CB250329
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_METBF (Catalase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=kat PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 58/170 (34.12%), Postives = 87/170 (51.18%), Query Frame = 1 Query: 4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHY-DGFMNF-MHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKEN-NFNQPGERYRSWAPD-RQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNV 501 AF PA +VPGI S DK+LQ R+FSY DT HRLGPNY +PVNAPK + N++ DGFM + +Y+P+ + ++ PP G + + N +F Q G YR D +E + V LS + ++R + + +A + G ++A L + Sbjct: 316 AFSPANLVPGIGISPDKMLQGRVFSYHDTHIHRLGPNYNLIPVNAPKYSPENSYQRDGFMRVDANGGSGPNYWPNSFGGPSPDSVYLEPPFGVSGLAARTLYTHPNDDFVQAGNLYRDVMTDYDRENLVGNIVSHLSAAQKRIQLRQTALFF--KADRDYGSRVAKGLEL 483
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAW (Catalase OS=Staphylococcus aureus (strain MW2) GN=katA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1 Query: 4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510 AF P ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK N DG M + ++ Y+P+ ++D + P P + G +R+ +N F QPG+ +R + D +ER +A+ VT +++ I + +A G+ +A L + N Sbjct: 314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAS (Catalase OS=Staphylococcus aureus (strain MSSA476) GN=katA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1 Query: 4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510 AF P ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK N DG M + ++ Y+P+ ++D + P P + G +R+ +N F QPG+ +R + D +ER +A+ VT +++ I + +A G+ +A L + N Sbjct: 314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAR (Catalase OS=Staphylococcus aureus (strain MRSA252) GN=katA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1 Query: 4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510 AF P ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK N DG M + ++ Y+P+ ++D + P P + G +R+ +N F QPG+ +R + D +ER +A+ VT +++ I + +A G+ +A L + N Sbjct: 314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAN (Catalase OS=Staphylococcus aureus (strain N315) GN=katA PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1 Query: 4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510 AF P ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK N DG M + ++ Y+P+ ++D + P P + G +R+ +N F QPG+ +R + D +ER +A+ VT +++ I + +A G+ +A L + N Sbjct: 314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAM (Catalase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=katA PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1 Query: 4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510 AF P ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK N DG M + ++ Y+P+ ++D + P P + G +R+ +N F QPG+ +R + D +ER +A+ VT +++ I + +A G+ +A L + N Sbjct: 314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAC (Catalase OS=Staphylococcus aureus (strain COL) GN=katA PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1 Query: 4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510 AF P ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK N DG M + ++ Y+P+ ++D + P P + G +R+ +N F QPG+ +R + D +ER +A+ VT +++ I + +A G+ +A L + N Sbjct: 314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAB (Catalase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=katA PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1 Query: 4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510 AF P ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK N DG M + ++ Y+P+ ++D + P P + G +R+ +N F QPG+ +R + D +ER +A+ VT +++ I + +A G+ +A L + N Sbjct: 314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAA8 (Catalase OS=Staphylococcus aureus (strain NCTC 8325) GN=katA PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1 Query: 4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510 AF P ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK N DG M + ++ Y+P+ ++D + P P + G +R+ +N F QPG+ +R + D +ER +A+ VT +++ I + +A G+ +A L + N Sbjct: 314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAA3 (Catalase OS=Staphylococcus aureus (strain USA300) GN=katA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 56/181 (30.94%), Postives = 91/181 (50.28%), Query Frame = 1 Query: 4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510 AF P ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK N DG M + ++ Y+P+ ++D + P P + G +R+ +N F QPG+ +R + D +ER +A+ VT +++ I + +A G+ +A L + N Sbjct: 314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488 The following BLAST results are available for this feature:
BLAST of CB250329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250329 ID=CB250329; Name=CB250329; organism=Citrus sinensis; type=EST; length=692bpback to top |