CB250327

Overview
NameCB250327
Unique NameCB250327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.680e-32
Identity = 81/210 (38.57%), Postives = 115/210 (54.76%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTE--KDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDV 633
            LL+YD++PNGSLDS L++   +    L W  R++IA G A GL YLHE+    +IH DIKP N+L++ +  P++ DFGLA+L  R      T + GT GY+APE       ++ +DV+++G++L E VSGRR +    D    F   W  +    G  ++  +DPRL    D  E      V   C     T RPSM  V++ L G  DV
Sbjct:  433 LLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTIGYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPT----DSGTFFLADWVMELHARG-EILHAVDPRLGFGYDGVEARLALVVGLLCCHQRPTSRPSMRTVLRYLNGDDDV 637          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK2_ARATH (Cysteine-rich receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=CRK2 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.572e-32
Identity = 79/220 (35.91%), Postives = 125/220 (56.82%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNAD------EEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIP 651
            LLVY+++ N SLD  +F       LDW+ RY I +GTA GL YLHE+    IIH DIK  NILLD++   K++DFGLA+    + S + T + GT GY+APE ++   +T   DVYS+G+++ E V+G++N++           + A K    G  L  + DP L+  +       ++E+AR+  +   C Q+  + RP M +++ +L+   +V   P+P
Sbjct:  395 LLVYEYLQNKSLDRFIFDVNRGKTLDWQRRYTIIVGTAEGLVYLHEQSSVKIIHRDIKASNILLDSKLQAKIADFGLARSFQDDKSHISTAIAGTLGYMAPEYLAHGQLTEMVDVYSFGVLVLEIVTGKQNTKSKMSDYSDSLITEAWKHFQSG-ELEKIYDPNLDWKSQYDSHIIKKEIARVVQIGLLCTQEIPSLRPPMSKLLHMLKNKEEVL--PLP 611          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 4.572e-32
Identity = 79/220 (35.91%), Postives = 128/220 (58.18%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTT-MRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNS---QESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPR 654
            ++L+Y+F+ N SLD  LF  +    LDW  RY+I  G ARG+ YLH+  R  IIH D+K  NILLDA+  PK++DFGLA + G E ++  T  + GT  Y++PE       + K+D+YS+G+++ E +SG++NS   Q  E        ++A++ +    + + L+DP    N    E+ R  ++A  C+Q++   RP +  ++ +L     +TL P+PR
Sbjct:  419 QILIYEFVHNKSLDYFLFDPEKQSQLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASR-LWRNKSPLELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRPMLSTIILMLTS-NTITL-PVPR 635          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK4_ARATH (Cysteine-rich receptor-like protein kinase 4 OS=Arabidopsis thaliana GN=CRK4 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.971e-32
Identity = 75/205 (36.59%), Postives = 119/205 (58.05%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESE-DGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQIL 615
            R+LVY+F+PN SLD  +F       LDW  RY+I  G ARG+ YLH+  R  IIH D+K  NILL  +   K++DFG+A++ G + +   T  + GT GY++PE       + K+DVYS+G+++ E +SG++NS   + DG           ++    + + L+DP    N    E++R  ++A  C+Q++   RP+M  +VQ+L
Sbjct:  420 RILVYEFVPNKSLDYFIFDSTMQSLLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLGDDMNAKIADFGMARIFGMDQTEANTRRIVGTYGYMSPEYAMYGQFSMKSDVYSFGVLVLEIISGKKNSNVYQMDGTSAGNLVTYTWRLWSNGSPLELVDPSFRDNYRINEVSRCIHIALLCVQEEAEDRPTMSAIVQML 624          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.799e-32
Identity = 83/212 (39.15%), Postives = 115/212 (54.25%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFT-EKDSDF-LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKL--VGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDV 633
            +LVY++MP+G+L  HLF  +K SD  L WK R +I +G ARGL YLH   +  IIH DIK  NILLD  F  KVSDFGL+++       + V T ++GT GYL PE      +T K+DVYS+G++L E +  R    +S   +      W       G+ +  ++D  L  +     L + C +A  C+QD    RP M  VV  LE  L +
Sbjct:  589 VLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVSDFGLSRVGPTSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVLCCRPIRMQSVPPEQADLIRWVKSNYRRGT-VDQIIDSDLSADITSTSLEKFCEIAVRCVQDRGMERPPMNDVVWALEFALQL 799          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.799e-32
Identity = 83/209 (39.71%), Postives = 116/209 (55.50%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKL-VGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDV 633
            +LVY++M NG+L SHLF       L WK R +  +G+ARGL YLH      IIH D+K  NILLD  F  K+SDFGL+K     + + V T ++G+ GYL PE      +T K+DVYS+G++L+E V  R     +          WA     +  NL S++D  L GN   E L +   +A  C+ D+  +RP MG+V+  LE VL +
Sbjct:  590 ILVYEYMANGTLRSHLFGSNLPP-LSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMSDFGLSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEAVCARAVINPTLPKDQINLAEWALSW-QKQRNLESIIDSNLRGNYSPESLEKYGEIAEKCLADEGKNRPMMGEVLWSLEYVLQI 796          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: CRK32_ARATH (Putative cysteine-rich receptor-like protein kinase 32 OS=Arabidopsis thaliana GN=CRK32 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.019e-31
Identity = 82/228 (35.96%), Postives = 127/228 (55.70%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHLFTEKDSDFLD--------WKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLT-TMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNS---QESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDVTLPPIPR 654
            ++LVY+F+PN SL+  LF  K    LD        WK RY I  G  RGL YLH+  R  IIH DIK  NILLDA+  PK++DFG+A+    + +   T  + GT GY+ PE ++    + K+DVYS+G+++ E V G++NS   +  + G       W   ++    + + L+DP +E + D +++ R  ++   C+Q+    RP M  + Q+L     +TL P+PR
Sbjct:  390 QILVYEFVPNKSLNYFLFGNKQKHLLDPTKKSQLDWKRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRVDQTEDNTRRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIVCGKKNSSFYKIDDSGGNLVTHVW---RLWNNDSPLDLIDPAIEESCDNDKVIRCIHIGLLCVQETPVDRPEMSTIFQMLTN-SSITL-PVPR 612          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.269e-31
Identity = 82/208 (39.42%), Postives = 114/208 (54.81%), Query Frame = 1
Query:   13 LVYDFMPNGSLDSHLFTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKL-VGREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDV 633
            LVYD+M  G+L  HL+  K    L WK R +IA+G ARGL YLH   +  IIH D+K  NIL+D  +  KVSDFGL+K         V T ++G+ GYL PE      +T K+DVYS+G++L+E +  R     S   +      WA     +G NL  ++DP L+G  + E L +  + A  C+ D    RP+MG V+  LE  L +
Sbjct:  588 LVYDYMAFGTLREHLYNTKKPQ-LTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILVDENWVAKVSDFGLSKTGPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEILCARPALNPSLPKEQVSLGDWAMNCKRKG-NLEDIIDPNLKGKINAECLKKFADTAEKCLNDSGLERPTMGDVLWNLEFALQL 793          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.963e-31
Identity = 84/213 (39.44%), Postives = 122/213 (57.28%), Query Frame = 1
Query:    7 RLLVYDFMPNGSLDSHL--FTEKDSDFLDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLVGREFSRVLTTMR--GTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRNSQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRL----EGNADEEELARLCNVACWCIQDDETHRPSMGQVVQILEG 621
            RLLVYD+MPNG+L + L   + +D   L+W  R+ IALG ARGL +LH+     ++H DIKP+N+L DA+F   +SDFGL +L  R  SR   T    GT GY++PE      IT ++D+YS+G++L E ++G+R    ++D  +     W  KQ+  G  +  LL+P L      +++ EE      V   C   D   RP+M  VV +LEG
Sbjct:  911 RLLVYDYMPNGNLSTLLQEASHQDGHVLNWPMRHLIALGIARGLGFLHQSN---MVHGDIKPQNVLFDADFEAHISDFGLDRLTIRSPSRSAVTANTIGTLGYVSPEATLSGEITRESDIYSFGIVLLEILTGKRPVMFTQDEDI---VKWVKKQLQRG-QVTELLEPGLLELDPESSEWEEFLLGIKVGLLCTATDPLDRPTMSDVVFMLEG 1116          
BLAST of CB250327 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.963e-31
Identity = 81/221 (36.65%), Postives = 125/221 (56.56%), Query Frame = 1
Query:   10 LLVYDFMPNGSLDSHLFTEKDSDF--LDWKTRYQIALGTARGLAYLHEKCRDCIIHCDIKPENILLDAEFCPKVSDFGLAKLV-----GREFSRVLTTMRGTRGYLAPERISGVAITAKADVYSYGMMLYEFVSGRRN---SQESEDGKVRFFPSWAAKQIVEGSNLISLLDPRLEGNA---DEEELARLCNVACWCIQDDETHRPSMGQVVQILEGVLDV 633
            LL+Y+F+PNG+L  HL    D  +  L W+ R QIA  TA GLAYLH   +  I H D+K  NILLD +   KVSDFGL++LV         S + T  +GT GYL PE      +T K+DVYS+G++L E V+ ++    ++E ED  +  +      ++++   L   +DP L+  A   D + + +L N+A  C+ +   +RPSM +V   +E ++++
Sbjct:  433 LLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMY----INKMMDQERLTECIDPLLKKTANKIDMQTIQQLGNLASACLNERRQNRPSMKEVADEIEYIINI 649          
The following BLAST results are available for this feature:
BLAST of CB250327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 384
Match NameE-valueIdentityDescription
LRKA2_ARATH2.680e-3238.57Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK2_ARATH4.572e-3235.91Cysteine-rich receptor-like protein kinase 2 OS=Ar... [more]
CRK11_ARATH4.572e-3235.91Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
CRK4_ARATH5.971e-3236.59Cysteine-rich receptor-like protein kinase 4 OS=Ar... [more]
Y5900_ARATH7.799e-3239.15Putative receptor-like protein kinase At5g39000 OS... [more]
Y1357_ARATH7.799e-3239.71Probable receptor-like protein kinase At1g30570 OS... [more]
CRK32_ARATH1.019e-3135.96Putative cysteine-rich receptor-like protein kinas... [more]
ANX1_ARATH2.269e-3139.42Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]
Y4361_ARATH2.963e-3139.44Probable LRR receptor-like serine/threonine-protei... [more]
WAKLQ_ARATH2.963e-3136.65Wall-associated receptor kinase-like 20 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionEST0115 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ167 similar to putative receptor-like kinase (acc# NP_179503), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250327 ID=CB250327; Name=CB250327; organism=Citrus sinensis; type=EST; length=772bp
ACTAGTAGGTTGTTGGTCTACGATTTCATGCCAAACGGTTCTTTAGACTC
TCATCTCTTCACTGAAAAAGATTCAGACTTTCTTGATTGGAAGACAAGAT
ACCAAATTGCACTGGGGACAGCCAGAGGTTTGGCTTATCTTCATGAGAAG
TGCAGAGACTGCATCATACACTGTGACATAAAGCCAGAGAACATTCTGTT
AGACGCTGAATTTTGTCCCAAAGTGTCGGATTTTGGGCTGGCAAAGCTTG
TTGGGAGGGAGTTCAGCCGTGTCCTAACAACCATGAGAGGAACAAGAGGT
TACCTTGCACCTGAACGGATTTCAGGAGTGGCCATAACAGCCAAAGCGGA
TGTCTACAGCTATGGAATGATGCTGTATGAATTTGTATCAGGAAGGAGGA
ACTCCCAGGAATCTGAAGATGGTAAAGTGAGGTTCTTCCCATCTTGGGCT
GCTAAACAAATAGTTGAAGGCAGCAATCTCATTAGCCTATTAGACCCAAG
ACTGGAGGGCAACGCTGACGAAGAAGAGCTTGCAAGACTTTGCAATGTGG
CTTGTTGGTGCATCCAAGATGATGAGACTCACAGGCCATCAATGGGTCAA
GTAGTTCAAATTCTTGAGGGAGTTTTGGACGTGACACTGCCTCCAATTCC
CAGAGCTCTCCAAGTAATGGTCGATGACCATGAGCACGTAGTCTTCTTCA
CTGAATCATCCACATCTCAGAGTTCCCTGTCAAAGAGCAACAATTCAACT
GCTTCATCTCAAGCAAAGAGTA
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