CB290209

Overview
NameCB290209
Unique NameCB290209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4989 contig Csv1_Contig4989:40..848. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_HAEIN (Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.217e-15
Identity = 61/186 (32.80%), Postives = 90/186 (48.39%), Query Frame = -2
Query:  254 GIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKG-----YSDVLYLDCVHKRYLEEVSSCNIF-VVKGNVISTPVIKGTILPGITRKSIIDVAQSQ-GFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGK-RVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLEL 787
            G+AP N +   +  RA P GTGGVK  GNY            +G     ++D +YLD      +EEV + N F + K N   TP  + +ILP IT+ S++ +A+ + G +               E    GTA V++PVG I + GK  V   E   G V+++LY  LT +Q G I     W +++
Sbjct:  159 GLAPSNFITT-DYDRAAPMGTGGVKVGGNYAASLLPHELAAEQGTPERKFADAIYLDPKTHTKIEEVGAANFFGITKDNKFITPKSE-SILPSITKYSLLHIAKERLGMEAIEGDVYIDQLDQFVEAGACGTAAVITPVGGIQHNGKFHVFDSETEVGPVTRRLYDELTGIQFGDIEAPEGWIVKV 342          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: BCAT_DICDI (Branched-chain-amino-acid aminotransferase OS=Dictyostelium discoideum GN=bcaA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.500e-12
Identity = 54/157 (34.39%), Postives = 75/157 (47.77%), Query Frame = -2
Query:  359 EGIAPINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGN------VISTPVIKGTILPGITRKSIIDVAQSQG-FQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGKRVS 790
            EG  P+ L+ + +  RA  GG+G  K   NY            KG+S VL+L      Y+ EV + N+FV   N      +I+ P+  GTILPG+TR SI+ + Q  G F+             A       E F  GTA +VSP+ SI+Y G+  S
Sbjct:  188 EGFKPVKLIADDQYVRAWAGGSGAFKLGSNYAPTIFPQLEAAKKGFSQVLWL---LNDYVTEVGTMNMFVFWNNAQGEKELITPPLGDGTILPGVTRDSILKLTQQWGEFKITEKNFTMTELAKAIKEGRVFEAFGAGTAAIVSPIESISYKGENYS 341          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_HELPJ (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.959e-12
Identity = 49/165 (29.70%), Postives = 74/165 (44.85%), Query Frame = -2
Query:  254 RATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQ-GFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLEL 745
            RA P GTGGVK  GNY            +GY D +YLD      +EEV + N F +  +         +ILP +TRKS++ +A+     +               E    GTA +++P+  I +  K  SY     G +++QLY +L  +Q G      +W  E+
Sbjct:  177 RAAPKGTGGVKVGGNYAASLLAHKIATEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDDAFITPHSPSILPSVTRKSLMVLAKEHLKLKVEEREILIDELGAFKEAGACGTAAIITPIKEIAHNNK--SYSFEAPGNITKQLYDLLLSIQQGEQEAPKDWIFEV 339          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_SALTY (Branched-chain-amino-acid aminotransferase OS=Salmonella typhimurium GN=ilvE PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.700e-12
Identity = 48/150 (32.00%), Postives = 68/150 (45.33%), Query Frame = -2
Query:  266 KTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNW 715
            K  GNY             GY + + LD     Y+ E +  N+F VK  V+ TP    + LPGITR +II +A+  G +             ADEVF +GTA  ++PV S+      +  GEG  G V++++      L  G   DK  W
Sbjct:  160 KAGGNYLSSLLVGSEARRHGYQEGIALDV--NGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV----DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGW 303          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_SALTI (Branched-chain-amino-acid aminotransferase OS=Salmonella typhi GN=ilvE PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.700e-12
Identity = 48/150 (32.00%), Postives = 68/150 (45.33%), Query Frame = -2
Query:  266 KTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNW 715
            K  GNY             GY + + LD     Y+ E +  N+F VK  V+ TP    + LPGITR +II +A+  G +             ADEVF +GTA  ++PV S+      +  GEG  G V++++      L  G   DK  W
Sbjct:  160 KAGGNYLSSLLVGSEARRHGYQEGIALDV--NGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV----DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGW 303          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_HELPY (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.700e-12
Identity = 51/165 (30.91%), Postives = 76/165 (46.06%), Query Frame = -2
Query:  254 RATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDA-DEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLEL 745
            RA P GTGGVK  GNY            +GY D +YLD      +EEV + N F +  +         +ILP IT+KS++ +A+                LDA  E    GTA +++P+  I +  K  SY     G ++++LY +L  +Q G      +W  E+
Sbjct:  177 RAAPKGTGGVKVGGNYAASLLAHKMATEQGYDDCIYLDPTTHTKIEEVGAANFFGITHDDAFITPHSPSILPSITKKSLMVLAKEYLNLKVEEREILMDELDAFKEAGACGTAAIITPIKEIVHNNK--SYFFEAPGHITKRLYDLLLSIQQGEQEAPKDWIFEV 339          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_ECOLI (Branched-chain-amino-acid aminotransferase OS=Escherichia coli (strain K12) GN=ilvE PE=1 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.700e-12
Identity = 48/150 (32.00%), Postives = 68/150 (45.33%), Query Frame = -2
Query:  266 KTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNW 715
            K  GNY             GY + + LD     Y+ E +  N+F VK  V+ TP    + LPGITR +II +A+  G +             ADEVF +GTA  ++PV S+      +  GEG  G V++++      L  G   DK  W
Sbjct:  160 KAGGNYLSSLLVGSEARRHGYQEGIALDV--NGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV----DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGW 303          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_ECOL6 (Branched-chain-amino-acid aminotransferase OS=Escherichia coli O6 GN=ilvE PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.700e-12
Identity = 48/150 (32.00%), Postives = 68/150 (45.33%), Query Frame = -2
Query:  266 KTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNW 715
            K  GNY             GY + + LD     Y+ E +  N+F VK  V+ TP    + LPGITR +II +A+  G +             ADEVF +GTA  ++PV S+      +  GEG  G V++++      L  G   DK  W
Sbjct:  160 KAGGNYLSSLLVGSEARRHGYQEGIALDV--NGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV----DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGW 303          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: ILVE_ECO57 (Branched-chain-amino-acid aminotransferase OS=Escherichia coli O157:H7 GN=ilvE PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.700e-12
Identity = 48/150 (32.00%), Postives = 68/150 (45.33%), Query Frame = -2
Query:  266 KTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNVISTPVIKGTILPGITRKSIIDVAQSQGFQXXXXXXXXXXXLDADEVFCTGTAVVVSPVGSITYLGKRVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNW 715
            K  GNY             GY + + LD     Y+ E +  N+F VK  V+ TP    + LPGITR +II +A+  G +             ADEVF +GTA  ++PV S+      +  GEG  G V++++      L  G   DK  W
Sbjct:  160 KAGGNYLSSLLVGSEARRHGYQEGIALDV--NGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSV----DGIQVGEGRCGPVTKRIQQAFFGLFTGETEDKWGW 303          
BLAST of CB290209 vs. ExPASy Swiss-Prot
Match: BCAT1_RAT (Branched-chain-amino-acid aminotransferase, cytosolic OS=Rattus norvegicus GN=Bcat1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.166e-11
Identity = 61/190 (32.11%), Postives = 90/190 (47.37%), Query Frame = -2
Query:  254 APINLVVEHELHRATPGGTGGVKTIGNYXXXXXXXXXXXXKGYSDVLYLDCVHKRYLEEVSSCNIFVVKGNV-----ISTPVIKGTILPGITRKSIIDVAQSQG-FQXXXXXXXXXXXLDA------DEVFCTGTAVVVSPVGSITYLGK--RVSYGEGGFGAVSQQLYSVLTQLQMGFIADKMNWTLEL 781
            +P++L    +  R+  GGTG  K   NY             G   VL+L     R + EV + N+F+   N      ++TP + G ILPG+TR+SI+++ +  G F+             A       E+F +GTA VV PV SI Y G+   +   E G   +S ++ + LT +Q G I  K  WTLEL
Sbjct:  225 SPVSLWANPKFVRSWKGGTGDFKMGCNYGSSLLAQCEAAENGCHQVLWLYGKENR-ITEVGTMNLFLYWINKDGEEELATPPLDGVILPGVTRQSILELGEEWGEFKVCERHITMDDLSTALEENRVKEMFGSGTACVVCPVASILYKGQMLHIPTMENGH-KLSSRIMAKLTDIQYGRI--KSEWTLEL 410          
The following BLAST results are available for this feature:
BLAST of CB290209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
ILVE_HAEIN4.217e-1532.80Branched-chain-amino-acid aminotransferase OS=Haem... [more]
BCAT_DICDI1.500e-1234.39Branched-chain-amino-acid aminotransferase OS=Dict... [more]
ILVE_HELPJ1.959e-1229.70Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_SALTY5.700e-1232.00Branched-chain-amino-acid aminotransferase OS=Salm... [more]
ILVE_SALTI5.700e-1232.00Branched-chain-amino-acid aminotransferase OS=Salm... [more]
ILVE_HELPY5.700e-1230.91Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_ECOLI5.700e-1232.00Branched-chain-amino-acid aminotransferase OS=Esch... [more]
ILVE_ECOL65.700e-1232.00Branched-chain-amino-acid aminotransferase OS=Esch... [more]
ILVE_ECO575.700e-1232.00Branched-chain-amino-acid aminotransferase OS=Esch... [more]
BCAT1_RAT2.166e-1132.11Branched-chain-amino-acid aminotransferase, cytoso... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01aa11_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01aa11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290209 ID=CB290209; Name=CB290209; organism=Citrus sinensis; type=EST; length=809bp
TATATGTACCCAAGTGAAGCCAAATGGGATGCGGGATGTACTAAGTGGAA
CATACCCAGCAACAAATATTTCTCATAGTAACTTGAGAACAAATTTGAAT
ATCAAACATAAAGAAGGCAGCAAACTAAAGAAATCTGAGTCACCACCGTA
TATTTAGACCCGCCAACAGCTCAGTCCAAGGATCAGTGAACCTATGAAAG
ATGGACAGATTTGAAATGCAAACCAAAACCAGTAACTTAACCATGATCTA
GCTGAGCTCAAGGGTCCAATTCATCTTGTCCGCTATAAAACCCATCTGTA
GTTGGGTAAGCACGGAATATAATTGCTGTGACACCGCACCGAAACCACCC
TCCCCGTAGGATACCCTTTTACCAAGATAAGTGATGCTTCCCACAGGAGA
TACAACAACAGCTGTACCAGTACAAAAAACTTCATCAGCATCAAGTAACT
CCTCCACTGTCACAAGGCGTTCCTCAACCTGGAACCCTTGGCTTTGAGCA
ACATCAATTATACTCTTTCTTGTAATGCCAGGTAAGATAGTTCCTTTTAT
CACAGGAGTGGATATAACATTGCCCTTCACGACAAAAATGTTGCAAGAGG
AAACCTCTTCCAGGTATCTCTTGTGAACACAATCAAGGTAAAGAACATCA
GAATAACCTTTGGCCTTCGCAGCAGATTGAGCCTTAAGAACCGCAGCATA
GTTTCCTATAGTCTTTACGCCTCCAGTTCCCCCAGGAGTTGCACGATGTA
ATTCATGCTCAACAACCAAATTTATGGGTGCAATGCCTTCCCAACGTTTG
TTTGCTAAA
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