R  IIH D+K  NILLDA+  PKV+DFG+A++ G + +   T  + GT GY+APE       + K+DVYS+G+++ E VSG +NS  +  DG +    ++  +    GS    L+DP    N    E+ R  ++A  C+Q+D   RP+M  +VQ+L
Sbjct:  413 KILVYEFVPNKSLDYFLFDPTMQGQLDWSRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGKFSMKSDVYSFGVLVLEIVSGMKNSSLDQMDGSISNLVTYTWRLWSNGSP-SELVDPSFGDNYQTSEITRCIHIALLCVQEDANDRPTMSAIVQML 616          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: BRL3_ARATH (Receptor-like protein kinase BRI1-like 3 OS=Arabidopsis thaliana GN=BRL3 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.219e-36
Identity = 87/213 (40.85%), Postives = 125/213 (58.69%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDS--HLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRV-LTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRL-EGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDV 633
            RLLVY++M  GSL++  H  T+K   FLDW  R +IA+G ARGLA+LH  C   IIH D+K  N+LLD +F  +VSDFG+A+LV    + + ++T+ GT GY+ PE       TAK DVYSYG++L E +SG++     E G+      W AKQ+        +LDP L    + + EL     +A  C+ D    RP+M QV+ + + ++ V
Sbjct:  927 RLLVYEYMKYGSLETVLHEKTKKGGIFLDWSARKKIAIGAARGLAFLHHSCIPHIIHRDMKSSNVLLDQDFVARVSDFGMARLVSALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSYGVILLELLSGKKPIDPEEFGEDNNLVGW-AKQLYREKRGAEILDPELVTDKSGDVELLHYLKIASQCLDDRPFKRPTMIQVMTMFKELVQV 1138          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.902e-36
Identity = 88/214 (41.12%), Postives = 121/214 (56.54%), Query Frame = 1
Query:    1 TSRLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLP 642
            TS+LL+YD++P GSLD  L   K  + LDW +R  I +G A+GLAYLH  C   IIH DIK  NILLD     +VSDFGLAKL+  E S + T + GT GYLAPE +     T K DVYS+G+++ E +SG+  +  S   K      W    ++  +    ++D   EG  + E L  L ++A  C+      RP+M +VVQ+LE  +    P
Sbjct:  371 TSKLLLYDYLPGGSLDEAL--HKRGEQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLPTDASFIEKGFNIVGW-LNFLISENRAKEIVDLSCEG-VERESLDALLSIATKCVSSSPDERPTMHRVVQLLESEVMTPCP 580          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.902e-36
Identity = 85/217 (39.17%), Postives = 129/217 (59.45%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG---VLDVTLPP 645
            +++VY+++PN SLD  LF       LDWK RY+I  GTARG+ YLH+  +  IIH D+K  NILLDA   PKV+DFG A++ G + S  +T    GT GY+APE +     + K+DVYSYG+++ E + G+RN+  S    V+ F ++  +    G+ L +L+D  +  N   EE+ R  ++A  C+Q++ T RP    ++ +L     +L V  PP
Sbjct:  427 KIIVYEYLPNRSLDYILFDPTKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNT--SFSSPVQNFVTYVWRLWKSGTPL-NLVDATIAENYKSEEVIRCIHIALLCVQEEPTDRPDFSIIMSMLTSNSLILPVPKPP 640          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.518e-35
Identity = 87/213 (40.85%), Postives = 125/213 (58.69%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHL---FTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVR--FFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLD 630
            R+LVY +MPNGS+   L   + EK S  LDW  R  IALG ARGL YLHE+C   IIH D+K  NILLD  F   V DFGLAKL+ +  S V T +RGT G++APE +S    + K DV+ +G+++ E ++G +   +  +G+VR     SW  + +        ++D  L+G  D+  L  +  +A  C Q     RP M QV+++LEG+++
Sbjct:  369 RMLVYPYMPNGSVADRLRDNYGEKPS--LDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQG-NGQVRKGMILSW-VRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLEGLVE 577          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.518e-35
Identity = 87/207 (42.03%), Postives = 119/207 (57.49%), Query Frame = 1
Query:    1 TSRLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG 621
            + RLLVY +M NGS+ S L   K    LDW TR +IA+G ARGL YLHE+C   IIH D+K  NILLD  F   V DFGLAKL+  E S V T +RGT G++APE +S    + K DV+ +G++L E ++G R  +  +    +       +++ +   +  L+D  L    D  E+  +  VA  C Q    HRP M +VVQ+LEG
Sbjct:  367 SERLLVYPYMSNGSVASRL---KAKPALDWNTRKKIAIGAARGLFYLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQMLEG 570          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.518e-35
Identity = 83/206 (40.29%), Postives = 125/206 (60.68%), Query Frame = 1
Query:    4 SRLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGR-EFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILE 618
            +RLLVY+FMP GSL++HLF  + +  L W  R ++A+G A+GL +LH+  +  +I+ D K  NILLDAEF  K+SDFGLAK     + + V T + GT GY APE ++   +TAK+DVYS+G++L E +SGRR   +S+ G  +    WA   + +   L  ++D RL G   ++      ++A  C+  D   RP M +V+  L+
Sbjct:  161 NRLLVYEFMPKGSLENHLF-RRGAQPLTWAIRMKVAIGAAKGLTFLHD-AKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATPYLGDKRKLFRIMDTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVLAKLD 364          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK1_ARATH (Cysteine-rich receptor-like protein kinase 1 OS=Arabidopsis thaliana GN=CRK1 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.383e-35
Identity = 77/203 (37.93%), Postives = 120/203 (59.11%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILE 618
            LLVY+++ N SLD  LF +     L WK R+ I +G + GL YLH      IIH DIK  NILLD    PK++DFGL + +G + ++  T + GT GYLAPE +    +T KADVY++G+++ E V+G++N+  ++      +  W   +  + + L   +DPRL+G+  EEE  ++  +   C+Q     RPSM ++V +L+
Sbjct:  388 LLVYEYVHNRSLDQILFMKNTVHILSWKQRFNIIIGISEGLEYLHRGSEVKIIHRDIKTSNILLDRNLSPKIADFGLIRSMGTDKTQTNTGIAGTLGYLAPEYLIKGQLTEKADVYAFGVLIIEIVTGKKNNAFTQGTSSVLYSVW---EHFKANTLDRSIDPRLKGSFVEEEALKVLQIGLLCVQSSVELRPSMSEIVFMLQ 587          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.770e-35
Identity = 87/215 (40.47%), Postives = 116/215 (53.95%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFT-EKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKL-VGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPP 645
            RLLVY+FMP GSL+ HL     D + LDW  R +IA G A+GL +LH+K    +I+ D K  NILLD  F PK+SDFGLAKL    + S V T + GT GY APE      +T K+DVYS+G++  E ++GR+          +   +WA     +    I L DPRL+G      L +   VA  CIQ+    RP +  VV  L  + +    P
Sbjct:  156 RLLVYEFMPLGSLEDHLHDLPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWARPLFNDRRKFIKLADPRLKGRFPTRALYQALAVASMCIQEQAATRPLIADVVTALSYLANQAYDP 370          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.770e-35
Identity = 84/217 (38.71%), Postives = 127/217 (58.53%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTT-MRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPR 654
            R+LVY+++PN SLD  LF       LDW  RY+I  G ARG+ YLH+  R  IIH D+K  NILLDA+  PK++DFG+A++ G + +   T+ + GT GY++PE       + K+DVYS+G+++ E +SG++NS   +        S+A      G  L  L+DP +  N    E+ R  ++   C+Q+D   RP++  +V +L     VTL P+PR
Sbjct:  406 RVLVYEYVPNKSLDYFLFDPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIISGKKNSSFYQTDGAHDLVSYAWGLWSNGRPL-ELVDPAIVENCQRNEVVRCVHIGLLCVQEDPAERPTLSTIVLMLTS-NTVTL-PVPR 619          
The following BLAST results are available for this feature:
BLAST of CB250327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
CRK20_ARATH5.219e-3640.98Putative cysteine-rich receptor-like protein kinas... [more]
BRL3_ARATH5.219e-3640.85Receptor-like protein kinase BRI1-like 3 OS=Arabid... [more]
FEI2_ARATH8.902e-3641.12LRR receptor-like serine/threonine-protein kinase ... [more]
CRK13_ARATH8.902e-3639.17Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
Y5457_ARATH1.518e-3540.85Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH1.518e-3542.03Probable LRR receptor-like serine/threonine-protei... [more]
APK2B_ARATH1.518e-3540.29Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
CRK1_ARATH3.383e-3537.93Cysteine-rich receptor-like protein kinase 1 OS=Ar... [more]
PBS1_ARATH5.770e-3540.47Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
CRK10_ARATH5.770e-3538.71Cysteine-rich receptor-like protein kinase 10 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionEST0115 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ167 similar to putative receptor-like kinase (acc# NP_179503), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250327 ID=CB250327; Name=CB250327; organism=Citrus sinensis; type=EST; length=772bp
ACTAGTAGGTTGTTGGTCTACGATTTCATGCCAAACGGTTCTTTAGACTC
TCATCTCTTCACTGAAAAAGATTCAGACTTTCTTGATTGGAAGACAAGAT
ACCAAATTGCACTGGGGACAGCCAGAGGTTTGGCTTATCTTCATGAGAAG
TGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAGAACATTCTGTT
AGACGCTGAATTTTGTCCCAAAGTGTCGGATTTTGGGCTGGCAAAGCTTG
TTGGGAGGGAGTTCAGCCGTGTCCTAACAACCATGAGAGGAACAAGAGGT
TACCTTGCACCTGAACGGATTTCAGGAGTGGCCATAACAGCCAAAGCGGA
TGTCTACAGCTATGGAATGATGCTGTATGAATTTGTATCAGGAAGGAGGA
ACTCCCAGGAATCTGAAGATGGTAAAGTGAGGTTCTTCCCATCTTGGGCT
GCTAAACAAATAGTTGAAGGCAGCAATCTCATTAGCCTATTAGACCCAAG
ACTGGAGGGCAACGCTGACGAAGAAGAGCTTGCAAGACTTTGCAATGTGG
CTTGTTGGTGCATCCAAGATGATGAGACTCACAGGCCATCAATGGGTCAA
GTAGTTCAAATTCTTGAGGGAGTTTTGGACGTGACACTGCCTCCAATTCC
CAGAGCTCTCCAAGTAATGGTCGATGACCATGAGCACGTAGTCTTCTTCA
CTGAATCATCCACATCTCAGAGTTCCCTGTCAAAGAGCAACAATTCAACT
GCTTCATCTCAAGCAAAGAGTA
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