CB290217

Overview
NameCB290217
Unique NameCB290217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:8..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATL1_RAT (Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 5.481e-38
Identity = 85/194 (43.81%), Postives = 115/194 (59.28%), Query Frame = 1
Query:  193 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            D    A +  W   H + Y    E+E R  ++++N+R I  HN E    K G    +N F D+TNEE+R +  G R        K K+   +   +   +P +VDWR+KG V  VK+QG CGSCWAFS    +EG   + TG LISLSEQ LVDC     N+GCNGGLMD+AF++I +NGG+D+E+ YPY+A D
Sbjct:   22 DQTFNAQWHQWKSTHRRLYGT-NEEEWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQ------KHKKGRLFQEPLMLQIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLEGQMFLKTGKLISLSEQNLVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKD 208          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.159e-38
Identity = 86/191 (45.03%), Postives = 115/191 (60.21%), Query Frame = 1
Query:  214 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            F ++  K  K+Y    E + RF +FK NL     H + + T + G+ +F+DLT  E+R   LG +   KR  L +       LP     LP+  DWR+KGAV  VKDQGSCGSCWAFST  A+EG + + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+++++GG+  EKDY Y   D
Sbjct:   48 FTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLK---KRLRLPAHAQKAPILPTTN--LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRD 233          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CYSP4_DICDI (Cysteine proteinase 4 OS=Dictyostelium discoideum GN=cprD PE=2 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 7.159e-38
Identity = 88/218 (40.37%), Postives = 124/218 (56.88%), Query Frame = 1
Query:  118 VSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGS---LISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            V S L + +VSY    +  S       +    F  W+  H + Y++  E   R++IFK N+ ++ + NS+     +GLN FAD+TN+EYR+ +LG  F         +       ++      +VDWR +GAV  +K+QG CG CW+FST  + EG + I +G+   L+SLSEQ L+DC  SY N GC GGLM  AFE+II+N GIDTE  YPY A D
Sbjct:    3 VLSFLCLLLVSYASAKQQFSEL-----QYRNAFTNWMQAHQRTYSS-EEFNARYQIFKSNMDYVHQWNSKGGETVLGLNVFADITNQEYRTTYLGTPFDGSALIGTEEE------KIFSTPAPTVDWRAQGAVTPIKNQGQCGGCWSFSTTGSTEGAHFIASGTKKDLVSLSEQNLIDCSKSYGNNGCEGGLMTLAFEYIINNKGIDTESSYPYTAED 208          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 7.159e-38
Identity = 83/200 (41.50%), Postives = 122/200 (61.00%), Query Frame = 1
Query:  175 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            S++   D  + A +  W   H + Y  + E+  R  ++++N++ I+ HN E R    ++ + +N F D+T+EE+R +  G +      + K ++   +   +    P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG LISLSEQ LVDC     NEGCNGGLMDYAF+++ DNGG+D+E+ YPY+A +
Sbjct:   16 SATLTFDHSLEAQWTKWKAMHNRLYG-MNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQ------NRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATE 208          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.083e-37
Identity = 90/232 (38.79%), Postives = 135/232 (58.19%), Query Frame = 1
Query:   88 MAMFLLFLFTVSSALDMSIVSYDKTHES----KSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRT---YKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEAL---PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKA 753
            M   +L LF   S L +S  S   TH S      + + T  +V ++F+ W  +HG+ Y+   E+ KR EIFK N  +I + N+  ++   +++GLN+FAD+T +E+   +L A    K  S + K +N+ + +   +    P S DWRKKG + +VK QG CG  WAFS   A+E  + I TG L+SLSEQELVDC    +EG   G    +FE+++++GGI T+ DYPY+A
Sbjct:    1 MGFLVLLLF---SLLGLSSSSSISTHRSILDLDLTKFTTQKQVSSLFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQA---PKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVDC-VEESEGSYNGWQYQSFEWVLEHGGIATDDDYPYRA 225          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 2.083e-37
Identity = 88/201 (43.78%), Postives = 123/201 (61.19%), Query Frame = 1
Query:  157 KTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNS-ENRTYKVGLNRFADLTNEEYRSMH-LGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKA 753
            KTH+  S  +   D+V  +F  + V+ G+ Y +  E++ R  IF++NL+ I+E N+ E  + K G+  FAD+T+ EY+    L  R  AK T      S   +P     LP   DWR+K AV +VK+QGSCGSCWAFS    +EG+  + TG L   SEQEL+DCDT+ +  CNGGLMD A++ I D GG++ E +YPYKA
Sbjct:  292 KTHKKHSHRF---DKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGLWQRDEAKATG----GSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCDTT-DSACNGGLMDNAYKAIKDIGGLEYEAEYPYKA 484          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.083e-37
Identity = 82/196 (41.84%), Postives = 119/196 (60.71%), Query Frame = 1
Query:  175 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKDYPY 747
            S++ + D  + A +  W   HG+ Y  + E+  R  ++++N++ I+ HN E       + + +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC     N+GCNGGLMD AF+++ DNGG+DTE+ YPY
Sbjct:   16 SAAPKLDQNLDADWYKWKATHGRLYG-MNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKVFHESLVLEVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPY 204          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.553e-37
Identity = 79/189 (41.80%), Postives = 116/189 (61.38%), Query Frame = 1
Query:  208 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            A +  W   H + Y  + E+  R  ++++N++ I+ HN E      ++ + +N F D+T+EE+R +  G +      + K ++   +   +    P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC     NEGCNGGLMDYAF+++ DNGG+D+E+ YPY+A +
Sbjct:   27 AQWTKWKAMHNRLYG-MNEEGWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQ------NRKPRKGKVFQEPLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVADNGGLDSEESYPYEATE 208          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.553e-37
Identity = 84/200 (42.00%), Postives = 119/200 (59.50%), Query Frame = 1
Query:  175 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVG----LNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            S++ + D  + A +  W   H + Y  + E+  R  ++++N++ I+ HN E    K G    +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDWR+KG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  NEGCNGGLMD AF ++ DNGG+D+E+ YPY   D
Sbjct:   16 SAAPKFDQSLNAQWYQWKATHRRLYG-MNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKMFQEPLFAEIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRD 208          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.640e-37
Identity = 84/200 (42.00%), Postives = 120/200 (60.00%), Query Frame = 1
Query:  175 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            S++ + D  + A +  W   H + Y  + E+E R  ++++N + ID HN E       +++ +N F D+TNEE+R +  G +      + K K+   +   +   +P SVDW KKG V  VK+QG CGSCWAFS   A+EG     TG L+SLSEQ LVDC  +  N+GCNGGLMD AF++I DNG +D+E+ YPY A D
Sbjct:   16 SAAPKLDPNLDAHWHQWKATHRRLYG-MNEEEWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQ------NQKHKKGKLFHEPLLVDVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGCLDSEESYPYLATD 208          
The following BLAST results are available for this feature:
BLAST of CB290217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATL1_RAT5.481e-3843.81Cathepsin L1 OS=Rattus norvegicus GN=Ctsl1 PE=1 SV... [more]
CYSP_PEA7.159e-3845.03Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CYSP4_DICDI7.159e-3840.37Cysteine proteinase 4 OS=Dictyostelium discoideum ... [more]
CATL1_HUMAN7.159e-3841.50Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
P34_SOYBN2.083e-3738.79P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CPR1_DROME2.083e-3743.78Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATL1_PIG2.083e-3741.84Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_CERAE3.553e-3741.80Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATL1_CANFA3.553e-3742.00Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATL2_BOVIN4.640e-3742.00Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ab04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ab04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290217 ID=CB290217; Name=CB290217; organism=Citrus sinensis; type=EST; length=759bp
GTCTTTAGCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAATAGTT
CTTTTCTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGTTTT
TACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCT
TATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGA
GGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATA
ACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTT
AGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTT
GAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGG
GTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAAC
CGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAG
GAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTT
GCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTT
ACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATAC
ATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGT
TCATTATTGATAATGGAGGTATTGACACAGAAAAAGATTACCCCTACAAA
GCCATTGAT
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