CB250328

Overview
NameCB250328
Unique NameCB250328
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length609
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: RAF1_HUMAN (RAF proto-oncogene serine/threonine-protein kinase OS=Homo sapiens GN=RAF1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 49/156 (31.41%), Postives = 87/156 (55.77%), Query Frame = 1
Query:  136 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            ++ S++ L  R   G+   +Y G +  + VAVKI+++ D    +  A      F  EVA+L +  + N++ F+    K  +  ++T++    SL  +LH  E K   + +LI IA   A+GM+Y+H++ +IHRD+K  N+ + +   +KI DFG+A
Sbjct:  344 IEASEVMLSTRIGSGSFGTVYKGKWHGD-VAVKILKVVDPTPEQFQA------FRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 490          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: RAF1_CHICK (RAF proto-oncogene serine/threonine-protein kinase OS=Gallus gallus GN=RAF1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 49/156 (31.41%), Postives = 87/156 (55.77%), Query Frame = 1
Query:  136 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            ++ S++ L  R   G+   +Y G +  + VAVKI+++ D    +  A      F  EVA+L +  + N++ F+    K  +  ++T++    SL  +LH  E K   + +LI IA   A+GM+Y+H++ +IHRD+K  N+ + +   +KI DFG+A
Sbjct:  344 IEASEVMLSTRIGSGSFGTVYKGKWHGD-VAVKILKVVDPTPEQFQA------FRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 490          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: RAF1_BOVIN (RAF proto-oncogene serine/threonine-protein kinase OS=Bos taurus GN=RAF1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 49/156 (31.41%), Postives = 87/156 (55.77%), Query Frame = 1
Query:  136 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            ++ S++ L  R   G+   +Y G +  + VAVKI+++ D    +  A      F  EVA+L +  + N++ F+    K  +  ++T++    SL  +LH  E K   + +LI IA   A+GM+Y+H++ +IHRD+K  N+ + +   +KI DFG+A
Sbjct:  344 IEASEVMLSTRIGSGSFGTVYKGKWHGD-VAVKILKVVDPTPEQFQA------FRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 490          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: M3K9_HUMAN (Mitogen-activated protein kinase kinase kinase 9 OS=Homo sapiens GN=MAP3K9 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 57/170 (33.53%), Postives = 85/170 (50.00%), Query Frame = 1
Query:  136 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRI-PDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQG---VIHRDLKPENVLIDQEFH--------LKIADFGIACE 609
            +D ++L L      G   ++Y   +  + VAVK  R  PD+D ++T+     +   +E  L + L +PN+I     C K P  C++ E+   G L      L  K +P   L+  A+ IARGM Y+H +    +IHRDLK  N+LI Q+          LKI DFG+A E
Sbjct:  139 IDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTI-----ENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLN---RVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 300          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: IRAK1_MOUSE (Interleukin-1 receptor-associated kinase 1 OS=Mus musculus GN=Irak1 PE=1 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 48/151 (31.79%), Postives = 79/151 (52.32%), Query Frame = 1
Query:  163 LRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPL--PKLIAIALDIARGMEYIH--SQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            LR   G    +Y  + ++   AVK ++    +E +     +++ F  EV  LSR  +PN++ F   C +  +YC++  +L  GSL   LH       PL  P+ + I L  AR ++++H  S  +IH D+K  NVL+D+    K+ DFG+A
Sbjct:  216 LRIGEGGFGCVYRAVMRNTTYAVKRLK----EEADLEWTMVKQSFLTEVEQLSRFRHPNIVDFAGYCAESGLYCLVYGFLPNGSLEDQLHLQTQACSPLSWPQRLDILLGTARAIQFLHQDSPSLIHGDIKSSNVLLDERLMPKLGDFGLA 362          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: CDC7_SCHPO (Cell division control protein 7 OS=Schizosaccharomyces pombe GN=cdc7 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 6.742e-16
Identity = 49/160 (30.63%), Postives = 83/160 (51.88%), Query Frame = 1
Query:  130 HTVDLSQLFLGLRFAHGAHSRLYHG--IYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            H +  S + LG     GA   +Y G  I   E VAVK +++    +++    ++E      + LL  L +PN++K+  + +     C+I EY   GSLR+         +P   +      + +G+ Y+H+QGVIHRD+K  N+L  ++  +K+ADFG+A
Sbjct:    2 HNIQASSITLGDCLGKGAFGAVYRGLNIKNGETVAVKKVKLSKMLKSDLSVIKME------IDLLKNLDHPNIVKYRGSYQTNDSLCIILEYCENGSLRSICKNFGK--IPENLVALYTFQVLQGLLYLHNQGVIHRDIKGANILTTKDGTIKLADFGVA 153          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: Y9853_DICDI (Probable serine/threonine-protein kinase DDB_G0271538 OS=Dictyostelium discoideum GN=DDB_G0271538 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.805e-16
Identity = 48/167 (28.74%), Postives = 83/167 (49.70%), Query Frame = 1
Query:  115 DAADEHTVDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQ----EFHLKIADFGIA 603
            D  D  ++D S LF+ +    G+  ++    Y    VAVK +      + +     L     RE+ +L  + +PN+++++ AC     Y ++TEY+  G L  ++       +     + +ALDIA    Y+HS+ VI RDLK +N+L+D+     +  K+ DFG A
Sbjct:   21 DENDFSSLDYSDLFMDVEIGRGSFGQVQKASYFGTDVAVKQLSTLVSIDPDYFKFML-----REIKILKGMRHPNIVQYIGACCHEGRYMIVTEYIKGGDLHQFIKARGVSNISWTLRMKLALDIASAFSYLHSKKVIFRDLKAKNILVDEIGDGLYRAKVIDFGFA 182          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: Y5169_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g16900 OS=Arabidopsis thaliana GN=At5g16900 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.805e-16
Identity = 51/147 (34.69%), Postives = 82/147 (55.78%), Query Frame = 1
Query:  178 GAHSRLYHGIYKD-EPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLH-KLEHKTLPLPKLIAIALDIARGMEYIHS---QGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            G    +YHG   D E VAVK++  P   +         K+F  EV LL R+H+ N++  V  C +     +I EY++ G L+++L  K     L     ++IA++ A G+EY+HS     ++HRD+K  N+L+D+ F  K+ADFG++
Sbjct:  582 GGFGVVYHGYLNDSEQVAVKVLS-PSSSQGY-------KEFKAEVELLLRVHHINLVSLVGYCDEQAHLALIYEYMANGDLKSHLSGKHGDCVLKWENRLSIAVETALGLEYLHSGCKPLMVHRDVKSMNILLDEHFQAKLADFGLS 720          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: RAF_MSV36 (Serine/threonine-protein kinase-transforming protein raf OS=Murine sarcoma virus 3611 GN=V-RAF PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.805e-16
Identity = 49/156 (31.41%), Postives = 87/156 (55.77%), Query Frame = 1
Query:  136 VDLSQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            ++ S++ L  R   G+   +Y G +  + VAVKI+++ D    +  A      F  EVA+L +  + N++ F+    K  +  ++T++    SL  +LH  E K   + +LI IA   A+GM+Y+H++ +IHRD+K  N+ + +   +KI DFG+A
Sbjct:   19 MEASEVMLSTRIGSGSFGTVYKGKWHGD-VAVKILKVVDPTPEQLQA------FRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 165          
BLAST of CB250328 vs. ExPASy Swiss-Prot
Match: RAF1_XENLA (RAF proto-oncogene serine/threonine-protein kinase OS=Xenopus laevis GN=raf1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 8.805e-16
Identity = 49/153 (32.03%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  145 SQLFLGLRFAHGAHSRLYHGIYKDEPVAVKIIRIPDDDENETLAARLEKQFNREVALLSRLHNPNVIKFVAACKKPPVYCVITEYLSEGSLRAYLHKLEHKTLPLPKLIAIALDIARGMEYIHSQGVIHRDLKPENVLIDQEFHLKIADFGIA 603
            S++ L  R   G+   +Y G +  + VAVKI+++ D    +  A      F  EVA+L +  + N++ F+    K  +  ++T++    SL  +LH L+ K   + +LI IA   A+GM+Y+H++ +IHRD+K  N+ + +   +KI DFG+A
Sbjct:  338 SEVMLSSRIGSGSFGTVYKGKWHGD-VAVKILKVTDPTPEQLQA------FRNEVAVLRKTRHVNILLFMGYMTKDNL-AIVTQWCEGSSLYYHLHVLDTK-FQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLA 481          
The following BLAST results are available for this feature:
BLAST of CB250328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAF1_HUMAN6.742e-1631.41RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_CHICK6.742e-1631.41RAF proto-oncogene serine/threonine-protein kinase... [more]
RAF1_BOVIN6.742e-1631.41RAF proto-oncogene serine/threonine-protein kinase... [more]
M3K9_HUMAN6.742e-1633.53Mitogen-activated protein kinase kinase kinase 9 O... [more]
IRAK1_MOUSE6.742e-1631.79Interleukin-1 receptor-associated kinase 1 OS=Mus ... [more]
CDC7_SCHPO6.742e-1630.63Cell division control protein 7 OS=Schizosaccharom... [more]
Y9853_DICDI8.805e-1628.74Probable serine/threonine-protein kinase DDB_G0271... [more]
Y5169_ARATH8.805e-1634.69Probable LRR receptor-like serine/threonine-protei... [more]
RAF_MSV368.805e-1631.41Serine/threonine-protein kinase-transforming prote... [more]
RAF1_XENLA8.805e-1632.03RAF proto-oncogene serine/threonine-protein kinase... [more]

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Properties
Property NameValue
Genbank descriptionEST0116 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ168 similar to protein kinase (acc# CAC09580), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250328 ID=CB250328; Name=CB250328; organism=Citrus sinensis; type=EST; length=609bp
ACAAGCCCTCTCAGGCACTTGGGTTCTTTGAGAGTTACCGAGAGATATAA
GAGCAGAAAGGAATCAGCTTGGACCAAGTATTTTGATCATGGCGGAGTTA
GGGTTAATGCTGTGGATGCTGCAGATGAACACACTGTTGACCTCTCTCAG
CTCTTTCTTGGGCTTAGGTTTGCTCACGGGGCACATAGCCGACTTTACCA
TGGGATATATAAGGACGAGCCTGTTGCGGTGAAGATTATCAGGATACCAG
ATGATGACGAAAATGAAACCTTGGCAGCTCGATTAGAGAAACAATTCAAT
CGAGAAGTAGCTCTTTTATCTCGCCTCCACAATCCAAATGTCATAAAGTT
TGTAGCAGCATGTAAAAAGCCACCAGTATATTGTGTCATCACAGAATATC
TATCAGAGGGTTCCTTGAGGGCATACTTGCATAAGCTGGAGCACAAAACC
CTCCCCTTACCGAAACTGATTGCAATTGCTCTCGATATTGCACGTGGAAT
GGAATACATTCACTCTCAAGGTGTCATTCATCGGGATCTTAAGCCAGAAA
ATGTCCTTATTGATCAAGAATTCCACCTGAAAATTGCTGATTTTGGCATA
GCCTGTGAG
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