CB290196

Overview
NameCB290196
Unique NameCB290196
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_USTMA (AdoMet-dependent rRNA methyltransferase SPB1 OS=Ustilago maydis GN=SPB1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.036e-16
Identity = 56/169 (33.14%), Postives = 94/169 (55.62%), Query Frame = -3
Query:  319 AEILACAKKMLRKK-QREQILDDVYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYV--VAKKGV------QVRAGKGKV-LVDPRMKKDSR 792
            AE +A A+ ++ ++  +E ++D  ++++ F D DGLP WFL++E++H +A  P+TKE I A++ + + +D                    +LEK +KKA  I++  DIS++ K   I +L   +V    KK+ V  V  KGV      + +  KG+  +VDPRMKK+ R
Sbjct:  723 AEAVALAQALVNRQITKEDLMDQGFSKHNFVDKDGLPTWFLDDEQKHYKANIPITKEAIQALRERQRALDARPIKKVAEAKARKKMRTLRRLEKAQKKAETINENEDISEKEKSNTINKLLAKSVKGAQKKKEVQLVVAKGVNRGLKGRPKGTKGRYKMVDPRMKKELR 891          
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_ASHGO (AdoMet-dependent rRNA methyltransferase SPB1 OS=Ashbya gossypii GN=SPB1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.036e-16
Identity = 61/180 (33.89%), Postives = 96/180 (53.33%), Query Frame = -3
Query:  319 ESEDEEVD-TKAEILACAKKM-LRKKQREQILDDVYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPK---RPKKEYVVAK---KGVQVRAG--KGKV-LVDPRMKKDSR 822
            E    EVD    E +  A ++ L ++ +  I+D+ +NRY F D D LP+WFLE+E+ H +  +P+TKE   A+K + K ++                    +LEK++KKA +I+D +D S++ K ++I +L K    K   +PK   VVAK   +G+  R    KGK  +VD  MK + R
Sbjct:  636 EKHAREVDIATVEAMTLAHQLALGQRSKHDIVDEGFNRYSFRDRDNLPEWFLEDEKMHSKINKPITKEAAMAIKEKLKALNARPIKKVAEAKARKKMRALNRLEKLKKKAGLINDDSDKSEKDKAEEIAKLMKKVTKKAKLKPKVTLVVAKGKNRGLSGRPKGIKGKYKMVDGVMKNEQR 815          
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_YEAST (AdoMet-dependent rRNA methyltransferase SPB1 OS=Saccharomyces cerevisiae GN=SPB1 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.768e-16
Identity = 55/177 (31.07%), Postives = 94/177 (53.11%), Query Frame = -3
Query:  319 SEDEEVDTKAEILACAKKMLRKKQREQILDDVYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPK---RPKKEYVVA---KKGV--QVRAGKGKV-LVDPRMKKDSR 819
            S D ++ T   +    +  L +K +  ++D+ +NRY F D + LPDWFLE+E+ H +  +P+TKE   A+K + K ++                    +LEK++KKA +I+D +D +++ K ++I +L +    K   +PK   VVA    KG+  + +  KGK  +VD  MK + R
Sbjct:  652 SRDIDIATVEAMTLAHQLALGQKNKHDLVDEGFNRYTFRDTENLPDWFLEDEKEHSKINKPITKEAAMAIKEKIKAMNARPIKKVAEAKARKRMRAVARLEKIKKKAGLINDDSDKTEKDKAEEISRLMRKVTKKPKTKPKVTLVVASGRNKGLAGRPKGVKGKYKMVDGVMKNEQR 828          
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_MAGGR (AdoMet-dependent rRNA methyltransferase SPB1 OS=Magnaporthe grisea GN=SPB1 PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.773e-16
Identity = 51/168 (30.36%), Postives = 97/168 (57.74%), Query Frame = -3
Query:  319 AEILACAKKMLR-KKQREQILDDVYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKK--EYVVAK---KGVQVRAG--KGKV-LVDPRMKKDSR 792
            AE +  A ++   +K    ++DD +N++ F D +GLP+WFL++E +H +  +P+TK   AA+K + +  +                    +LEK++KK++++ ++  ++++ K + I +L + A  K+PK+  + VVAK   +G++ R    KG+  +VDPRMKK+ R
Sbjct:  704 AEAMTLAHQLATGQKSSHDVIDDGFNKHAFKDREGLPEWFLDDETKHDKPQKPITKAAAAAIKEKMRAFNARPIKKVREAKGRKKMKAAQRLEKLKKKSDLLVNEEGMTEKEKAESIAKLLRKATKKKPKQAVKVVVAKGANRGIKGRPQGIKGRYKIVDPRMKKEMR 871          
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_CANAL (AdoMet-dependent rRNA methyltransferase SPB1 OS=Candida albicans GN=SPB1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.496e-15
Identity = 57/192 (29.69%), Postives = 98/192 (51.04%), Query Frame = -3
Query:  319 SEDEEVDTKAEILACAKKM---------------LRKKQREQILDDVYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPK---RPKKEYVVAKKGVQVRAG-----KGKV-LVDPRMKKDSR 819
            S+D+EV T  +     +K+               L +K +  ++D+  NRY F D D LPDWF+++E++H + I+P+TKE   A+K + K+++                    +LEK++KK+++I++ +  S+R K  +I +L K    K   +PK   VVA+   +  +G     KGK  +VD  MK + R
Sbjct:  643 SDDDEVSTTTKSTTHQQKVDLATVEAMTLAHQVALGQKNKYDLIDEGINRYSFRDKDNLPDWFIDDEKKHSKLIKPITKEAAIAIKEKQKQLNARPIKKVLEAQSRKKLRALKRLEKIKKKSDLINEDSGKSERDKADEISKLMKKLNKKQKQKPKTTVVVARGSNRGLSGRPKGVKGKYKMVDGVMKNEQR 834          
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_KLULA (AdoMet-dependent rRNA methyltransferase SPB1 OS=Kluyveromyces lactis GN=SPB1 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.427e-15
Identity = 53/177 (29.94%), Postives = 94/177 (53.11%), Query Frame = -3
Query:  319 SEDEEVDTKAEILACAKKMLRKKQREQILDDVYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPK---RPKKEYVVA---KKGVQVR--AGKGKV-LVDPRMKKDSR 819
            S+D ++ T   +    +  L  K +  ++++ +NRY F D + LP+WF+EEE++H +  +P+TKE   A+K + K ++                    +LEK++KKA +I+D +D S++ K ++I +L +    K   +PK   VVA    +G+  R    KGK  +VD  +K + R
Sbjct:  645 SKDIDIATVEAMTLAHQLALGHKTKHDLIEEGFNRYSFRDMENLPEWFVEEEKQHSKINKPITKEAAMAIKDKLKALNARPIKKVAEAKARKKHRAVARLEKLKKKAGLINDDSDKSEKDKAEEIAKLMRKVTKKAKQKPKVTVVVASGKNRGLSGRPKGVKGKYKMVDGVLKNEQR 821          
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_NEUCR (AdoMet-dependent rRNA methyltransferase spb-1 OS=Neurospora crassa GN=spb-1 PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 8.211e-14
Identity = 52/168 (30.95%), Postives = 86/168 (51.19%), Query Frame = -3
Query:  319 AEILACAKKMLR-KKQREQILDDVYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPKRPKKEYVVAK-----KGVQVR--AGKGKV-LVDPRMKKDSR 792
            AE +  A ++   +K    ++DD Y ++ F D DGLPDWFL++E +H +  +P+TK    A+K + +  +                    +LEK++KKA++++    +S++ K   I +L  S   K  +    V K     KG+Q R    KG+  +VDPRMKK+ R
Sbjct:  655 AEAMTLAHQLATGEKTSYDVIDDGYTKHAFKDRDGLPDWFLDDESKHDKPHKPITKAAAQAIKEKLRAYNARPIKKVAEAKARKKFKQAQRLEKLKKKADMLAGDDGMSEKEKAASISKLMASVAKKTRRAPIKVVKAAGSNKGLQGRPKGVKGRYKMVDPRMKKELR 822          
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_YARLI (AdoMet-dependent rRNA methyltransferase SPB1 OS=Yarrowia lipolytica GN=SPB1 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.072e-13
Identity = 50/155 (32.26%), Postives = 81/155 (52.26%), Query Frame = -3
Query:  319 REQILDDVYNRYMFDD-DGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLY-KSAVPKRPKKEYVVA------KKGVQVR----AGKGKVLVDPRMKKDSR 747
            + ++ DD YNRY F D DGLP WF ++E +H +  +P+TKE + A+K + K ++                    +LE+++KK+ +I++    S++ K   I +L  K A P++ KK+ V         KG+  R     GK K +VD  MKK+ R
Sbjct:  685 KHKLQDDGYNRYSFRDLDGLPQWFQDDENKHNKLNKPITKEAVEALKQKMKTLNARPIKKVLEAKGRKKMRALRRLEQMKKKSELINEDGARSEKEKADDISKLMRKLAKPQKSKKKTVTVVYAGGKNKGIAGRPRGVTGKYK-MVDGTMKKEQR 838          
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_DEBHA (AdoMet-dependent rRNA methyltransferase SPB1 OS=Debaryomyces hansenii GN=SPB1 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12
Identity = 46/158 (29.11%), Postives = 87/158 (55.06%), Query Frame = -3
Query:  319 LRKKQREQILDDVYNRYMF-DDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAVPK---RPKKEYVVAKKGVQVRAG-----KGKV-LVDPRMKKDSR 762
            L  K +  ++++  ++Y F D D LP+WF+++E+R+ + ++P+TKE   A+K + K+++                    +LEK++KK+++I++ +  S+R K  +I++L K    K   +PK   VVA+   +  +G     KGK  +VD  MK + R
Sbjct:  663 LGHKNKHDLVNEGIHKYSFRDHDDLPEWFVDDEKRNSKIVKPITKEAALAIKEKQKQLNARPIKKVLEAQGRKKLRALKRLEKLKKKSDMINEDSAKSERDKADEIQKLMKKLTKKQKTKPKATLVVARGSNRGLSGRPKGVKGKYKMVDGVMKNEQR 820          
BLAST of CB290196 vs. ExPASy Swiss-Prot
Match: SPB1_CRYNE (AdoMet-dependent rRNA methyltransferase SPB1 OS=Cryptococcus neoformans GN=SPB1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.685e-12
Identity = 51/169 (30.18%), Postives = 90/169 (53.25%), Query Frame = -3
Query:  319 AEILACAKKML-RKKQREQILDDVYNRYM-FDDDGLPDWFLEEERRHRQAIRPVTKEEIAAMKAQFKEIDXXXXXXXXXXXXXXXXXXXXKLEKVRKKANVISDQADISDRSKRKQIEQLYKSAV---PKRPKKEYVVAK---KGVQVR--AGKGKV-LVDPRMKKDSR 792
            AE ++ A  ++ RK   ++++D  +NR    + DGLP WFL++E +  +   P+TKE + A++A+ + +D                    ++EK +KKA+ + +  ++ D  K +Q+ ++   A     K  +K+ VVAK   KGV+ R    KGK  +VD RM+K+ R
Sbjct:  727 AEAVSLATALVNRKTTADKLIDQGFNRLSAHNKDGLPTWFLDDESQFYKPNIPITKEAVDALRARQRALDARPIKKVAEAKGRKKMKAVARMEKAKKKADGVMESEEMGDGEKARQVRRMLARAAKGKEKAKEKKIVVAKGVNKGVKGRPTGVKGKYKIVDARMRKEVR 895          
The following BLAST results are available for this feature:
BLAST of CB290196 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
SPB1_USTMA1.036e-1633.14AdoMet-dependent rRNA methyltransferase SPB1 OS=Us... [more]
SPB1_ASHGO1.036e-1633.89AdoMet-dependent rRNA methyltransferase SPB1 OS=As... [more]
SPB1_YEAST1.768e-1631.07AdoMet-dependent rRNA methyltransferase SPB1 OS=Sa... [more]
SPB1_MAGGR8.773e-1630.36AdoMet-dependent rRNA methyltransferase SPB1 OS=Ma... [more]
SPB1_CANAL1.496e-1529.69AdoMet-dependent rRNA methyltransferase SPB1 OS=Ca... [more]
SPB1_KLULA7.427e-1529.94AdoMet-dependent rRNA methyltransferase SPB1 OS=Kl... [more]
SPB1_NEUCR8.211e-1430.95AdoMet-dependent rRNA methyltransferase spb-1 OS=N... [more]
SPB1_YARLI1.072e-1332.26AdoMet-dependent rRNA methyltransferase SPB1 OS=Ya... [more]
SPB1_DEBHA1.186e-1229.11AdoMet-dependent rRNA methyltransferase SPB1 OS=De... [more]
SPB1_CRYNE7.685e-1230.18AdoMet-dependent rRNA methyltransferase SPB1 OS=Cr... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa04_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290196 ID=CB290196; Name=CB290196; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTTTTTTTTGAGCCTGCAACAATTAACTCGTGATTCATTACACTT
TTTCTTTAAGTTGATGCGGTACATTATAACGGTCGTGCACAAATGAAACA
AAAGAAACCAAAAATGAAGTAACATTGACAAAGGAATTAAAAAAATGACC
AAAATCTTTTTGAACTTTGCCAGTTCAGCCATGCATGCCCATCTCTGTTC
ACTTGTTTCCTTTCTTTCCTTTCTTTGACGAAGCCTTCACAGATCCTTTA
CCTTTGCGCGCCTTGCCAATATTCCCCTTCTTCGAACCACCTTTTCTGGC
CTTGCCAGATCCATGTGTCCTTGAATCCTTTTTCATTCGTGGATCAACAA
GAACCTTCCCCTTTCCAGCCCTCACTTGAACTCCCTTCTTCGCAACCACA
TATTCCTTTTTAGGCCTTTTGGGTACAGCTGACTTGTATAATTGTTCAAT
TTGCTTCCTCTTTGAGCGATCAGAGATGTCTGCTTGGTCTGATATGACAT
TCGCCTTCTTGCGAACCTTCTCAAGCTTTCGCATGGCAACCCGCTTCTTT
CGGGCTTTGGCCTCAGCCACCTTCTTAGCAGGTCGGGCATCAATTTCTTT
GAATTGTGCTTTCATTGCAGCAATCTCCTCCTTGGTAACAGGCCTAATTG
CTTGCCGATGCCTCCTTTCCTCTTCTAAAAACCAGTCTGGCAAGCCATCA
TCATCAAACATGTACCTATTGTAAACATCATCCAGAATCTGCTCCCTTTG
CTTTTTCCTTAGCATCTTCTTTGCACAAGCCAATATCTCAGCTTTTGTAT
CAACCTCTTCATCTTCTGATTCAT
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