CB250329

Overview
NameCB250329
Unique NameCB250329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Mature fruit abscission zone cDNA subtraction librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_HAEIN (Catalase OS=Haemophilus influenzae GN=katA PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14
Identity = 52/169 (30.77%), Postives = 79/169 (46.75%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYF-PSRYDPVRHAEMHPTPPEICGGRREKCIIPKENN--FNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNV 501
            AF P+ +VPGI  S D++LQ R+F+YAD QR+RLG NY Q+PVN P+C  H+N  DG          + ++ P+ +   +       PP    G         ++N  F+QP   +     ++++        A+ D     + RHI   +W  A    G   A  L V
Sbjct:  321 AFAPSNLVPGIGASPDRMLQARLFNYADAQRYRLGVNYRQIPVNRPRCPVHSNQRDGQGRVDGNYGSLPHYEPNSFSQWQQQPDFAEPPLRINGDAAHWDYRNDDNDYFSQPRALFNLMNAEQKQSLFNNTAAAMGDAPDFIKYRHIRNCHWCDAAYGEGVAKALGLTV 489          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_DROME (Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14
Identity = 41/79 (51.90%), Postives = 54/79 (68.35%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAP-KCAQHNNHYDGFMNFM-HRDEEIDYFPSRYD 231
            +AF PA +VPG+  S DK+L  R+FSY+DT RHRLGPNYLQ+PVN P K    N   DG MN   ++D   +YFP+ ++
Sbjct:  330 IAFSPAHLVPGVEPSPDKMLHGRLFSYSDTHRHRLGPNYLQIPVNCPYKVKIENFQRDGAMNVTDNQDGAPNYFPNSFN 408          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATB_DICDI (Catalase-B OS=Dictyostelium discoideum GN=catB PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.735e-14
Identity = 59/182 (32.42%), Postives = 83/182 (45.60%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRL-GPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYD---------PVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRW---VDALSDPRV-THEIRHIWISYWSQACKSLGQKLASRLNVR 504
            +AFC + VVPGI +SND LLQ RIFSY DTQ  RL GPN+ ++P+N P C   NN  DG            YFP+  D                 P P  I G +        E++F+Q    + S +   +   I  +   +   S P V T  + +I ++  S     L +K+A  L V+
Sbjct:  330 VAFCVSHVVPGIDFSNDPLLQGRIFSYLDTQLSRLGGPNFNEIPINRPVCPFANNQRDGIHRMTINKGGASYFPNSIDKGYPLLKEPSANKGGFRPYPENISGTKSYDRSETFEDHFSQATMFWNSMSQHEKNHIIAAYTFEISKCSRPEVRTRYVNNILVNIDS----VLAEKVAKNLGVK 507          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_VIBF1 (Catalase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=katA PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14
Identity = 55/171 (32.16%), Postives = 83/171 (48.54%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFM----NFMHRDEEIDYFPSRYDPVRHAEMHPTPP-EICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNV 501
            AF PA VVPGI +S DK+LQ R+F+Y D QR+RLG N+  +PVNAP+C  H+ H DG M    NF      + Y P+             P   + G          E+ F+QPG+ +R    ++Q          L+      ++RH+   Y  +A  + G+ +   L++
Sbjct:  311 AFNPANVVPGISFSPDKMLQGRLFAYGDAQRYRLGVNHQHIPVNAPRCPVHSYHRDGAMRVDGNF---GSTLGYEPNNEGQWAEQPDFAEPALNLDGAAAHWDHREDEDYFSQPGDLFRLMTAEQQAILFDNTARNLNGVPKEIQLRHLRHCY--KADPAYGEGIGKLLDI 476          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAWA (Catalase OS=Staphylococcus warneri GN=katA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14
Identity = 57/181 (31.49%), Postives = 89/181 (49.17%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPSR---YDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            AF P  +VPG+ YS DK+LQ R+F Y D QR+RLG N+ Q+PVN PK     N      DG M  +  ++     Y+P+    YD     +  P P +  G    +R+      +N F QPG+ +R  + + +ER      +A+    VT +++   I +  +A    G+ +A  L +  N
Sbjct:  314 AFAPTNIVPGLDYSPDKMLQGRLFPYGDAQRYRLGVNHWQIPVNQPKGVGIENLCPFSRDGQMRILDDNQGGGPHYYPNNQGVYDSQPEFKKPPFPADGDGYEYNQRQ----DDDNYFEQPGKLFRLQSDEAKERIFTNTANAMDG--VTEDVKRRHIRHCYKADPDYGKGVAKALGIDIN 488          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_ASCSU (Catalase OS=Ascaris suum GN=CAT PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14
Identity = 50/138 (36.23%), Postives = 76/138 (55.07%), Query Frame = 1
Query:    1 LAFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAP-KCAQHNNHYDG-FMNFMHRDEEIDYFPSRYD-PVRHAEMHPTPPEICGGRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSD 405
            +AF P+ VVPGI +S DK+LQ R+F+Y DTQ HRLGPNY+QLP+N P +   HN   DG F    ++     Y P+ ++  +   ++  +   +  G  ++     E+NF+QP +    W     E    R VD ++D
Sbjct:  331 IAFAPSHVVPGIEFSPDKMLQGRLFAYPDTQFHRLGPNYVQLPINCPYRSRAHNTQRDGCFALDYNQGGMPTYHPNSFNGAIERTDVKESAWSV-SGDVDRFNGDDEDNFSQPRD---LWLKVMDETERARLVDNIAD 464          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_STAAU (Catalase OS=Staphylococcus aureus GN=katA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14
Identity = 55/181 (30.39%), Postives = 91/181 (50.28%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVRPN 510
            AF P  ++PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M  +  ++     ++P+   ++D     +  P P +  G    +R+      +N F QPG+ +R  + D +ER      +A+    VT +++   I +  +A    G+ +A  L +  N
Sbjct:  314 AFAPTNIIPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHHYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEDAKERIFTNTANAMEG--VTDDVKRRHIRHCYKADPEYGKGVAKALGIDIN 488          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATE_ECOLI (Catalase HPII OS=Escherichia coli (strain K12) GN=katE PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 64/191 (33.51%), Postives = 89/191 (46.60%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRL-GPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYDPVRHAEMHP--TPPEICGGRREKCIIPKENN------------FNQPGERYRSWAPDRQERFICRWVDALSD-------PRVTHEIRHIWISYWSQACKSLGQKLA-SRLNVRP 507
            AF P  +VPG+ ++ND LLQ R+FSY DTQ  RL GPN+ ++P+N P C  HN   DG    MHR   ID  P+ Y+P    +  P  TPP    G  E      E N            ++ P   + S  P  Q   +  +   LS         RV  ++ HI ++      K+LG +L   +LN+ P
Sbjct:  390 AFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDG----MHR-MGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAKNLGIELTDDQLNITP 575          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_RHIME (Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMN 183
            AF P+ +VPGI +S DK+LQ RIFSYAD  R+RLG +Y  +PVN P+C  H+ H DG MN
Sbjct:  312 AFSPSNIVPGIGFSPDKVLQARIFSYADAHRYRLGTHYEHIPVNQPRCPVHHYHRDGQMN 371          
BLAST of CB250329 vs. ExPASy Swiss-Prot
Match: CATA_PSEAE (Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 49/170 (28.82%), Postives = 86/170 (50.59%), Query Frame = 1
Query:    4 AFCPAIVVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNF--MHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKENN-FNQPGERYRSWAPDRQERFICRWVDALSDPRVTHEIRHIWISYWSQACKSLGQKLASRLNVR 504
            AF PA VVPGI +S DK+LQ R+FSY D  R+RLG N+ Q+PVNA +C     H DG M     +  + + Y P+ ++  +       PP    G  +      +++ ++QP   +  +  ++++R      + + D  V  +I+   I  + +   + G+ +A  L ++
Sbjct:  313 AFTPANVVPGIGFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAARCPHQVYHRDGGMRVDGNNAHQRVTYEPNSFNQWQEQPDFSEPPLSLEGAADHWNHRVDDDYYSQPAALFHLFTDEQKQRLFANIAEDIRD--VPEQIQRRQIGLFLKVDPAYGKGVADALGLK 480          
The following BLAST results are available for this feature:
BLAST of CB250329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 121
Match NameE-valueIdentityDescription
CATA_HAEIN1.603e-1430.77Catalase OS=Haemophilus influenzae GN=katA PE=2 SV... [more]
CATA_DROME2.094e-1451.90Catalase OS=Drosophila melanogaster GN=Cat PE=1 SV... [more]
CATB_DICDI2.735e-1432.42Catalase-B OS=Dictyostelium discoideum GN=catB PE=... [more]
CATA_VIBF14.665e-1432.16Catalase OS=Vibrio fischeri (strain ATCC 700601 / ... [more]
CATA_STAWA4.665e-1431.49Catalase OS=Staphylococcus warneri GN=katA PE=3 SV... [more]
CATA_ASCSU4.665e-1436.23Catalase OS=Ascaris suum GN=CAT PE=2 SV=2[more]
CATA_STAAU6.093e-1430.39Catalase OS=Staphylococcus aureus GN=katA PE=3 SV=... [more]
CATE_ECOLI7.958e-1433.51Catalase HPII OS=Escherichia coli (strain K12) GN=... [more]
CATA_RHIME7.958e-1458.33Catalase A OS=Rhizobium meliloti GN=katA PE=3 SV=2[more]
CATA_PSEAE7.958e-1428.82Catalase OS=Pseudomonas aeruginosa GN=katA PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionEST0117 Mature fruit abscission zone cDNA subtraction library Citrus sinensis cDNA clone MFAZ169 similar to catalase (acc# P17598), mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB250329 ID=CB250329; Name=CB250329; organism=Citrus sinensis; type=EST; length=692bp
CTTGCTTTCTGCCCTGCTATTGTGGTTCCTGGCATCTACTATTCAAATGA
TAAGTTGCTCCAGACTCGAATCTTCTCCTATGCTGATACTCAGAGGCACC
GTCTAGGGCCGAACTATCTTCAACTCCCAGTAAATGCACCCAAATGTGCT
CAGCACAACAATCATTATGACGGTTTCATGAATTTCATGCACAGGGATGA
GGAGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCTGAGA
TGCATCCAACTCCTCCTGAAATCTGCGGCGGAAGGCGCGAGAAGTGCATA
ATTCCAAAGGAAAACAACTTCAACCAACCTGGAGAGAGATACCGATCTTG
GGCACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGATGCTTTAT
CTGATCCACGCGTCACCCATGAGATCCGCCACATATGGATCTCATACTGG
TCTCAGGCTTGCAAGTCTCTGGGTCAGAAGTTGGCATCTCGTCTGAATGT
GAGGCCTAACATTTAATGGTGATGCGGAGCTGAGTGATTTAGAAAGAGTT
AGCAAGGAGTAAACACAGAGGACGTCAGCAGTTTAAGGAATGCGAATTCG
TTTTCGGGTGGTGTGTTATTTTGTAATACTAAAAAAAACATGTTGGTCCT
GTAATTCATAAACATGATGTTCCTTAAAATAAATGCTGGTTG
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