CB250338
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H32_CHLRE (Histone H3 type 2 OS=Chlamydomonas reinhardtii GN=ch3-II PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 1.395e-62 Identity = 123/129 (95.35%), Postives = 126/129 (97.67%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQLA+KAARK+ P TGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AVLALQEAAEAYLVGLFEDTNLCAIHA+RVTIMPKDIQLARRIRGERA Sbjct: 8 ARKSTGGKAPRKQLATKAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H33_PONAB (Histone H3.3 OS=Pongo abelii PE=2 SV=3) HSP 1 Score: 237.654 bits (605), Expect = 1.821e-62 Identity = 120/129 (93.02%), Postives = 126/129 (97.67%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQLA+KAARKSAP+TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRL REIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCAIHA+RVTIMPKDIQLARRIRGERA Sbjct: 8 ARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLAREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H3_STRPU (Histone H3, embryonic OS=Strongylocentrotus purpuratus PE=2 SV=2) HSP 1 Score: 237.269 bits (604), Expect = 2.379e-62 Identity = 120/129 (93.02%), Postives = 126/129 (97.67%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQLA+KAARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKT+LRFQS AV+ALQEA+EAYLV LFEDTNLCAIHA+RVTIMPKDIQLARRIRGERA Sbjct: 8 ARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTELRFQSSAVMALQEASEAYLVRLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H32_LILLO (Histone H3.2 OS=Lilium longiflorum GN=YAH3 PE=1 SV=3) HSP 1 Score: 237.269 bits (604), Expect = 2.379e-62 Identity = 120/129 (93.02%), Postives = 125/129 (96.90%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQLA+KAARKSAP TGGVKKPHR+RPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK DLRFQS AV ALQEA+E+YLVGLFEDTNLCAIHA+RVTIMPKDIQLARRIRGERA Sbjct: 8 ARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKADLRFQSSAVAALQEASESYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H3_CAEEL (Histone H3 OS=Caenorhabditis elegans GN=his-2 PE=1 SV=4) HSP 1 Score: 236.884 bits (603), Expect = 3.107e-62 Identity = 119/129 (92.25%), Postives = 125/129 (96.90%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQLA+KAARKSAP +GGVKKPHRYRPGTVALREIR+YQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS AV+ALQEA EAYLVGLFEDTNLCAIHA+RVTIMPKDIQLARRIRGERA Sbjct: 8 ARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREIRRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H31_CHLRE (Histone H3 type 1 OS=Chlamydomonas reinhardtii GN=ch3-I PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 3.107e-62 Identity = 122/129 (94.57%), Postives = 126/129 (97.67%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQLA+KAARK+ P TGGVKKPHRYRPGTVALREIRKYQKSTEL+IRKLPFQRLVREIAQDFKTDLRFQS AVLALQEAAEAYLVGLFEDTNLCAIHA+RVTIMPKDIQLARRIRGERA Sbjct: 8 ARKSTGGKAPRKQLATKAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTELVIRKLPFQRLVREIAQDFKTDLRFQSQAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 135
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H31T_HUMAN (Histone H3.1t OS=Homo sapiens GN=HIST3H3 PE=1 SV=3) HSP 1 Score: 236.113 bits (601), Expect = 5.300e-62 Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQLA+K ARKSAP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRL+REIAQDFKTDLRFQS AV+ALQEA E+YLVGLFEDTNLC IHA+RVTIMPKDIQLARRIRGERA Sbjct: 8 ARKSTGGKAPRKQLATKVARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLMREIAQDFKTDLRFQSSAVMALQEACESYLVGLFEDTNLCVIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H3_GRIJA (Histone H3 OS=Griffithsia japonica PE=2 SV=3) HSP 1 Score: 234.958 bits (598), Expect = 1.181e-61 Identity = 117/128 (91.41%), Postives = 126/128 (98.44%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGER 386 ARKSTGGKAPRKQLA+KAARKSAP +GGVKKPHR+RPGTVALREIR++QKSTELL+RKLPFQRLVREIAQDFK+DLRFQS AVLALQEAAEAY+VGLFEDTNLCAIHA+RVTIMPKDIQLARRIRGER Sbjct: 8 ARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRFRPGTVALREIRRFQKSTELLVRKLPFQRLVREIAQDFKSDLRFQSSAVLALQEAAEAYMVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 135
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H3L_XENLA (Histone H3-like OS=Xenopus laevis PE=1 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 4.486e-61 Identity = 117/129 (90.70%), Postives = 123/129 (95.35%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQL +KAA+K AP TGGVKKPHRYRPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQ AV+ALQEA+EAYLV LFEDTNLCAIHA+RVTIMPKDIQLARRIRGERA Sbjct: 8 ARKSTGGKAPRKQLVTKAAKKCAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQRSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
BLAST of CB250338 vs. ExPASy Swiss-Prot
Match: H33_CHLRE (Histone H3 type 3 OS=Chlamydomonas reinhardtii GN=ch3-IV PE=1 SV=2) HSP 1 Score: 233.032 bits (593), Expect = 4.486e-61 Identity = 121/129 (93.80%), Postives = 125/129 (96.90%), Query Frame = 3 Query: 3 ARKSTGGKAPRKQLASKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHARRVTIMPKDIQLARRIRGERA 389 ARKSTGGKAPRKQLA+KAARK+ P TGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS AV+ALQEAAEAYLVGLFEDTNLCAI A+RVTIMPKDIQLARRIRGERA Sbjct: 8 ARKSTGGKAPRKQLATKAARKT-PATGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSQAVVALQEAAEAYLVGLFEDTNLCAITAKRVTIMPKDIQLARRIRGERA 135 The following BLAST results are available for this feature:
BLAST of CB250338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CB250338 ID=CB250338; Name=CB250338; organism=Citrus sinensis; type=EST; length=457bpback to top |