CB250327

Overview
NameCB250327
Unique NameCB250327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK43_ARATH (Putative cysteine-rich receptor-like protein kinase 43 OS=Arabidopsis thaliana GN=CRK43 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.332e-34
Identity = 83/216 (38.43%), Postives = 125/216 (57.87%), Query Frame = 1
Query:   13 LVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLV---GREF---SRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLP 642
            +VY+F+ N SLD  LF  +    LDWK R  I LGTA GL YLHE C+  IIH DIK  NILLD ++ PK+SDFGLAK     G++    S   +++ GT GY+APE IS   ++ K D YS+G+++ E  SG RN++   D  +    +   K     + +  ++D  +  + D++E+ R+  +   C Q+    RP+M +V+Q++    D+ LP
Sbjct:  402 IVYEFLANTSLDHILFNPEKKKELDWKKRRTIILGTAEGLEYLHETCK--IIHRDIKASNILLDLKYKPKISDFGLAKFYPEGGKDIPASSLSPSSIAGTLGYMAPEYISKGRLSNKIDAYSFGVLVLEITSGFRNNKFRSDNSLETLVTQVWK-CFASNKMEEMIDKDMGEDTDKQEMKRVMQIGLLCTQESPQLRPTMSKVIQMVSST-DIVLP 613          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK42_ARATH (Cysteine-rich receptor-like protein kinase 42 OS=Arabidopsis thaliana GN=CRK42 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.332e-34
Identity = 89/229 (38.86%), Postives = 126/229 (55.02%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRR-NSQESEDGKV--RFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILE----GVLDVTLPPIPRALQVMVD 675
            LLVY+++PN SLD  LF E  S  L+W  R  I LGTA GLAYLH      IIH DIK  N+LLD +  PK++DFGLA+  G + + + T + GT GY+APE +    +T KADVYS+G+++ E   G R N+   E G +  R +  +   ++VE  +   L D  L+    E E  ++  V   C Q   + RPSM +V+++L      +   T PP  R   +  D
Sbjct:  385 LLVYEYVPNKSLDQFLFDESQSKVLNWSQRLNIILGTAEGLAYLHGGSPVRIIHRDIKTSNVLLDDQLNPKIADFGLARCFGLDKTHLSTGIAGTLGYMAPEYVVRGQLTEKADVYSFGVLVLEIACGTRINAFVPETGHLLQRVWNLYTLNRLVEALD-PCLKDEFLQVQGSEAEACKVLRVGLLCTQASPSLRPSMEEVIRMLTERDYPIPSPTSPPFLRVSSLTTD 612          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 8.332e-34
Identity = 86/209 (41.15%), Postives = 123/209 (58.85%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDF--LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGR-EFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGV 624
            RLLVY+FMP GSL++HLF  + S F  L W  R ++ALG A+GLA+LH      +I+ D K  NILLD+E+  K+SDFGLAK     + S V T + GT GY APE ++   +T K+DVYSYG++L E +SGRR   ++     +    WA   +     L  ++D RL+     EE  ++  +A  C+  +   RP+M +VV  LE +
Sbjct:  148 RLLVYEFMPRGSLENHLF-RRGSYFQPLSWTLRLKVALGAAKGLAFLHN-AETSVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARPLLANKRKLFRVIDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVVSHLEHI 354          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.088e-33
Identity = 87/209 (41.63%), Postives = 115/209 (55.02%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDS-DFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGRE-FSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVL 627
            ++LVY FM NGSL   L+ E      LDW TR  IALG ARGLAYLH      +IH D+K  NILLD   C KV+DFG +K   +E  S V   +RGT GYL PE      ++ K+DV+S+G++L E VSGR                W AK  +  S +  ++DP ++G    E L R+  VA  C++   T+RP M  +V+ LE  L
Sbjct:  664 QILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEW-AKPYIRASKVDEIVDPGIKGGYHAEALWRVVEVALQCLEPYSTYRPCMVDIVRELEDAL 871          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK35_ARATH (Putative cysteine-rich receptor-like protein kinase 35 OS=Arabidopsis thaliana GN=CRK35 PE=3 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 1.088e-33
Identity = 80/221 (36.20%), Postives = 125/221 (56.56%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNS---QESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPRA 657
            ++LVY+F+PN SLD  LF       LDW  RY I  G ARG+ YLH+  R  IIH D+K  NILLDA+  PK++DFG+A++ G + S+  T  + GT GY++PE       + K+DVYS+G+++ E +SG++NS      + G      +W   ++    + + L+DP +  +    E  R  ++A  C+Q+D   RP +  ++ +L      T   +PRA
Sbjct:  414 KILVYEFVPNKSLDYFLFDPAKQGELDWTRRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIADFGMARIFGVDQSQANTRRIAGTFGYMSPEYAMRGHFSMKSDVYSFGVLVLEIISGKKNSSFYNIDDSGSNLVTHAW---RLWRNGSPLELVDPTIGESYQSSEATRCIHIALLCVQEDPADRPLLPAIIMMLTS--STTTLHVPRA 629          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.421e-33
Identity = 80/210 (38.10%), Postives = 116/210 (55.24%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTE--KDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDV 633
            LL+YD++PNGSLDS L+++  +    L W  R+QIA G A GL YLHE+    +IH D+KP N+L+D++  P++ DFGLA+L  R      T + GT GY+APE       ++ +DV+++G++L E VSGR+ +    D    F   W  +    G  ++S +DPRL    DE E      V   C       RP M  V++ L    DV
Sbjct:  434 LLIYDYIPNGSLDSLLYSKPRRSGAVLSWNARFQIAKGIASGLLYLHEEWEQIVIHRDVKPSNVLIDSDMNPRLGDFGLARLYERGSQSCTTVVVGTIGYMAPELARNGNSSSASDVFAFGVLLLEIVSGRKPT----DSGTFFIADWVMELQASG-EILSAIDPRLGSGYDEGEARLALAVGLLCCHHKPESRPLMRMVLRYLNRDEDV 638          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.421e-33
Identity = 83/220 (37.73%), Postives = 126/220 (57.27%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNS---QESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPR 654
            ++LVY+F+ N SLD  LF  K    LDWK RY I  G  RGL YLH+  R  IIH DIK  NILLDA+  PK++DFG+A+    + +   T  + GT GY+ PE ++    + K+DVYS+G+++ E V G++NS   Q  + G       W   ++    + + L+DP ++ + D +E+ R  ++   C+Q+    RP M  + Q+L     +TL P+PR
Sbjct:  408 QILVYEFVSNKSLDYFLFDPKMKSQLDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDQTGRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFFQMDDSGGNLVTHVW---RLWNNDSPLDLIDPAIKESYDNDEVIRCIHIGILCVQETPADRPEMSTIFQMLTN-SSITL-PVPR 622          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK5_ARATH (Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=CRK5 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.856e-33
Identity = 80/205 (39.02%), Postives = 123/205 (60.00%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESE-DGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            ++LVY+F+ N SLD  LF  +    LDW TRY+I  G ARG+ YLH+  R  IIH D+K  NILLDA+  PKV+DFG+A++   + +   T  + GT GY++PE       + K+DVYS+G+++ E +SGR+NS   + D       ++  +   +GS L  L+D     +    E+ R  ++A  C+Q+D  +RP+M  +VQ+L
Sbjct:  409 KILVYEFVSNKSLDYFLFDSRMQSQLDWTTRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFEIDQTEAHTRRVVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGRKNSSLYQMDASFGNLVTYTWRLWSDGSPL-DLVDSSFRDSYQRNEIIRCIHIALLCVQEDTENRPTMSAIVQML 612          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y4291_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g29180 OS=Arabidopsis thaliana GN=At4g29180 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.424e-33
Identity = 76/219 (34.70%), Postives = 129/219 (58.90%), Query Frame = 1
Query:    4 SRLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGR-EFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPRA 657
            S  L+Y++M NG+L  +L +E   D L W+ R  IA+ +A+GL YLH  CR  I+H D+K  NILL+     K++DFGL+K+    + S V+T + GT GY+ PE  +   +  K+DVYS+G++L E ++G+R+  +++DG+      +  +  ++  ++  ++DPRL G+       +   VA  C++D  T+RP+  Q+V  L+  L   L   P++
Sbjct:  648 SMALIYEYMANGNLQDYLSSENAED-LSWEKRLHIAIDSAQGLEYLHHGCRPPIVHRDVKTANILLNDNLEAKIADFGLSKVFPEDDLSHVVTAVMGTPGYVDPEYYNTFKLNEKSDVYSFGIVLLELITGKRSIMKTDDGEKMNVVHY-VEPFLKMGDIDGVVDPRLHGDFSSNSAWKFVEVAMSCVRDRGTNRPNTNQIVSDLKQCLAAELAREPKS 864          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.424e-33
Identity = 78/205 (38.05%), Postives = 117/205 (57.07%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFT-EKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKL-VGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            RLLVY++MP GSL+ HL         LDW TR +IA G ARGL YLH++    +I+ D+K  NILL  ++ PK+SDFGLAK+    + + V T + GT GY AP+      +T K+D+YS+G++L E ++GR+    ++  K +    WA     +  N   ++DP L+G      L +   ++  C+Q+  T RP +  VV  L
Sbjct:  173 RLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWARPLFKDRRNFPKMVDPLLQGQYPVRGLYQALAISAMCVQEQPTMRPVVSDVVLAL 377          
The following BLAST results are available for this feature:
BLAST of CB250327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
CRK43_ARATH8.332e-3438.43Putative cysteine-rich receptor-like protein kinas... [more]
CRK42_ARATH8.332e-3438.86Cysteine-rich receptor-like protein kinase 42 OS=A... [more]
APK1B_ARATH8.332e-3441.15Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
NORK_PEA1.088e-3341.63Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
CRK35_ARATH1.088e-3336.20Putative cysteine-rich receptor-like protein kinas... [more]
LRKA3_ARATH1.421e-3338.10Lectin-domain containing receptor kinase A4.3 OS=A... [more]
CRK31_ARATH1.421e-3337.73Putative cysteine-rich receptor-like protein kinas... [more]
CRK5_ARATH1.856e-3339.02Cysteine-rich receptor-like protein kinase 5 OS=Ar... [more]
Y4291_ARATH2.424e-3334.70Probable LRR receptor-like serine/threonine-protei... [more]
RLCK7_ARATH2.424e-3338.05Probable serine/threonine-protein kinase RLCKVII O... [more]

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Properties
Property NameValue
Genbank descriptionEST0115 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ167 similar to putative receptor-like kinase (acc# NP_179503), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250327 ID=CB250327; Name=CB250327; organism=Citrus sinensis; type=EST; length=772bp
ACTAGTAGGTTGTTGGTCTACGATTTCATGCCAAACGGTTCTTTAGACTC
TCATCTCTTCACTGAAAAAGATTCAGACTTTCTTGATTGGAAGACAAGAT
ACCAAATTGCACTGGGGACAGCCAGAGGTTTGGCTTATCTTCATGAGAAG
TGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAGAACATTCTGTT
AGACGCTGAATTTTGTCCCAAAGTGTCGGATTTTGGGCTGGCAAAGCTTG
TTGGGAGGGAGTTCAGCCGTGTCCTAACAACCATGAGAGGAACAAGAGGT
TACCTTGCACCTGAACGGATTTCAGGAGTGGCCATAACAGCCAAAGCGGA
TGTCTACAGCTATGGAATGATGCTGTATGAATTTGTATCAGGAAGGAGGA
ACTCCCAGGAATCTGAAGATGGTAAAGTGAGGTTCTTCCCATCTTGGGCT
GCTAAACAAATAGTTGAAGGCAGCAATCTCATTAGCCTATTAGACCCAAG
ACTGGAGGGCAACGCTGACGAAGAAGAGCTTGCAAGACTTTGCAATGTGG
CTTGTTGGTGCATCCAAGATGATGAGACTCACAGGCCATCAATGGGTCAA
GTAGTTCAAATTCTTGAGGGAGTTTTGGACGTGACACTGCCTCCAATTCC
CAGAGCTCTCCAAGTAATGGTCGATGACCATGAGCACGTAGTCTTCTTCA
CTGAATCATCCACATCTCAGAGTTCCCTGTCAAAGAGCAACAATTCAACT
GCTTCATCTCAAGCAAAGAGTA
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