CB250328

Overview
NameCB250328
Unique NameCB250328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 49/147 (33.33%), Postives = 82/147 (55.78%), Query Frame = 1
Query:  178 GAHSRLYHGIYK-DEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLH-KLEHKTLPLPKLIAIALDIARGMEYIH---SQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            G    +YHG  K  E VAVK++      ++ T  +   K+F  EV LL R+H+ N++  V  C +     ++ E+L  G L+ +L  K  +  +     + IAL+ A G+EY+H   +  ++HRD+K  N+L+D+ F  K+ADFG++
Sbjct:  573 GGFGMVYHGTVKGSEQVAVKVL-----SQSSTQGS---KEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLS 711          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: RIPK2_MOUSE (Receptor-interacting serine/threonine-protein kinase 2 OS=Mus musculus GN=Ripk2 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 53/161 (32.92%), Postives = 82/161 (50.93%), Query Frame = 1
Query:  142 LSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIP----DDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLH-KLEHKTLPLPKLIAIALDIARGMEYIHSQG--VIHRDLKPENVLIDQEFHLKIADFGIA 603
            L+ L    R A G  S   H  ++   VAVK + I     D + N+ L         RE  +L +     ++  +  C +P    ++TEY+  GSL   LH K E+  +  P    I  +IA G+ Y+H+    ++H DLK +N+L+D EFH+KIADFG++
Sbjct:   18 LADLHYLSRGASGTVSSARHADWRVR-VAVKHLHIHTPLLDSERNDIL---------REAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRKTEYPDIAWPLRFRILHEIALGVNYLHNMNPPLLHHDLKTQNILLDNEFHVKIADFGLS 168          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: IRAK1_HUMAN (Interleukin-1 receptor-associated kinase 1 OS=Homo sapiens GN=IRAK1 PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 49/151 (32.45%), Postives = 79/151 (52.32%), Query Frame = 1
Query:  163 LRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL--PKLIAIALDIARGMEYIH--SQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            L+   G    +Y  + ++   AVK  R+ ++ + E  A +  + F  EV  LSR  +PN++ F   C +   YC++  +L  GSL   LH       PL  P+ + I L  AR ++++H  S  +IH D+K  NVL+D+    K+ DFG+A
Sbjct:  216 LKIGEGGFGCVYRAVMRNTVYAVK--RLKENADLEWTAVK--QSFLTEVEQLSRFRHPNIVDFAGYCAQNGFYCLVYGFLPNGSLEDRLHCQTQACPPLSWPQRLDILLGTARAIQFLHQDSPSLIHGDIKSSNVLLDERLTPKLGDFGLA 362          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: ERBB4_HUMAN (Receptor tyrosine-protein kinase erbB-4 OS=Homo sapiens GN=ERBB4 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 47/149 (31.54%), Postives = 80/149 (53.69%), Query Frame = 1
Query:  178 GAHSRLYHGIYKDE------PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHK-TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            GA   +Y GI+  E      PVA+KI+       NET   +   +F  E  +++ + +P++++ +  C  P +  ++T+ +  G L  Y+H  EHK  +    L+   + IA+GM Y+  + ++HRDL   NVL+    H+KI DFG+A
Sbjct:  727 GAFGTVYKGIWVPEGETVKIPVAIKIL-------NETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVH--EHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 865          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: CIPKS_ORYSJ (CBL-interacting protein kinase 28 OS=Oryza sativa subsp. japonica GN=CIPK28 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 49/163 (30.06%), Postives = 86/163 (52.76%), Query Frame = 1
Query:  124 DEHTVDLSQLFLGLRFAHGAHSRLYHG--IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIK-FVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            +E +V + +  +G +   G   ++Y+   +   + VA+K+I     D+ + L   L +Q  RE++++  + +PNV++ F     K  +Y  + EY   G L    HK+    L           +   M+Y HS+GV HRDLKPEN+L+D+   LK++DFG++
Sbjct:    2 EERSVLMERYVIGRQLGQGTFGKVYYARNLSSGQSVAIKMI-----DKEKILKVGLMEQIKREISIMRLVRHPNVLQLFEVMATKSNIYFAL-EYAKGGEL---FHKMARAKLNEESARNYFQQLISAMDYCHSRGVYHRDLKPENLLLDENETLKVSDFGLS 155          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: BLK_MOUSE (Tyrosine-protein kinase Blk OS=Mus musculus GN=Blk PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 7.454e-15
Identity = 50/163 (30.67%), Postives = 83/163 (50.92%), Query Frame = 1
Query:  118 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDE-PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            A DE  +    L L  +   G    ++ G YK+   VA+K ++        T++    + F  E  ++  L +  +++  A   + P+Y ++TEY++ G L  +L   E   L LP+LI ++  +A GM YI     IHRDL+  N+L+ +    KIADFG+A
Sbjct:  224 AQDEWEIPRQSLKLVRKLGSGQFGEVWMGYYKNNMKVAIKTLK------EGTMSP---EAFLGEANVMKTLQHERLVRLYAVVTREPIY-IVTEYMARGCLLDFLKTDEGSRLSLPRLIDMSAQVAEGMAYIERMNSIHRDLRAANILVSETLCCKIADFGLA 376          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: ZAKA_DICDI (Dual specificity protein kinase zakA OS=Dictyostelium discoideum GN=zakA PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.735e-15
Identity = 50/153 (32.68%), Postives = 82/153 (53.59%), Query Frame = 1
Query:  202 GIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAAC----KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIAL--DIARGMEYIHSQGVIHRDLKPENVLID-------------QEFHLKIADFGIA 603
            G+  +  VA+K ++     +    A  +   F  EV +LS L +PN+++F+AAC    +K   +C+++E++S G+L  +L    HK L     + + L  DIA+G+ Y+H Q +IHRDL   NVL+D              EF  K+ DFG++
Sbjct:  396 GLLNETEVAIKFVK-----KAHCEAITVCDTFYHEVLILSNLRHPNIVQFMAACIKYGEKETNHCIVSEWMSGGNLTQFLMN-NHKVLENNPHLRVKLLTDIAKGILYLHKQHIIHRDLTSNNVLLDFKREILPNQLYGSNEFTAKVCDFGLS 542          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: WAKLA_ARATH (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana GN=WAKL1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.735e-15
Identity = 48/174 (27.59%), Postives = 90/174 (51.72%), Query Frame = 1
Query:   91 GGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLH-KLEHKTLPLPKLIAIALDIARGMEYIHSQG---VIHRDLKPENVLIDQEFHLKIADFG 597
            G V ++ + ++ E         +      G    +Y G+  D   VAVK  ++ D+D+ E        +F  E+ LLS++++ N++K +  C +  V  ++ EY+  G L   LH + +  T+     + IA++IA  + Y+HS     + HRD+K  N+L+D+++  K++DFG
Sbjct:  409 GNVEMSKIFSSKELRKATDNFSIDRVLGQGGQGTVYKGMLVDGSIVAVKRSKVVDEDKME--------EFINEIVLLSQINHRNIVKLLGCCLETEVPILVYEYIPNGDLFKRLHDESDDYTMTWEVRLRIAIEIAGALTYMHSAASFPIFHRDIKTTNILLDEKYRAKVSDFG 574          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: WAK1_ARATH (Wall-associated receptor kinase 1 OS=Arabidopsis thaliana GN=WAK1 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 9.735e-15
Identity = 61/214 (28.50%), Postives = 106/214 (49.53%), Query Frame = 1
Query:   19 LGSLRVTERYKSRKESAWTKYF---DHGGVRVNAVDAADEHTVDLSQLFL--GLRFA-----------HGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLH-KLEHKTLPLPKLIAIALDIARGMEYIHSQG---VIHRDLKPENVLIDQEFHLKIADFG 597
            LG   + +R K  K++   + F   + GG+    +  A    VD+ ++F   G++ A            G    +Y GI  D   VA+K  R+ D  + E        QF  EV +LS++++ NV+K +  C +  V  ++ E+++ G+L  +LH  +   +L     + IA+++A  + Y+HS     +IHRD+K  N+L+D     K+ADFG
Sbjct:  350 LGVACIQQRMKHLKDTKLREQFFEQNGGGMLTQRLSGAGPSNVDV-KIFTEDGMKKATNGYAESRILGQGGQGTVYKGILPDNSIVAIKKARLGDSSQVE--------QFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFITNGTLFDHLHGSMIDSSLTWEHRLKIAIEVAGTLAYLHSSASIPIIHRDIKTANILLDVNLTAKVADFG 554          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: TNI3K_PONAB (Serine/threonine-protein kinase TNNI3K OS=Pongo abelii GN=TNNI3K PE=2 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 9.735e-15
Identity = 50/138 (36.23%), Postives = 82/138 (59.42%), Query Frame = 1
Query:  136 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIH--SQGVIHRDL 540
            + LS++        G+  ++Y G  +++ VA+K  R      N   +      F REV++L +L++P VI+FV AC   P  + ++T+Y+S GSL + LH+ + + L L   + IA+D+ARGMEY+H  +Q +IHRDL
Sbjct:  458 LQLSEIEFHEIIGSGSFGKVYKGRCRNKIVAIKRYRA-----NTYCSKSDVDMFCREVSILCQLNHPCVIQFVGACLNDPSQFAIVTQYISGGSLFSLLHE-QKRILDLQSKLIIAVDVARGMEYLHNLTQPIIHRDL 589          
The following BLAST results are available for this feature:
BLAST of CB250328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLK7_ARATH7.454e-1533.33Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
RIPK2_MOUSE7.454e-1532.92Receptor-interacting serine/threonine-protein kina... [more]
IRAK1_HUMAN7.454e-1532.45Interleukin-1 receptor-associated kinase 1 OS=Homo... [more]
ERBB4_HUMAN7.454e-1531.54Receptor tyrosine-protein kinase erbB-4 OS=Homo sa... [more]
CIPKS_ORYSJ7.454e-1530.06CBL-interacting protein kinase 28 OS=Oryza sativa ... [more]
BLK_MOUSE7.454e-1530.67Tyrosine-protein kinase Blk OS=Mus musculus GN=Blk... [more]
ZAKA_DICDI9.735e-1532.68Dual specificity protein kinase zakA OS=Dictyostel... [more]
WAKLA_ARATH9.735e-1527.59Wall-associated receptor kinase-like 1 OS=Arabidop... [more]
WAK1_ARATH9.735e-1528.50Wall-associated receptor kinase 1 OS=Arabidopsis t... [more]
TNI3K_PONAB9.735e-1536.23Serine/threonine-protein kinase TNNI3K OS=Pongo ab... [more]

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Properties
Property NameValue
Genbank descriptionEST0116 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ168 similar to protein kinase (acc# CAC09580), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250328 ID=CB250328; Name=CB250328; organism=Citrus sinensis; type=EST; length=609bp
ACAAGCCCTCTCAGGCACTTGGGTTCTTTGAGAGTTACCGAGAGATATAA
GAGCAGAAAGGAATCAGCTTGGACCAAGTATTTTGATCATGGCGGAGTTA
GGGTTAATGCTGTGGATGCTGCAGATGAACACACTGTTGACCTCTCTCAG
CTCTTTCTTGGGCTTAGGTTTGCTCACGGGGCACATAGCCGACTTTACCA
TGGGATATATAAGGACGAGCCTGTTGCGGTGAAGATTATCAGGATACCAG
ATGATGACGAAAATGAAACCTTGGCAGCTCGATTAGAGAAACAATTCAAT
CGAGAAGTAGCTCTTTTATCTCGCCTCCACAATCCAAATGTCATAAAGTT
TGTAGCAGCATGTAAAAAGCCACCAGTATATTGTGTCATCACAGAATATC
TATCAGAGGGTTCCTTGAGGGCATACTTGCATAAGCTGGAGCACAAAACC
CTCCCCTTACCGAAACTGATTGCAATTGCTCTCGATATTGCACGTGGAAT
GGAATACATTCACTCTCAAGGTGTCATTCATCGGGATCTTAAGCCAGAAA
ATGTCCTTATTGATCAAGAATTCCACCTGAAAATTGCTGATTTTGGCATA
GCCTGTGAG
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