CB250328

Overview
NameCB250328
Unique NameCB250328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: FER_MOUSE (Proto-oncogene tyrosine-protein kinase Fer OS=Mus musculus GN=Fer PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.040e-16
Identity = 55/173 (31.79%), Postives = 92/173 (53.18%), Query Frame = 1
Query:   91 GGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDE-PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            G V +N +    +  ++   + LG     G    +Y G  KD+ PVA+K  +       E L   L+ +F +E  +L +  +PN++K +  C ++ PVY +I E +  G    +L K + + L L +L+  +LD+A GM Y+ S+  IHRDL   N L+ +   LKI+DFG++
Sbjct:  544 GVVLLNPIPKDKKWVLNHEDVSLGELLGKGNFGEVYKGTLKDKTPVAIKTCK-------EDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVY-IIMELVPGGDFLTFLRKRKDE-LKLKQLVRFSLDVAAGMLYLESKNCIHRDLAARNCLVGENNTLKISDFGMS 707          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: DDR1_MOUSE (Epithelial discoidin domain-containing receptor 1 OS=Mus musculus GN=Ddr1 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.040e-16
Identity = 52/152 (34.21%), Postives = 81/152 (53.29%), Query Frame = 1
Query:  205 IYKDEP--VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYL--HKLEHK---------------TLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            ++K  P  VAVKI+R PD  +N          F +EV ++SRL +PN+I+ +  C +    C+IT+Y+  G L  +L   +LE+K               T+  P L+ +   IA GM Y+ +   +HRDL   N L+ + F +KIADFG++
Sbjct:  642 VHKGHPLLVAVKILR-PDATKNA------RNDFLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSARQLENKATQGLSGDTESDQGPTISYPMLLHVGAQIASGMRYLATLNFVHRDLATRNCLVGENFTIKIADFGMS 786          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: KINY_DICDI (Probable serine/threonine-protein kinase kinY OS=Dictyostelium discoideum GN=kinY PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.774e-16
Identity = 54/172 (31.40%), Postives = 87/172 (50.58%), Query Frame = 1
Query:  136 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVY-------------CVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQE---FHLKIADFGIA 603
            +D+  L +G     GA+  +Y G   +  VA+K I+    ++NE +     K   REVA+L  + +PN+++F+    +P                 ++TEY+  G+L   + K   K  P+   I ++LDIA  M Y+HS+ +I RDLK +N+LID        K+ DFG A
Sbjct:   27 IDIKDLKVGESIGSGAYGIVYRGTLFNSDVAIKKIQNEKSEKNEFI-----KYLKREVAVLKNIQHPNIVQFIGVYYEPLASPSLVNRLLNSSSTWIVTEYIGGGNLHERI-KDTKKDFPIELRIKLSLDIALAMAYLHSRDIIFRDLKSKNILIDDSSSPIRGKVCDFGFA 192          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: JAK_DROME (Tyrosine-protein kinase hopscotch OS=Drosophila melanogaster GN=hop PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.774e-16
Identity = 50/137 (36.50%), Postives = 78/137 (56.93%), Query Frame = 1
Query:  211 KDEP---VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFH---LKIADFGIA 603
            KD+P   VA+K++             ++   F+RE+ ++  L +PN++KF    +K   +C+I EYL  GS   YL +     L  P+L++ ALDIA GM+Y+   G+IHRDL   N+L+D       +KI+DFG+A
Sbjct:  916 KDQPREQVAIKMLN----------TMQVSTDFHREIGIMRTLSHPNIVKFKYWAEKS--HCIIMEYLQSGSFDIYL-RFTAPNLNNPRLVSFALDIANGMKYLSDMGLIHRDLAARNILVDHNGDGDCVKISDFGLA 1039          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: GEFX_DICDI (RasGEF domain-containing serine/threonine-protein kinase X OS=Dictyostelium discoideum GN=gefX PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.774e-16
Identity = 48/148 (32.43%), Postives = 82/148 (55.41%), Query Frame = 1
Query:  166 RFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL--PKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            +   G+   ++ G Y    VA+K I   DD E         K  +REV++L  L +P ++ F   C       ++TE++S G +R  L K    T P+   K ++IA+D+A+ M ++H++ +IHRDLK +N+L+D+   +++ DFG A
Sbjct:   26 KIGKGSFGSVFRGCYLGLDVAIKKIEKADDPE-------YLKYIDREVSMLQSLRHPFIVNFSGICVHSSGLYIVTEFVSGGDVRQLLKK----TPPIGWDKRVSIAVDLAKAMVFLHAKKIIHRDLKSKNILLDEFQRIRLCDFGFA 162          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: FRK_HUMAN (Tyrosine-protein kinase FRK OS=Homo sapiens GN=FRK PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.774e-16
Identity = 52/162 (32.10%), Postives = 85/162 (52.47%), Query Frame = 1
Query:  124 DEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDE-PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACK-KPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            D+  +D + + L  R   G    ++ G++ +  PVAVK ++    D N+         F RE  ++  L +P +I+  A C  + P+Y +ITE +  GSL+ YL       + L + + +A  +A GM Y+ S+  IHRDL   NVL+ +    K+ADFG+A
Sbjct:  225 DQWEIDRNSIQLLKRLGSGQFGEVWEGLWNNTTPVAVKTLKPGSMDPND---------FLREAQIMKNLRHPKLIQLYAVCTLEDPIY-IITELMRHGSLQEYLQNDTGSKIHLTQQVDMAAQVASGMAYLESRNYIHRDLAARNVLVGEHNIYKVADFGLA 376          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: FER_RAT (Proto-oncogene tyrosine-protein kinase Fer (Fragment) OS=Rattus norvegicus GN=Fer PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.774e-16
Identity = 55/173 (31.79%), Postives = 92/173 (53.18%), Query Frame = 1
Query:   91 GGVRVNAVDAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDE-PVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAAC-KKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            G V +N +    +  ++   + LG     G    +Y G  KD+ PVAVK  +       E L   L+ +F +E  +L +  +PN++K +  C ++ PVY +I E +  G   ++L K + + L L +L+  +LD+A GM Y+  +  IHRDL   N L+ +   LKI+DFG++
Sbjct:   44 GVVLLNPIPKDKKWVLNHEDVSLGELLGKGNFGEVYKGTLKDKTPVAVKTCK-------EDLPQELKIKFLQEAKILKQYDHPNIVKLIGVCTQRQPVY-IIMELVPGGDFLSFLRKRKDE-LKLKQLVRFSLDVAAGMLYLEGKNCIHRDLAARNCLVGENNTLKISDFGMS 207          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.774e-16
Identity = 61/202 (30.20%), Postives = 107/202 (52.97%), Query Frame = 1
Query:   49 KSRKESAWTKYFDHGGVRVNAVDAADEHTV------DLSQLFLGLR----FAHGAHSRLYHGIYKD-EPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLH---KLEHKTLPLPKLIAIALDIARGMEYIHSQG---VIHRDLKPENVLIDQEFHLKIADFGIA 603
            +S K+SA+TK  D+G +R +  +             +L +   G +       G+ S +Y G+ +D   VAVK   +  D +  +       +F  E+ LLSRL++ +++  +  C++     ++ E+++ GSL  +LH   K   + L   K + IA+  ARG+EY+H      VIHRD+K  N+LID+E + ++ADFG++
Sbjct:  470 RSSKDSAFTK--DNGKIRPDLDELQKRRRARVFTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNS------NEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLS 663          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: Y0138_DICDI (Probable serine/threonine-protein kinase DDB_G0278509 OS=Dictyostelium discoideum GN=DDB_G0278509 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.317e-16
Identity = 50/159 (31.45%), Postives = 87/159 (54.72%), Query Frame = 1
Query:  136 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLH-NPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYI--HSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            +D  ++        G  S++YHG+++ + VA+K I + +   N++L       F REV +LS+L  + N++ +  ACK      +ITEYL  GSL   LH+ +   L   + ++ A+ +A G  ++  +   + H DLK +N+L+     +KIADFG+A
Sbjct:  941 IDFDEIQFFNLIGQGGFSKVYHGVWRSKDVAIKQIELQN---NKSL-----DDFRREVGILSKLKPHENLLAYYGACKHANYCYIITEYLPRGSLHDLLHREQLMKLDFKQKVSFAICVALGCYHLSTYEPPIYHTDLKTKNLLVTNALKIKIADFGLA 1091          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: STK_HYDAT (Tyrosine-protein kinase STK OS=Hydra attenuata GN=STK PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.317e-16
Identity = 52/164 (31.71%), Postives = 85/164 (51.83%), Query Frame = 1
Query:  118 AADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEP-VAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACK-KPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            A D   +    L L  +   G    ++ G++ +   VAVK ++                 F  E  ++ +L + ++++  A C  + P+Y ++TEY+S GSL  YL K E   L LP LI +A  +A GM ++ +QG IHRDL   N+L+ + +  K+ADFG+A
Sbjct:  229 AKDAWEIPRESLRLNRKLGAGQFGEVWAGVWNNTTQVAVKTLKP---------GTMSPASFLDEAGVMKKLRHKHLVQLYAICSDREPIY-IVTEYMSGGSLLDYLSKGEGVNLQLPTLIDMAAQVASGMAFLEAQGYIHRDLAARNILVGENYICKVADFGLA 382          
The following BLAST results are available for this feature:
BLAST of CB250328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FER_MOUSE1.040e-1631.79Proto-oncogene tyrosine-protein kinase Fer OS=Mus ... [more]
DDR1_MOUSE1.040e-1634.21Epithelial discoidin domain-containing receptor 1 ... [more]
KINY_DICDI1.774e-1631.40Probable serine/threonine-protein kinase kinY OS=D... [more]
JAK_DROME1.774e-1636.50Tyrosine-protein kinase hopscotch OS=Drosophila me... [more]
GEFX_DICDI1.774e-1632.43RasGEF domain-containing serine/threonine-protein ... [more]
FRK_HUMAN1.774e-1632.10Tyrosine-protein kinase FRK OS=Homo sapiens GN=FRK... [more]
FER_RAT1.774e-1631.79Proto-oncogene tyrosine-protein kinase Fer (Fragme... [more]
ACR4_ARATH1.774e-1630.20Serine/threonine-protein kinase-like protein ACR4 ... [more]
Y0138_DICDI2.317e-1631.45Probable serine/threonine-protein kinase DDB_G0278... [more]
STK_HYDAT2.317e-1631.71Tyrosine-protein kinase STK OS=Hydra attenuata GN=... [more]

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Properties
Property NameValue
Genbank descriptionEST0116 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ168 similar to protein kinase (acc# CAC09580), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250328 ID=CB250328; Name=CB250328; organism=Citrus sinensis; type=EST; length=609bp
ACAAGCCCTCTCAGGCACTTGGGTTCTTTGAGAGTTACCGAGAGATATAA
GAGCAGAAAGGAATCAGCTTGGACCAAGTATTTTGATCATGGCGGAGTTA
GGGTTAATGCTGTGGATGCTGCAGATGAACACACTGTTGACCTCTCTCAG
CTCTTTCTTGGGCTTAGGTTTGCTCACGGGGCACATAGCCGACTTTACCA
TGGGATATATAAGGACGAGCCTGTTGCGGTGAAGATTATCAGGATACCAG
ATGATGACGAAAATGAAACCTTGGCAGCTCGATTAGAGAAACAATTCAAT
CGAGAAGTAGCTCTTTTATCTCGCCTCCACAATCCAAATGTCATAAAGTT
TGTAGCAGCATGTAAAAAGCCACCAGTATATTGTGTCATCACAGAATATC
TATCAGAGGGTTCCTTGAGGGCATACTTGCATAAGCTGGAGCACAAAACC
CTCCCCTTACCGAAACTGATTGCAATTGCTCTCGATATTGCACGTGGAAT
GGAATACATTCACTCTCAAGGTGTCATTCATCGGGATCTTAAGCCAGAAA
ATGTCCTTATTGATCAAGAATTCCACCTGAAAATTGCTGATTTTGGCATA
GCCTGTGAG
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