CB250327

Overview
NameCB250327
Unique NameCB250327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK17_ARATH (Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana GN=CRK17 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 7.536e-35
Identity = 82/215 (38.14%), Postives = 129/215 (60.00%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMR--GTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESE-DGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLP 642
            +LLVY+F+PN SLD  LF     + LDW  R  I  G  RG+ YLH+  R  IIH D+K  NILLDA+  PK++DFG+A++ G +   V  T R  GT GY++PE ++    + K+DVYS+G+++ E +SG++NS   + DG V    ++  K + E   +  L+DP ++ +   +E+ R  ++   C+Q++   RP+M  + Q+L     +TLP
Sbjct:  428 KLLVYEFVPNKSLDYFLFDPNKRNQLDWTVRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVD-QTVANTARVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWK-LWENKTMHELIDPFIKEDCKSDEVIRYVHIGLLCVQENPADRPTMSTIHQVLT-TSSITLP 639          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 147.517 bits (371), Expect = 7.536e-35
Identity = 82/213 (38.50%), Postives = 126/213 (59.15%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTT-MRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLP 642
            R+LVY++MPN SLD  LF     + LDW  RY++  G ARG+ YLH+  R  IIH D+K  NILLDA+  PK++DFGLA++ G + ++  T+ + GT GY+APE       + K+DVYS+G+++ E +SG++N+   E        + A +    G+ L  L+DP +  N  + E+ R  ++   C+Q+D   RP +  +  +L     VTLP
Sbjct:  406 RILVYEYMPNKSLDYFLFDPAKQNQLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGTFGYMAPEYAIHGQFSVKSDVYSFGVLVLEIISGKKNNSFYETDGAHDLVTHAWRLWSNGTAL-DLVDPIIIDNCQKSEVVRCIHICLLCVQEDPAERPILSTIFMMLTS-NTVTLP 616          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.843e-35
Identity = 84/211 (39.81%), Postives = 123/211 (58.29%), Query Frame = 1
Query:    1 TSRLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKL--VGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRL--EGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG 621
            T RLLVY+F+P+ SLD  +F     + L+W+ RY+I  G ARGL YLH+  R  IIH D+K  NILLD E  PK++DFG+A+L  +     R    + GT GY+APE +     + K DVYS+G+++ E +SG++NS  S +  +    S+A +   EG  L +L+D  L    +     + R  N+   C+Q+    RPSM  VV +L+G
Sbjct:  411 TERLLVYEFLPHTSLDKFIFDPIQGNELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARLFDIDHTTQRYTNRIVGTFGYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGKKNSGFSSEDSMGDLISFAWRNWKEGVAL-NLVDKILMTMSSYSSNMIMRCINIGLLCVQEKVAERPSMASVVLMLDG 620          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 147.132 bits (370), Expect = 9.843e-35
Identity = 78/218 (35.78%), Postives = 131/218 (60.09%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESE-DGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGV-LDVTLPPIP 651
            ++LVY++MPN SLD  LF  +    LDW+TRY I  G  RG+ YLH+  R  IIH D+K  NILLD +  PK++DFG+A+    + +   T  + GT GY+ PE ++    + K+DVYS+G+++ E + G+++S   E DG V    ++  + +    + + L+DP +  + D++E+ R  +++  C+Q++   RP+M  V Q+L    L + +P +P
Sbjct:  404 KILVYEYMPNKSLDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEIIVGKKSSSFHEIDGSVGNLVTYVWR-LWNNESFLELVDPAMGESYDKDEVIRCIHISLLCVQENPADRPTMSTVFQMLTNTFLTLPVPQLP 620          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.843e-35
Identity = 86/210 (40.95%), Postives = 126/210 (60.00%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDF--LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAK--LVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGV 624
            RLLVY+FMP GSL++HLF  +   F  L WK R ++ALG A+GLA+LH      +I+ D K  NILLD+E+  K+SDFGLAK   +G + S V T + GT GY APE ++   +T K+DVYS+G++L E +SGRR   ++     R    WA   +V    +  ++D RL+     EE  ++  ++  C+  +   RP+M +VV  LE +
Sbjct:  147 RLLVYEFMPRGSLENHLF-RRGLYFQPLSWKLRLKVALGAAKGLAFLHSS-ETRVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDK-SHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLVNKRKIFRVIDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVVSHLEHI 353          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK14_ARATH (Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana GN=CRK14 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.285e-34
Identity = 78/205 (38.05%), Postives = 120/205 (58.54%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNS-QESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            ++LVY+F+PN SLD  LF       LDW  RY I  G  RG+ YLH+  R  IIH D+K  NILLDA+  PK++DFG+A++ G + S   T  + GTRGY+ PE +     + ++DVYS+G+++ E + GR N      D  V    ++A + +    + + L+DP +  N + EE+ R  ++A  C+Q + T RPS+  +  +L
Sbjct:  405 KILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIRGITRGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGIDQSGANTKKIAGTRGYMPPEYVRQGQFSTRSDVYSFGVLVLEIICGRNNRFIHQSDTTVENLVTYAWR-LWRNDSPLELVDPTISENCETEEVTRCIHIALLCVQHNPTDRPSLSTINMML 608          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.679e-34
Identity = 80/207 (38.65%), Postives = 129/207 (62.32%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLV--GREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADE--EELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            +LL+Y++ PNG+L   L   ++   LDW+TRY+IA+G A+GLAYLH  C   I+H D+K  NILLD+++   ++DFGLAKL+     +   ++ + G+ GY+APE    + IT K+DVYSYG++L E +SG R++ E + G       W  K++      +S+LD +L+G  D+  +E+ +   +A +C+      RP+M +VV +L
Sbjct:  847 KLLLYNYFPNGNLQQLLQGNRN---LDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLDSKYEAILADFGLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILSG-RSAVEPQIGDGLHIVEWVKKKMGTFEPALSVLDVKLQGLPDQIVQEMLQTLGIAMFCVNPSPVERPTMKEVVTLL 1049          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.679e-34
Identity = 87/211 (41.23%), Postives = 124/211 (58.77%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDS-DFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRR----NSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGV 624
            +LLVY++M NGSLD  L  +    + LDW  R +IA+G ARGLA+LH      IIH DIK  NILLD +F PKV+DFGLA+L+    S V T + GT GY+ PE       T K DVYS+G++L E V+G+     + +ESE G +     WA ++I +G   + ++DP L   A +    RL  +A  C+ +    RP+M  V++ L+ +
Sbjct:  986 KLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVADFGLARLISACESHVSTVIAGTFGYIPPEYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGGNL---VGWAIQKINQG-KAVDVIDPLLVSVALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALKEI 1192          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK21_ARATH (Cysteine-rich receptor-like protein kinase 21 OS=Arabidopsis thaliana GN=CRK21 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.679e-34
Identity = 83/214 (38.79%), Postives = 126/214 (58.88%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESE-DGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLP 642
            ++LVY+F+PN SLD  LF       LDW  R+ I  G  RG+ YLH+  R  IIH D+K  NILLDAE  PK++DFGLA+      +   T  + GT GY+ PE ++    + K+DVYS+G+++ E + G++NS   + DG V    +   +    GS L+ L+DP +  N D++E+ R  ++   C+Q++   RPSM  + ++L  V  +TLP
Sbjct:  432 KILVYEFVPNKSLDHFLFDPIKRVQLDWPRRHNIIEGITRGILYLHQDSRLTIIHRDLKASNILLDAEMNPKIADFGLARNFRVNQTEANTGRVVGTFGYMPPEYVANGQFSTKSDVYSFGVLILEIIGGKKNSSFHQIDGSVSNLVTHVWRLRNNGS-LLELVDPAIGENYDKDEVIRCIHIGLLCVQENPDDRPSMSTIFRMLTNV-SITLP 643          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y5707_ARATH (Probable receptor-like protein kinase At5g47070 OS=Arabidopsis thaliana GN=At5g47070 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.193e-34
Identity = 81/209 (38.76%), Postives = 121/209 (57.89%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMR-GTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLD 630
            RLLVY++M N SL+ HLF  + S  L WK R +I LG A GL YLH+     +I+ D K  N+LLD +FCPK+SDFGLA+      +  +TT R GT GY APE +    +  K+DVYS+G++LYE ++GRR  + ++    R    W  +   +      ++DPRL  N        L  +A  C++ ++  RP+M  VV+ L+ +++
Sbjct:  166 RLLVYEYMSNRSLEDHLFPRR-SHTLPWKKRLEIMLGAAEGLTYLHDLK---VIYRDFKSSNVLLDDQFCPKLSDFGLAREGPDGDNTHVTTARVGTHGYAAPEYVQTGHLRLKSDVYSFGVVLYEIITGRRTIERNKPVAERRLLDWVKEYPADSQRFSMIVDPRLRNNYPAAGARSLAKLADLCLKKNDKERPTMEIVVERLKKIIE 370          
The following BLAST results are available for this feature:
BLAST of CB250327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
CRK17_ARATH7.536e-3538.14Cysteine-rich receptor-like protein kinase 17 OS=A... [more]
CRK15_ARATH7.536e-3538.50Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
CRK26_ARATH9.843e-3539.81Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
CRK16_ARATH9.843e-3535.78Putative cysteine-rich receptor-like protein kinas... [more]
APK1A_ARATH9.843e-3540.95Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
CRK14_ARATH1.285e-3438.05Cysteine-rich receptor-like protein kinase 14 OS=A... [more]
Y1341_ARATH1.679e-3438.65Probable LRR receptor-like serine/threonine-protei... [more]
EXS_ARATH1.679e-3441.23Leucine-rich repeat receptor protein kinase EXS OS... [more]
CRK21_ARATH1.679e-3438.79Cysteine-rich receptor-like protein kinase 21 OS=A... [more]
Y5707_ARATH2.193e-3438.76Probable receptor-like protein kinase At5g47070 OS... [more]

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Properties
Property NameValue
Genbank descriptionEST0115 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ167 similar to putative receptor-like kinase (acc# NP_179503), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250327 ID=CB250327; Name=CB250327; organism=Citrus sinensis; type=EST; length=772bp
ACTAGTAGGTTGTTGGTCTACGATTTCATGCCAAACGGTTCTTTAGACTC
TCATCTCTTCACTGAAAAAGATTCAGACTTTCTTGATTGGAAGACAAGAT
ACCAAATTGCACTGGGGACAGCCAGAGGTTTGGCTTATCTTCATGAGAAG
TGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAGAACATTCTGTT
AGACGCTGAATTTTGTCCCAAAGTGTCGGATTTTGGGCTGGCAAAGCTTG
TTGGGAGGGAGTTCAGCCGTGTCCTAACAACCATGAGAGGAACAAGAGGT
TACCTTGCACCTGAACGGATTTCAGGAGTGGCCATAACAGCCAAAGCGGA
TGTCTACAGCTATGGAATGATGCTGTATGAATTTGTATCAGGAAGGAGGA
ACTCCCAGGAATCTGAAGATGGTAAAGTGAGGTTCTTCCCATCTTGGGCT
GCTAAACAAATAGTTGAAGGCAGCAATCTCATTAGCCTATTAGACCCAAG
ACTGGAGGGCAACGCTGACGAAGAAGAGCTTGCAAGACTTTGCAATGTGG
CTTGTTGGTGCATCCAAGATGATGAGACTCACAGGCCATCAATGGGTCAA
GTAGTTCAAATTCTTGAGGGAGTTTTGGACGTGACACTGCCTCCAATTCC
CAGAGCTCTCCAAGTAATGGTCGATGACCATGAGCACGTAGTCTTCTTCA
CTGAATCATCCACATCTCAGAGTTCCCTGTCAAAGAGCAACAATTCAACT
GCTTCATCTCAAGCAAAGAGTA
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