CB290197
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: RRMJ3_MOUSE (Putative rRNA methyltransferase 3 OS=Mus musculus GN=Ftsj3 PE=1 SV=1) HSP 1 Score: 213.772 bits (543), Expect = 9.045e-55 Identity = 110/262 (41.98%), Postives = 170/262 (64.89%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 795 FL+ + A+LDLCAAPGGW+QVA + +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+PNVG +W +A SQ L + +++LA FLA G F+TKVFRS+DY +L+ +QLF +V+ KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K +GY +GD TL + TDF+ + NP++ L + I+ D + H TTE+++ C Sbjct: 41 FLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFHRVQATKPQASRHESAEIFVVCQGFLAPDKVDAKFFDPKFAFKEVEVQAKTVTELV--TKKKPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEISIDD---EELAQHPATTEDIRVCC 294
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: RRMJ3_PONAB (Putative rRNA methyltransferase 3 OS=Pongo abelii GN=FTSJ3 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.181e-54 Identity = 110/262 (41.98%), Postives = 170/262 (64.89%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 795 FL+ + A+LDLCAAPGGW+QVA + +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+PNVG +W +A SQ L + +++LA FLA G+F+TKVFRS+DY +L+ +QLF +V+ KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K +GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C Sbjct: 41 FLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCC 294
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: RRMJ3_HUMAN (Putative rRNA methyltransferase 3 OS=Homo sapiens GN=FTSJ3 PE=1 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.181e-54 Identity = 110/262 (41.98%), Postives = 170/262 (64.89%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLF-QGSVEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 795 FL+ + A+LDLCAAPGGW+QVA + +PV SL++G+DLVPI P+ V+L++DIT CR ++K ++ V D+VL+DG+PNVG +W +A SQ L + +++LA FLA G+F+TKVFRS+DY +L+ +QLF +V+ KP ASR SAEI+++ + AP K+D + D K+ F + V+ + V +++ TK+K +GY +GD TL + TDF+ + NP++ L + I D + H TTE+++ C Sbjct: 41 FLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKV---DVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELV--TKKKPKAEGYAEGDLTLYHRTSVTDFLRAANPVDFLSKASEIMVDD---EELAQHPATTEDIRVCC 294
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_USTMA (AdoMet-dependent rRNA methyltransferase SPB1 OS=Ustilago maydis GN=SPB1 PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 2.015e-54 Identity = 113/284 (39.79%), Postives = 177/284 (62.32%), Query Frame = 1 Query: 10 SFLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD---------VLRGT-------------KQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDPACSAIKDHELTTEEVKALC 795 +FL + +DLCAAPGGW+QVA + +P SL++G+DLVPI PI ++ +DI +CR ++++++++ D+V+HDG+PNVG AW Q+A +Q+ L + S++LA +FL GTFVTKVFRS+DY+++L+ QLF+KVE KP++SR+ SAEI+++ YK PA+IDP+ LD +++F+ ++P + D L+GT K +R+R+GY DGD TL A DFI + + +LGS I+F + T +E++ C Sbjct: 42 NFLEKARCCIDLCAAPGGWLQVASKFMPANSLIVGVDLVPIKPIPRTITFAEDINSYKCRDQLRQILKDWKA---DIVIHDGAPNVGTAWVQDAYAQSELTLQSLRLAVEFLTAGGTFVTKVFRSKDYNNLLWVFNQLFKKVEATKPSSSRNVSAEIFVVCQGYKNPARIDPKFLDPRHVFK-ELDPASLADQDQEAGVPLSLKGTSAGNAHANVFEPKKIRRNREGYADGDYTLFHSLDAMDFIKGQDVIGMLGSYNQISFESDESKKLLSLPDTNDEMRENC 321
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_YEAST (AdoMet-dependent rRNA methyltransferase SPB1 OS=Saccharomyces cerevisiae GN=SPB1 PE=1 SV=2) HSP 1 Score: 211.46 bits (537), Expect = 4.489e-54 Identity = 107/263 (40.68%), Postives = 168/263 (63.88%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVEPRKVVD--VLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTTEEVKA 789 FL S V+DLCAAPG W QVA + PV SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VLHDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLFEKVE KP ASR+ SAEI+++ +KAP ++DPRLLD K +F+ + ++ ++ + K+ R R GYE+GD L + DF+ + +P+ +LG + T D +K + TT+E ++ Sbjct: 43 FLEKSKVVIDLCAAPGSWCQVASKLCPVNSLIIGVDIVPMKPMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLVVNGTFVTKIFRSKDYNKLIWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKRLDPRLLDPKEVFEELPDGQQNMESKIYNPEKKVRKRQGYEEGDNLLYHETSILDFVRTEDPISMLGEMNKFTIDENDHEWKILKKLKQTTDEFRS 302
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_ASHGO (AdoMet-dependent rRNA methyltransferase SPB1 OS=Ashbya gossypii GN=SPB1 PE=3 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 1.000e-53 Identity = 112/263 (42.59%), Postives = 165/263 (62.74%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKV-VDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF--GDPACSAIKDHELTTEEVKA 789 FL S V+DLCAAPG W QVA PV SL++G+D+VP+ P+ ++ + DIT +CR++++ M+ D VLHDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLF+KVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + P+ + V K+ R RDGYE+GD L DF+ +P+++LG+ T D +K + TT E KA Sbjct: 43 FLEKSKVVIDLCAAPGSWCQVASNLCPVNSLIIGVDIVPMQPMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVLHDGAPNVGLNWVQDAFTQSHLTLQALKLAVENLVVGGTFVTKIFRSKDYNKLMWVFQQLFDKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELPDGPQNMQAKVYNPEKKTRKRDGYEEGDYLLYHTVPIMDFVKVEDPIQMLGTTNKFTLDKDDHEWKIVKKLKQTTPEFKA 302
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_CANAL (AdoMet-dependent rRNA methyltransferase SPB1 OS=Candida albicans GN=SPB1 PE=3 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 6.482e-53 Identity = 110/250 (44.00%), Postives = 160/250 (64.00%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ---GSVEPR-----KVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITFGDP 738 FL S V+DLCAAPG W QVA Q P+ SL++G+D+VPI P+ ++ + DIT +CR+R++ M+ D VLHDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+++++ +QLFEKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ G E + K+ + + + Q R R GY++GD TL DFI ++P+ LGS+ P Sbjct: 43 FLEKSKVVIDLCAAPGSWCQVASQLCPINSLIIGVDIVPIKPLPNVITFQSDITTEDCRSRLRGHMKTWKA---DTVLHDGAPNVGLGWVQDAFTQSQLTLQALKLAVENLTAGGTFVTKIFRSRDYNNLMWVFQQLFEKVEATKPPASRNVSAEIFVVCKGFKAPKKLDPRLLDPKEVFEELGGGNESKQNNEAKIFNPEKFSSQ-RQRQGYQEGDYTLFHTMPIMDFIKQDDPINQLGSLNKFDLPAP 288
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_CRYNE (AdoMet-dependent rRNA methyltransferase SPB1 OS=Cryptococcus neoformans GN=SPB1 PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.886e-52 Identity = 114/271 (42.07%), Postives = 163/271 (60.15%), Query Frame = 1 Query: 16 LRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQG--------------SVEPRKV-------------------VDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSITF 729 L + +DLCAAPGGW+QVA + +P GSL++G+DL I P+ + DIT P CR +++ M H +A DLVLHDG+PNVG AW Q+A +QN LV+ S+KLAT+FLA G+FVTKVFRSQDY+S+L+ QLF+ VE KP +SR+ SAEI+++ + AP IDP+ LD K++F+ S+ P +V K++RHR+GY +GD TL + A +F+ +P+ +LG++ I F Sbjct: 43 LSKARCCIDLCAAPGGWLQVAEKYMPKGSLIIGVDLNAIKPLPHVTTFVADITTPHCRQTLRQHM--HDWKA-DLVLHDGAPNVGSAWVQDAFTQNELVLQSLKLATEFLAKGGSFVTKVFRSQDYNSLLWVFGQLFKSVEATKPPSSRNVSAEIFVVCRDFIAPKHIDPKFLDPKHVFKDIASLPTSITEPTDTSIAPTSSSTASAAAAAARLAANSHAHSNVYAPEKKRRHREGYAEGDYTLHHTASAEEFVRGQDPVLLLGNMNKIEF 310
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_KLULA (AdoMet-dependent rRNA methyltransferase SPB1 OS=Kluyveromyces lactis GN=SPB1 PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 9.360e-52 Identity = 111/263 (42.21%), Postives = 165/263 (62.74%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQGSVE-PRKV-VDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTS--ITFGDPACSAIKDHELTTEEVKA 789 FL S V+DLCAAPG W QVA PV SL++G+D+VP+ + ++ + DIT +CR++++ M+ D VLHDG+PNVG +WAQ+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+ +++ +QLFEKVE KP ASR+ SAEI+++ +KAP K+DPRLLD K +F+ + P+ + V K+ R R GYE+GD L + DF+ S +P+ +LG + D +K + TT+E A Sbjct: 44 FLEKSKVVIDLCAAPGSWCQVASNLCPVNSLIIGVDIVPMKTMPNVITFQSDITTEDCRSKLRGYMKTWKA---DTVLHDGAPNVGLSWAQDAFTQSHLTLQALKLAVENLVVGGTFVTKIFRSKDYNKLIWVFQQLFEKVEATKPPASRNVSAEIFVVCKNFKAPKKLDPRLLDPKEVFEELPDGPQNMEAKVFNPEKKVRKRGGYEEGDYLLYHETGLMDFMKSEDPITMLGEYNKFIVDEEDHDWKIVKKLKQTTKEFLA 303
BLAST of CB290197 vs. ExPASy Swiss-Prot
Match: SPB1_DEBHA (AdoMet-dependent rRNA methyltransferase SPB1 OS=Debaryomyces hansenii GN=SPB1 PE=3 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 2.085e-51 Identity = 107/262 (40.84%), Postives = 163/262 (62.21%), Query Frame = 1 Query: 13 FLRSSHAVLDLCAAPGGWMQVAVQRVPVGSLVLGLDLVPIAPIRGAVSLEQDITKPECRARVKKVMEEHGVRAFDLVLHDGSPNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVEVDKPAASRSASAEIYLLGIKYKAPAKIDPRLLDVKYLFQ--GSVEPRKVVDVLRGTKQKRHRDGYEDGDTTLRKVSLATDFIWSNNPLEILGSVTSIT---FGDPACSAIKDHELTTEEV 783 FL S V+DLCAAPG W QVA Q P+ SL++G+D+VPI + ++ + DIT +CR++++ M+ D VLHDG+PNVG W Q+A +Q+ L + ++KLA + L GTFVTK+FRS+DY+++++ +QLFEKVE KP ASR+ SAEI+++ YK+P K+DPRLLD + +F+ + + K+ R R GYE+GD TL +FI + +P+ LG++ ++ D +K +L T E+ Sbjct: 43 FLEKSKVVIDLCAAPGSWCQVASQLCPINSLIIGVDIVPIKALPNCITFQSDITTEDCRSQLRGHMKTWKA---DTVLHDGAPNVGLGWVQDAFTQSHLTLQALKLAVENLNTGGTFVTKIFRSRDYNNLMWVFQQLFEKVEATKPPASRNVSAEIFVVCKGYKSPKKMDPRLLDPREVFEELPTGPDNNEAKIFNPEKKVRRRQGYEEGDYTLFHEMPLLEFIKNEDPINTLGTLNKLSEPPQDDHEWKILKKSKLCTPEL 301 The following BLAST results are available for this feature:
BLAST of CB290197 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 404
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CB290197 ID=CB290197; Name=CB290197; organism=Citrus sinensis; type=EST; length=797bpback to top |