CB250327

Overview
NameCB250327
Unique NameCB250327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.193e-34
Identity = 77/207 (37.20%), Postives = 122/207 (58.94%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGRE---FSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRL-EGNADEEELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            R+L+Y+F  N SLD ++F       LDW+TRY+I  G ARGL YLHE  R  I+H D+K  N+LLD    PK++DFG+AKL   +    +R  + + GT GY+APE       + K DV+S+G+++ E + G++N+   E+    F  S+  K   EG  +++++DP L E     +E+ +  ++   C+Q++   RP+M  VV +L
Sbjct:  413 RILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFDTDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIKGKKNNWSPEEDSSLFLLSYVWKSWREG-EVLNIVDPSLVETIGVSDEIMKCIHIGLLCVQENAESRPTMASVVVML 618          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.193e-34
Identity = 82/205 (40.00%), Postives = 122/205 (59.51%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESE-DGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            ++LVY+F+ N SLD  LF       LDW  RY+I  G ARG+ YLH+  R  IIH D+K  NILLDA+  PKV+DFG+A++ G + +   T  + GT GY+APE       + K+DVYS+G++++E +SG +NS   + D  V    ++  +    GS L  L+DP    N    ++ R  ++A  C+Q+D   RP+M  +VQ+L
Sbjct:  577 KILVYEFVHNKSLDYFLFDTTMKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAPEYAMYGQFSMKSDVYSFGVLVFEIISGMKNSSLYQMDDSVSNLVTYTWRLWSNGSQL-DLVDPSFGDNYQTHDITRCIHIALLCVQEDVDDRPNMSAIVQML 780          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK19_ARATH (Cysteine-rich receptor-like protein kinase 19 OS=Arabidopsis thaliana GN=CRK19 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.193e-34
Identity = 83/221 (37.56%), Postives = 125/221 (56.56%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNS-----QESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIP 651
            ++LVY+F+PN SLD  LF       LDW  RY+I  G ARG+ YLH+  R  IIH D+K  NILLD +  PK++DFG+A++ G + +  +T  + GT GY++PE       + K+DVYS+G+++ E +SG +NS      ES    V +  +W   ++    +   L+DP    N    E+ R  ++A  C+Q+D   RP+M  +VQ+L   L     P P
Sbjct:  395 KILVYEFVPNKSLDHFLFDSTMKMKLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDDDMNPKIADFGMARIFGMDQTEAMTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGMKNSSLYQMDESVGNLVTY--TW---RLWSNGSPSELVDPSFGDNYQTSEITRCIHIALLCVQEDAEDRPTMSSIVQMLTTSLIALAEPRP 610          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK18_ARATH (Cysteine-rich receptor-like protein kinase 18 OS=Arabidopsis thaliana GN=CRK18 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.193e-34
Identity = 86/219 (39.27%), Postives = 129/219 (58.90%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMR--GTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESE-DGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG---VLDVTLPP 645
            +LLVY+F+ N SLD  LF     + LDW  R  I  G  RG+ YLH+  R  IIH D+K  NILLDA+  PK++DFG+A++ G +   V  T R  GT GY++PE ++    + K+DVYS+G+++ E +SG++NS   + DG V    ++  K + E  +L  LLDP +  +   EE+ R  ++   C+Q++   RP+M  + Q+L      L V LPP
Sbjct:  408 KLLVYEFVSNKSLDYFLFDPTKRNQLDWTMRRNIIGGITRGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGMARIFGVD-QTVANTGRVVGTFGYMSPEYVTHGQFSMKSDVYSFGVLILEIISGKKNSSFYQMDGLVNNLVTYVWK-LWENKSLHELLDPFINQDFTSEEVIRYIHIGLLCVQENPADRPTMSTIHQMLTNSSITLPVPLPP 624          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK12_ARATH (Putative cysteine-rich receptor-like protein kinase 12 OS=Arabidopsis thaliana GN=CRK12 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.864e-34
Identity = 84/219 (38.36%), Postives = 125/219 (57.08%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMR--GTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRN-SQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG---VLDVTLPP 645
            ++LVY+F+PN SLD  LF       LDW  RY I  G  RG+ YLH+  R  IIH D+K  NILLDA+  PK++DFG+A++ G + S V  T R  GT GY+ PE +     + K+DVYS+G+++ E + G++N S    D K     ++  +    GS L  L+D  +  N   EE+ R  ++A  C+Q+D   RP++  ++ +L     +L V  PP
Sbjct:  436 KILVYEFVPNKSLDYFLFDPTKQGQLDWTKRYNIIGGITRGILYLHQDSRLTIIHRDLKASNILLDADMIPKIADFGMARISGIDQS-VANTKRIAGTFGYMPPEYVIHGQFSMKSDVYSFGVLILEIICGKKNRSFYQADTKAENLVTYVWRLWTNGSPL-ELVDLTISENCQTEEVIRCIHIALLCVQEDPKDRPNLSTIMMMLTNSSLILSVPQPP 652          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.740e-34
Identity = 81/205 (39.51%), Postives = 115/205 (56.10%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEK-DSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILE 618
            R+LVYDF+ NG+L+  +  +  D   L W  R  I LG A+GLAYLHE     ++H DIK  NILLD ++  KVSDFGLAKL+G E S V T + GT GY+APE      +  K+D+YS+G+++ E ++GR     S          W  K +V       ++DP++      + L R+  VA  C+  D   RP MG ++ +LE
Sbjct:  223 RMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVMGTFGYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLVDW-LKSMVGNRRSEEVVDPKIPEPPSSKALKRVLLVALRCVDPDANKRPKMGHIIHMLE 426          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 145.206 bits (365), Expect = 3.740e-34
Identity = 82/207 (39.61%), Postives = 115/207 (55.56%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSD-FLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGV 624
            RLL+Y +M NGSLD  L    D    L WKTR +IA G A+GL YLHE C   I+H DIK  NILLD  F   ++DFGLA+L+    + V T + GT GY+ PE       T K DVYS+G++L E ++ +R     +    R   SW  K   E S    + DP +    +++E+ R+  +AC C+ ++   RP+  Q+V  L+ V
Sbjct:  803 RLLIYSYMENGSLDYWLHERNDGPALLKWKTRLRIAQGAAKGLLYLHEGCDPHILHRDIKSSNILLDENFNSHLADFGLARLMSPYETHVSTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTDKRPVDMCKPKGCRDLISWVVKMKHE-SRASEVFDPLIYSKENDKEMFRVLEIACLCLSENPKQRPTTQQLVSWLDDV 1008          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.380e-34
Identity = 85/217 (39.17%), Postives = 126/217 (58.06%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDF--LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAK--LVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPP 645
            RLLVY+FM  GSL++HLF   + DF  L W  R ++AL  A+GLA+LH      +I+ DIK  NILLD++F  K+SDFGLA+   +G + S V T + GT GY APE +S   + A++DVYS+G++L E + GR+    +   K +    WA   +     ++ ++D RL      E   RL ++A  C+  +   RP+M QVV+ L  + D  + P
Sbjct:  140 RLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVK-VIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQ-SYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPYLTSRRKVLLIVDTRLNSQYKPEGAVRLASIAVQCLSFEPKSRPTMDQVVRALVQLQDSVVKP 354          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.380e-34
Identity = 80/204 (39.22%), Postives = 113/204 (55.39%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDF-LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            RLLVY+++ NG+LD  L T  D    L W  R ++ALGTA+ L YLHE C   I+H + K  NILLD E  P +SD GLA L      +V T + G+ GY APE       T K+DVY++G+++ E ++GR+    S     +    WA  Q+ +   L  ++DP L G    + L+R  ++   CIQ +   RP M +VVQ L
Sbjct:  466 RLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPNTERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSSRTRAEQSLVRWATPQLHDIDALSKMVDPSLNGMYPAKSLSRFADIIALCIQPEPEFRPPMSEVVQQL 669          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: NORK_MEDTR (Nodulation receptor kinase OS=Medicago truncatula GN=NORK PE=1 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 6.380e-34
Identity = 87/209 (41.63%), Postives = 115/209 (55.02%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDS-DFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGRE-FSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVL 627
            ++LVY FM NGSL   L+ E      LDW TR  IALG ARGLAYLH      +IH D+K  NILLD   C KV+DFG +K   +E  S V   +RGT GYL PE      ++ K+DV+S+G++L E VSGR                W AK  +  S +  ++DP ++G    E L R+  VA  C++   T+RP M  +V+ LE  L
Sbjct:  665 QILVYPFMSNGSLLDRLYGEASKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDQSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRIEWSLVEW-AKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDAL 872          
The following BLAST results are available for this feature:
BLAST of CB250327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
CRK41_ARATH2.193e-3437.20Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
CRK23_ARATH2.193e-3440.00Putative cysteine-rich receptor-like protein kinas... [more]
CRK19_ARATH2.193e-3437.56Cysteine-rich receptor-like protein kinase 19 OS=A... [more]
CRK18_ARATH2.193e-3439.27Cysteine-rich receptor-like protein kinase 18 OS=A... [more]
CRK12_ARATH2.864e-3438.36Putative cysteine-rich receptor-like protein kinas... [more]
Y1154_ARATH3.740e-3439.51Probable serine/threonine-protein kinase At1g01540... [more]
PSKR1_ARATH3.740e-3439.61Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y3545_ARATH6.380e-3439.17Probable receptor-like protein kinase At3g55450 OS... [more]
SRF8_ARATH6.380e-3439.22Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
NORK_MEDTR6.380e-3441.63Nodulation receptor kinase OS=Medicago truncatula ... [more]

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Properties
Property NameValue
Genbank descriptionEST0115 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ167 similar to putative receptor-like kinase (acc# NP_179503), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250327 ID=CB250327; Name=CB250327; organism=Citrus sinensis; type=EST; length=772bp
ACTAGTAGGTTGTTGGTCTACGATTTCATGCCAAACGGTTCTTTAGACTC
TCATCTCTTCACTGAAAAAGATTCAGACTTTCTTGATTGGAAGACAAGAT
ACCAAATTGCACTGGGGACAGCCAGAGGTTTGGCTTATCTTCATGAGAAG
TGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAGAACATTCTGTT
AGACGCTGAATTTTGTCCCAAAGTGTCGGATTTTGGGCTGGCAAAGCTTG
TTGGGAGGGAGTTCAGCCGTGTCCTAACAACCATGAGAGGAACAAGAGGT
TACCTTGCACCTGAACGGATTTCAGGAGTGGCCATAACAGCCAAAGCGGA
TGTCTACAGCTATGGAATGATGCTGTATGAATTTGTATCAGGAAGGAGGA
ACTCCCAGGAATCTGAAGATGGTAAAGTGAGGTTCTTCCCATCTTGGGCT
GCTAAACAAATAGTTGAAGGCAGCAATCTCATTAGCCTATTAGACCCAAG
ACTGGAGGGCAACGCTGACGAAGAAGAGCTTGCAAGACTTTGCAATGTGG
CTTGTTGGTGCATCCAAGATGATGAGACTCACAGGCCATCAATGGGTCAA
GTAGTTCAAATTCTTGAGGGAGTTTTGGACGTGACACTGCCTCCAATTCC
CAGAGCTCTCCAAGTAATGGTCGATGACCATGAGCACGTAGTCTTCTTCA
CTGAATCATCCACATCTCAGAGTTCCCTGTCAAAGAGCAACAATTCAACT
GCTTCATCTCAAGCAAAGAGTA
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