CB290217

Overview
NameCB290217
Unique NameCB290217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:8..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATV_GVXN (Viral cathepsin OS=Xestia c-nigrum granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.934e-33
Identity = 88/232 (37.93%), Postives = 128/232 (55.17%), Query Frame = 1
Query:   94 MFLLFLFTVS----SALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYL-PRV--GEA---LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            MFL ++F V+    +   +S ++YD ++  +            +F  ++VK+ K Y    EKE RFEIFK+NL  I+  N+   +    +N  AD+++ E     L    G K + ++ ++ N +  P V  G++   +PDS DWR + +V  VK Q  CGSCWAFS +A +E +  I     + LSEQ+LVDCD   N GCNGGLM +AFE II  GGI  E  YPY  +D
Sbjct:   11 MFLPWVFCVALLTLNVCAVSYIAYDMSNAQE------------LFNEFVVKYNKVYKDDQEKEARFEIFKQNLADINARNALEDSAMFEINSRADISSNEL----LQKLTGLKLSLMRGEKKNSFCTPTVISGDSSGKVPDSFDWRDRNSVTSVKMQKECGSCWAFSAVANIESLYHIKHNVSLDLSEQQLVDCD-KVNNGCNGGLMSWAFEGIIRAGGISYEAPYPYTGVD 225          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.056e-33
Identity = 79/191 (41.36%), Postives = 109/191 (57.07%), Query Frame = 1
Query:  181 SWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDN--GGIDTEKDYPY 747
            S   ++ +   F A+  K+GK Y    E+  RF  F+EN+       + N     G+  F+D+T EE+R+ +   R GA   +   KR  + +       P +VDWR+KGAV  VK QG CGSCWAFSTI  +EG  ++    L+SLSEQ LV CDT  + GCNGGLMD AF +I+++  G + TE  YPY
Sbjct:   30 SLHVEESLEMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARY---RNGASYFAAAQKRLRKTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCDT-IDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPY 216          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CFAD_DICDI (Counting factor associated protein D OS=Dictyostelium discoideum GN=cfaD PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.183e-32
Identity = 66/186 (35.48%), Postives = 111/186 (59.68%), Query Frame = 1
Query:  193 DDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPY 747
            +++   +F+ +  ++ K Y++  E ++RF  FK   + I  HN++  +YK+G+N +ADL+N+E+ ++          T   S   +  L     ++P +VDWR +  V  VKDQG CGSCW F +  ++EG N +  G L+SLSEQ+LVDC   + ++GC GG    AF+++++ G + TE +YPY
Sbjct:  218 EEQASNLFKEYKAQYNKEYSSQDEHDERFINFKAARKIIATHNAKESSYKLGMNHYADLSNKEFNTLVKPKVARPSVTGADSVHDDESL----RSIPSTVDWRNQNCVTPVKDQGICGSCWTFGSTGSLEGTNCVTNGELVSLSEQQLVDCAILTGSQGCGGGFASSAFQYVMEIGSLATESNYPY 399          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATK_PIG (Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.183e-32
Identity = 81/201 (40.30%), Postives = 115/201 (57.21%), Query Frame = 1
Query:  175 SSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            SS+   ++ +   +E W   + K YN+  ++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G +     +     RSN   Y+P      PDS+D+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E  YPY   D
Sbjct:   14 SSALYPEEILDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHS-----RSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQD 208          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.183e-32
Identity = 76/180 (42.22%), Postives = 111/180 (61.67%), Query Frame = 1
Query:  214 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKG-AVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEKDYPY 747
            F++W+ +H K Y+++ E   R ++F  N R I  HN  N T+K+ LN+F+D++  E +   L +    +  +  + +SN YL   G   P S+DWRKKG  V+ VK+QG+C SCW FST  A+E    I +G ++SL+EQ+LVDC  ++ N GC GGL   AFE+I+ N GI  E  YPY
Sbjct:   33 FKSWMKQHQKTYSSV-EYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKHKFLWS----EPQNCSATKSN-YLRGTGP-YPSSMDWRKKGNVVSPVKNQGACASCWTFSTTGALESAVAIASGKMLSLAEQQLVDCAQAFNNHGCKGGLPSQAFEYILYNKGIMEEDSYPY 205          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.017e-32
Identity = 63/93 (67.74%), Postives = 78/93 (83.87%), Query Frame = 1
Query:  478 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAI 756
            LP+ +DWRKKGAV  VK+QGSCGSCWAFST++ VE IN+I TG+LISLSEQELVDCD   N GC GG   +A+++II+NGGIDT+ +YPYKA+
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK-NHGCLGGAFVFAYQYIINNGGIDTQANYPYKAV 92          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATL6_HUMAN (Putative cathepsin L-like protein 6 OS=Homo sapiens GN=CTSLL6 PE=5 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 2.017e-32
Identity = 69/153 (45.10%), Postives = 96/153 (62.75%), Query Frame = 1
Query:  307 IDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCD-TSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYK 750
            I++HN E      ++ + +N F D+TNEE+R +  G ++       K ++  ++  R+   +P SVDWR+KG +  VKDQG CGSCWAFS   A+EG     TG LISL+EQ LVDC     NEGCNGG MD  F ++ +NGG+D+E  YPY+
Sbjct:    2 IEQHNQEYSQGKHSFTMAMNAFGDMTNEEFRQVMNGFQYQ------KHRKGKQFQERLLPEIPTSVDWREKGYMTPVKDQGQCGSCWAFSATGALEGQMFWKTGKLISLNEQNLVDCSGPQGNEGCNGGFMDNPFRYVQENGGLDSEASYPYE 148          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATK_RABIT (Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.017e-32
Identity = 77/186 (41.40%), Postives = 106/186 (56.99%), Query Frame = 1
Query:  214 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            +E W   + K YN+  ++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G +    R+         Y+P      PDS+D+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N GC GG M  AF+++  N GID+E  YPY   D
Sbjct:   26 WELWKKTYSKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSRSH---SNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENYGCGGGYMTNAFQYVQRNRGIDSEDAYPYVGQD 207          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: CATK_CANFA (Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.635e-32
Identity = 79/188 (42.02%), Postives = 109/188 (57.98%), Query Frame = 1
Query:  214 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR--YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAID 759
            ++ W   + K YN+  ++  R  I+++NL+ I  HN E      TY++ +N   D+T+EE      G +     +     RSN   Y+P      PDSVD+RKKG V  VK+QG CGSCWAFS++ A+EG  K  TG L++LS Q LVDC  S N+GC GG M  AF+++  N GID+E  YPY   D
Sbjct:   27 WDLWKKTYRKQYNSKVDELSRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVPPSHS-----RSNDTLYIPDWESRAPDSVDYRKKGYVTPVKNQGQCGSCWAFSSVGALEGQLKKKTGKLLNLSPQNLVDC-VSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQD 208          
BLAST of CB290217 vs. ExPASy Swiss-Prot
Match: ERVB_TABDI (Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.666e-32
Identity = 64/93 (68.82%), Postives = 76/93 (81.72%), Query Frame = 1
Query:  478 LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEKDYPYKAI 756
            LP  VDWR KGAV  +K+Q  CGSCWAFS +AAVE INKI TG LISLSEQELVDCDT+ + GCNGG M+ AF++II NGGIDT+++YPY A+
Sbjct:    1 LPSFVDWRSKGAVNSIKNQKQCGSCWAFSAVAAVESINKIRTGQLISLSEQELVDCDTA-SHGCNGGWMNNAFQYIITNGGIDTQQNYPYSAV 92          
The following BLAST results are available for this feature:
BLAST of CB290217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CATV_GVXN6.934e-3337.93Viral cathepsin OS=Xestia c-nigrum granulosis viru... [more]
CYSP_TRYBB9.056e-3341.36Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CFAD_DICDI1.183e-3235.48Counting factor associated protein D OS=Dictyostel... [more]
CATK_PIG1.183e-3240.30Cathepsin K OS=Sus scrofa GN=CTSK PE=2 SV=1[more]
CATH_MOUSE1.183e-3242.22Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
ERVC_TABDI2.017e-3267.74Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATL6_HUMAN2.017e-3245.10Putative cathepsin L-like protein 6 OS=Homo sapien... [more]
CATK_RABIT2.017e-3241.40Cathepsin K OS=Oryctolagus cuniculus GN=CTSK PE=1 ... [more]
CATK_CANFA2.635e-3242.02Cathepsin K OS=Canis familiaris GN=CTSK PE=2 SV=1[more]
ERVB_TABDI7.666e-3268.82Ervatamin-B OS=Tabernaemontana divaricata PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ab04_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ab04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290217 ID=CB290217; Name=CB290217; organism=Citrus sinensis; type=EST; length=759bp
GTCTTTAGCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAAAATAGTT
CTTTTCTCAAAAGATGGGTTTGTTTAGATCACCAACCATGGCCATGTTTT
TACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTGTATCT
TATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGACGATGA
GGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGCTTATA
ACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAAATCTT
AGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTTGGGTT
GAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCATCTGG
GTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGAGCAAC
CGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGATTGGAG
GAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGGGAGTT
GCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGATTGTT
ACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTGTGATAC
ATCATATAATGAAGGATGTAATGGTGGTTTGATGGACTATGCATTCGAGT
TCATTATTGATAATGGAGGTATTGACACAGAAAAAGATTACCCCTACAAA
GCCATTGAT
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