CB290209

Overview
NameCB290209
Unique NameCB290209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4989 contig Csv1_Contig4989:40..848. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_STAAS (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MSSA476) GN=ilvE PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.493e-28
Identity = 69/181 (38.12%), Postives = 98/181 (54.14%), Query Frame = -2
Query:  266 EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNW 790
            E + P  + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++            ++       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY V T +Q G + DK  W
Sbjct:  171 ETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGW 351          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_STAAR (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain MRSA252) GN=ilvE PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.493e-28
Identity = 69/181 (38.12%), Postives = 98/181 (54.14%), Query Frame = -2
Query:  266 EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNW 790
            E + P  + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++            ++       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY V T +Q G + DK  W
Sbjct:  171 ETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGW 351          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_STAAN (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain N315) GN=ilvE PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.493e-28
Identity = 69/181 (38.12%), Postives = 98/181 (54.14%), Query Frame = -2
Query:  266 EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNW 790
            E + P  + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++            ++       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY V T +Q G + DK  W
Sbjct:  171 ETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGW 351          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_STAAM (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ilvE PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.493e-28
Identity = 69/181 (38.12%), Postives = 98/181 (54.14%), Query Frame = -2
Query:  266 EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNW 790
            E + P  + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++            ++       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY V T +Q G + DK  W
Sbjct:  171 ETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGW 351          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_STAAC (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus aureus (strain COL) GN=ilvE PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.493e-28
Identity = 69/181 (38.12%), Postives = 98/181 (54.14%), Query Frame = -2
Query:  266 EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNW 790
            E + P  + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII++A++ G++            ++       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY V T +Q G + DK  W
Sbjct:  171 ETLKPTKIYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYIEEVGSMNIFFVENGKVITPELNGSILPGITRKSIIELAKNLGYEVEERRVSIDELFESYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNETGEITQKLYDVYTGIQNGTLEDKNGW 351          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_STAES (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ilvE PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.264e-27
Identity = 68/178 (38.20%), Postives = 95/178 (53.37%), Query Frame = -2
Query:  254 LVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLEL 769
            + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII +A+  G++            +A       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY   T +Q G + DK  W +E+
Sbjct:  178 IYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYVEEVGSMNIFFVENGKVVTPALNGSILPGITRKSIIQLAEDLGYEVEERRVSIEELFNAYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNEPGKITQKLYDTYTGIQSGKLEDKYGWRVEV 355          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_STAEQ (Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ilvE PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.264e-27
Identity = 68/178 (38.20%), Postives = 95/178 (53.37%), Query Frame = -2
Query:  254 LVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLEL 769
            + VE E  RA  GG G  K  GNY             GY  VL+LD V ++Y+EEV S NIF V+   + TP + G+ILPGITRKSII +A+  G++            +A       EVF +GTA V+SPVG++ Y  + +       G ++Q+LY   T +Q G + DK  W +E+
Sbjct:  178 IYVEDEYVRAVRGGVGFAKVAGNYAASLLAQTNANKLGYDQVLWLDGVEQKYVEEVGSMNIFFVENGKVVTPALNGSILPGITRKSIIQLAEDLGYEVEERRVSIEELFNAYDKGELTEVFGSGTAAVISPVGTLRYEDREIVINNNEPGKITQKLYDTYTGIQSGKLEDKYGWRVEV 355          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_STRCO (Probable branched-chain-amino-acid aminotransferase OS=Streptomyces coelicolor GN=ilvE PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.477e-24
Identity = 62/180 (34.44%), Postives = 94/180 (52.22%), Query Frame = -2
Query:  266 GIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQ-XXXXXXXXXXXLDAD-----EVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNW 787
            G+ P+++ V  +  RA PGG G  KT GNY            KG   V YLD + ++++EE+   N++ V GN I TP + G+IL G+TR S++ VA+  G++             D++     EVF  GTA V++PVG++   G +     G  G V+Q+L   L  +Q G +AD   W
Sbjct:  178 GVKPVSIWVSEDRVRAVPGGMGDAKTGGNYAASLLAQAEAAAKGCDQVCYLDAIERKWVEELGGMNLYFVYGNKIVTPSLTGSILEGVTRDSLLTVARDLGYEAEEGRVSVDQWQRDSENGTLTEVFACGTAAVITPVGTVKRAGAQWQQSGGETGEVTQRLRDALLDIQRGTVADPHGW 357          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_MYCTU (Probable branched-chain-amino-acid aminotransferase OS=Mycobacterium tuberculosis GN=ilvE PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.562e-22
Identity = 65/188 (34.57%), Postives = 89/188 (47.34%), Query Frame = -2
Query:  254 GIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN----VISTPVIKGTILPGITRKSIIDVAQSQGFQ------XXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLEL 787
            GIAP+++ V  E  RA PGGTG  K  GNY             G   V++LD V +RY+EE+   NIF V G+     + TP + G++LPGITR S++ +A   GF                   +  EVF  GTA V++PV  + +        +G  G V+  L   LT +Q G  AD   W   L
Sbjct:  180 GIAPVSVWVSTEYVRACPGGTGAAKFGGNYAASLLAQAEAAENGCDQVVWLDAVERRYIEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGITRDSLLQLAIDAGFAVEERRIDIDEWQKKAAAGEITEVFACGTAAVITPVARVRHGASEFRIADGQPGEVTMALRDTLTGIQRGTFADTHGWMARL 367          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_MYCLE (Probable branched-chain-amino-acid aminotransferase OS=Mycobacterium leprae GN=ilvE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.773e-21
Identity = 62/188 (32.98%), Postives = 87/188 (46.28%), Query Frame = -2
Query:  254 GIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN----VISTPVIKGTILPGITRKSIIDVAQSQGFQ------XXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLEL 787
            GI P+ + V  E  RA+PGGTG  K  GNY             G   V++LD V +R++EE+   NIF V G+     + TP + G++LPG+TR S++ +A   GF                   +  EVF  GTA  ++PV  + Y     +   G  G V+  L   LT +Q G  AD   W   L
Sbjct:  180 GINPVTVWVSMEYVRASPGGTGAAKFGGNYAASLLAQTEAAANGCDQVVWLDAVERRFVEEMGGMNIFFVLGSGGSARLVTPELSGSLLPGVTRASLLQLAIDAGFSVEERKIDIDEWQKKAAAGEITEVFACGTAAFITPVSRVKYGDTEFTIAGGAPGEVTMALRDTLTGIQRGTFADTHGWMARL 367          
The following BLAST results are available for this feature:
BLAST of CB290209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ILVE_STAAS1.493e-2838.12Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAR1.493e-2838.12Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAN1.493e-2838.12Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAM1.493e-2838.12Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAAC1.493e-2838.12Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAES1.264e-2738.20Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STAEQ1.264e-2738.20Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_STRCO8.477e-2434.44Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_MYCTU3.562e-2234.57Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_MYCLE8.773e-2132.98Probable branched-chain-amino-acid aminotransferas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa11_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290209 ID=CB290209; Name=CB290209; organism=Citrus sinensis; type=EST; length=809bp
TATATGTACCCAAGTGAAGCCAAATGGGATGCGGGATGTACTAAGTGGAA
CATACCCAGCAACAAATATTTCTCATAGTAACTTGAGAACAAATTTGAAT
ATCAAACATAAAGAAGGCAGCAAACTAAAGAAATCTGAGTCACCACCGTA
TATTTAGACCCGCCAACAGCTCAGTCCAAGGATCAGTGAACCTATGAAAG
ATGGACAGATTTGAAATGCAAACCAAAACCAGTAACTTAACCATGATCTA
GCTGAGCTCAAGGGTCCAATTCATCTTGTCCGCTATAAAACCCATCTGTA
GTTGGGTAAGCACGGAATATAATTGCTGTGACACCGCACCGAAACCACCC
TCCCCGTAGGATACCCTTTTACCAAGATAAGTGATGCTTCCCACAGGAGA
TACAACAACAGCTGTACCAGTACAAAAAACTTCATCAGCATCAAGTAACT
CCTCCACTGTCACAAGGCGTTCCTCAACCTGGAACCCTTGGCTTTGAGCA
ACATCAATTATACTCTTTCTTGTAATGCCAGGTAAGATAGTTCCTTTTAT
CACAGGAGTGGATATAACATTGCCCTTCACGACAAAAATGTTGCAAGAGG
AAACCTCTTCCAGGTATCTCTTGTGAACACAATCAAGGTAAAGAACATCA
GAATAACCTTTGGCCTTCGCAGCAGATTGAGCCTTAAGAACCGCAGCATA
GTTTCCTATAGTCTTTACGCCTCCAGTTCCCCCAGGAGTTGCACGATGTA
ATTCATGCTCAACAACCAAATTTATGGGTGCAATGCCTTCCCAACGTTTG
TTTGCTAAA
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