CB290235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH_ASPTE (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Aspergillus terreus PE=3 SV=2) HSP 1 Score: 324.709 bits (831), Expect = 4.130e-88 Identity = 174/287 (60.63%), Postives = 211/287 (73.52%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFL--QNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELS 856 +RGCKAI A GGA +ML DGMTR P +RF SA RA+E + ++E P E LA FN +SRFARLQ + + AG LYIRF TTGDAMGMNM+SKGV+ L+ + + FPDM + +SGNFCSDKK AA+NWI GRGKSV+ EATI E V +VLKT+V LVELNT KN FNAHA+N+V A+F+ATGQDPAQNVESS CIT M+ I DG +LHI+V+MPS+EVGT+GGGT L +Q A L+LLGV+GA PG+N+R LA IVA +VLAGELS Sbjct: 737 SRGCKAINAGGGATTMLKGDGMTRGPCLRFPSAQRAAEAQRWVESPLGHEVLAAAFNATSRFARLQTLTVAQAGIYLYIRFRTTTGDAMGMNMISKGVEKALEAMAAEGGFPDMHTVTLSGNFCSDKKSAAINWIGGRGKSVIAEATIPAETVRQVLKTDVDALVELNTAKNLVGSAMAGSLGGFNAHASNLVQAVFLATGQDPAQNVESSSCITTMKNI-DG-NLHIAVSMPSMEVGTIGGGTILEAQGAMLDLLGVRGAHSTEPGANARRLARIVAAAVLAGELS 1021
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH_XENLA (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Xenopus laevis GN=hmgcr PE=2 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 5.394e-88 Identity = 167/288 (57.99%), Postives = 210/288 (72.92%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDG-KDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 NRGC+AI GGA S +L DGMTR P+VR +A A+E+K +L+ F+ + F+ +SRFARL +Q +AG+NLYIRF TGDAMGMNM+SK + L LQ +FPD+ V+ +SGN+C+DKKPAA+NWIEGRGKSVVCEA I +VV +VLK++ LVE+N KN +NAHAANIV+AI+IA GQD AQNV SS+CIT+MEA +DL+IS TMPSIE+GTVGGGT LA Q ACL +LGV+GAS E+PG N+ LA IV +V+AGELSLM Sbjct: 562 NRGCRAIMLGGGAKSRVLADGMTRGPVVRLPTACDAAEVKAWLDSAEGFKVIKDAFDSTSRFARLGRLQNCVAGRNLYIRFQSKTGDAMGMNMISKVTEQALARLQEEFPDLHVLAVSGNYCTDKKPAAINWIEGRGKSVVCEAIIPAKVVREVLKSSTEALVEVNINKNFIGSAMAGSIGGYNAHAANIVTAIYIACGQDAAQNVGSSNCITIMEATGPTYEDLYISCTMPSIEIGTVGGGTNLAPQQACLQMLGVQGASTETPGKNACQLAQIVCSTVMAGELSLM 849
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH_SCHPO (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Schizosaccharomyces pombe GN=hmg1 PE=1 SV=2) HSP 1 Score: 324.324 bits (830), Expect = 5.394e-88 Identity = 168/287 (58.54%), Postives = 210/287 (73.17%), Query Frame = 2 Query: 5 RGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQND--FPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSL 859 RGCKAI A GGA ++L RD M+R P V F + RA K +L+ P E + FN +SRFARLQHI+ ++AG L+IRFC +TGDAMGMNM+SKGV++ L + ND F DM VI +SGN+C+DKKPAA+NWI+GRGKSV+ EA I + V VLKT V LV+LN KN FNAHAANIV+A+++ATGQDPAQNVESS+CIT+M+ + DG +L +SV+MPSIEVGT+GGGT L Q A L+LLGV+GA SPG NSR LA +VA +V+AGELSL Sbjct: 721 RGCKAINAGGGAVTVLTRDQMSRGPCVAFPNLTRAGRAKIWLDSPEGQEVMKKAFNSTSRFARLQHIKTALAGTRLFIRFCTSTGDAMGMNMISKGVEHALVVMSNDAGFDDMQVISVSGNYCTDKKPAAINWIDGRGKSVIAEAIIPGDAVKSVLKTTVEDLVKLNVDKNLIGSAMAGSVGGFNAHAANIVTAVYLATGQDPAQNVESSNCITLMDNV-DG-NLQLSVSMPSIEVGTIGGGTVLEPQGAMLDLLGVRGAHMTSPGDNSRQLARVVAAAVMAGELSL 1005
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH_ASPTN (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_09965 PE=3 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 5.394e-88 Identity = 174/287 (60.63%), Postives = 211/287 (73.52%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFL--QNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELS 856 +RGCKAI A GGA +ML DGMTR P +RF SA RA+E + ++E P E LA FN +SRFARLQ + + AG LYIRF TTGDAMGMNM+SKGV+ L+ + + FPDM + +SGNFCSDKK AA+NWI GRGKSV+ EATI E V +VLKT+V LVELNT KN FNAHA+N+V A+F+ATGQDPAQNVESS CIT M+ I DG +LHI+V+MPS+EVGT+GGGT L +Q A L+LLGV+GA PG+N+R LA IVA +VLAGELS Sbjct: 737 SRGCKAINAGGGATTMLKGDGMTRGPCLRFPSAQRAAEAQRWVESPLGHEVLAAAFNATSRFARLQTLTVAQAGIYLYIRFRTTTGDAMGMNMISKGVEKALEAMAAEGGFPDMHTVTLSGNFCSDKKSAAINWIGGRGKSVIAEATIPAETVRQVLKTDVDALVELNTAKNLVGSAMAGSLGGFNAHASNLVQAVFLATGQDPAQNVESSSCITTMKNI-DG-NLHIAVSMPSMEVGTIGGGTILEAQGAMLDLLGVRGAHATEPGANARRLARIVAAAVLAGELS 1021
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH1_YEAST (3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Saccharomyces cerevisiae GN=HMG1 PE=1 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 1.329e-86 Identity = 168/287 (58.54%), Postives = 212/287 (73.87%), Query Frame = 2 Query: 5 RGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDF--PDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSL 859 RGCKAI A GGA ++L +DGMTR P+VRF + R+ K +L+ + FN +SRFARLQHIQ +AG L++RF TTGDAMGMNM+SKGV+ L + ++ DM+V+ +SGN+C+DKKPAA+NWIEGRGKSVV EATI +VV KVLK++V+ LVELN KN FNAHAAN+V+A+F+A GQDPAQNVESS+CIT+M+ + DG DL ISV+MPSIEVGT+GGGT L Q A L+LLGV+G +PG+N+R LA IVA +VLAGELSL Sbjct: 723 RGCKAINAGGGATTVLTKDGMTRGPVVRFPTLKRSGACKIWLDSEEGQNAIKKAFNSTSRFARLQHIQTCLAGDLLFMRFRTTTGDAMGMNMISKGVEYSLKQMVEEYGWEDMEVVSVSGNYCTDKKPAAINWIEGRGKSVVAEATIPGDVVRKVLKSDVSALVELNIAKNLVGSAMAGSVGGFNAHAANLVTAVFLALGQDPAQNVESSNCITLMKEV-DG-DLRISVSMPSIEVGTIGGGTVLEPQGAMLDLLGVRGPHATAPGTNARQLARIVACAVLAGELSL 1007
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH2_YEAST (3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Saccharomyces cerevisiae GN=HMG2 PE=1 SV=1) HSP 1 Score: 317.39 bits (812), Expect = 6.594e-86 Identity = 166/287 (57.84%), Postives = 212/287 (73.87%), Query Frame = 2 Query: 5 RGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDF--PDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSL 859 RGCKAI A GGA ++L +DGMTR P+VRF + +R+ K +L+ ++ FN +SRFARLQHIQ +AG L++RF TTGDAMGMNM+SKGV+ L + ++ DM+V+ +SGN+C+DKKPAA+NWIEGRGKSVV EATI +VV VLK++V+ LVELN KN FNAHAAN+V+A+F+A GQDPAQNVESS+CIT+M+ + DG DL ISV+MPSIEVGT+GGGT L Q A L+LLGV+G PG+N+R LA I+A +VLAGELSL Sbjct: 719 RGCKAINAGGGATTVLTKDGMTRGPVVRFPTLIRSGACKIWLDSEEGQNSIKKAFNSTSRFARLQHIQTCLAGDLLFMRFRTTTGDAMGMNMISKGVEYSLKQMVEEYGWEDMEVVSVSGNYCTDKKPAAINWIEGRGKSVVAEATIPGDVVKSVLKSDVSALVELNISKNLVGSAMAGSVGGFNAHAANLVTALFLALGQDPAQNVESSNCITLMKEV-DG-DLRISVSMPSIEVGTIGGGTVLEPQGAMLDLLGVRGPHPTEPGANARQLARIIACAVLAGELSL 1003
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH_STRPU (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Strongylocentrotus purpuratus GN=HMGCR PE=2 SV=2) HSP 1 Score: 310.457 bits (794), Expect = 8.061e-84 Identity = 156/288 (54.17%), Postives = 208/288 (72.22%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAIN-DGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 NRGC+A+ ++GG S+L+ DGMTR P+VR SA A +K +LE P NF + F +SRFA+L+ IQ ++AG+ +++RF TGDAMGMNM+SKG + L LQ FP+++++ +SGN+C+DKK AA+NWIEGRGKSVVCEAT+ +V +VLKT+ + LV+LN KN FNAHAANIV+AI+IATGQD AQN+ SS+C+T+ME G DL++S TMPSIE+GTVGGGT L QSACL ++ VKG++ G N+ LA IV +V+AGELSLM Sbjct: 583 NRGCRALRSAGGIHSVLIGDGMTRGPLVRLPSAQEAGAIKQWLEVPENFAAIKERFESTSRFAKLKSIQTALAGRYMFLRFKALTGDAMGMNMISKGTEQALHALQTMFPNIEIMSLSGNYCTDKKVAAINWIEGRGKSVVCEATVPAHIVQQVLKTSASALVDLNIHKNLVGSAMAGSIGGFNAHAANIVTAIYIATGQDAAQNIASSNCMTLMETRGPKGGDLYLSCTMPSIELGTVGGGTVLPPQSACLQMMDVKGSNIHGSGLNASQLARIVCATVMAGELSLM 870
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH_GIBFU (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Gibberella fujikuroi GN=HMGR PE=3 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.520e-82 Identity = 161/288 (55.90%), Postives = 206/288 (71.53%), Query Frame = 2 Query: 2 NRGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQND--FPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSL 859 +RGCKAI + GGA ++L DGMTR P V F + RA K +L+ + + FN +SRFARLQ ++ ++AG NLYIRF TTGDAMGMNM+SKGV++ L + ND F DM +I +SGN+C+DKK AA+NWI+GRGK VV EA I EVV VLK++V +LVELN KN FNAHAANIV+AIF+ATGQDPAQ VES++CIT+M+ +N L ISV+MPS+EVGT+GGGT L Q A L++LGV+G+ +PG N+R LA I+ +VLAGELSL Sbjct: 626 SRGCKAINSGGGAITVLTADGMTRGPCVAFETLERAGAAKLWLDSEAGQDMMKKAFNSTSRFARLQSMKTALAGTNLYIRFKTTTGDAMGMNMISKGVEHALSVMANDGGFDDMQIISVSGNYCTDKKAAALNWIDGRGKGVVAEAIIPGEVVRSVLKSDVDSLVELNVAKNLIGSAMAGSVGGFNAHAANIVAAIFLATGQDPAQVVESANCITIMKNLNGA--LQISVSMPSLEVGTLGGGTILEPQGAMLDILGVRGSHPTNPGDNARRLARIIGAAVLAGELSL 911
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH2_HEVBR (3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 (Fragment) OS=Hevea brasiliensis GN=HMGR2 PE=2 SV=1) HSP 1 Score: 302.368 bits (773), Expect = 2.195e-81 Identity = 157/183 (85.79%), Postives = 162/183 (88.52%), Query Frame = 2 Query: 314 LQNDFPDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 L++DF DMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEA IKEEVV KVLKT+VA LVELN LKN FNAHA NIVSAIFIATGQDPAQNVESSHCITMMEA+NDGKDLHISVT+PSIEVGTVGGGTQLASQSACLNLLGV GA KESPGS SRLLATIVAGSVLAGELSLM Sbjct: 1 LESDFADMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEAIIKEEVVKKVLKTDVALLVELNMLKNLAGSAVAGALGGFNAHAGNIVSAIFIATGQDPAQNVESSHCITMMEAVNDGKDLHISVTLPSIEVGTVGGGTQLASQSACLNLLGVMGACKESPGSYSRLLATIVAGSVLAGELSLM 183
BLAST of CB290235 vs. ExPASy Swiss-Prot
Match: HMDH_PICJA (3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Pichia jadinii GN=HMG PE=2 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 3.170e-80 Identity = 158/288 (54.86%), Postives = 203/288 (70.49%), Query Frame = 2 Query: 5 RGCKAIYASGGAASMLLRDGMTRAPIVRFASAMRASELKFFLEDPNNFETLAVVFNRSSRFARLQHIQCSIAGKNLYIRFCCTTGDAMGMNMVSKGVQNVLDFLQNDF--PDMDVIGISGNFCSDKKPAAVNWIEGRGKSVVCEATIKEEVVTKVLKTNVATLVELNTLKNXXXXXXXXXXXXFNAHAANIVSAIFIATGQDPAQNVESSHCITMMEAINDGKDLHISVTMPSIEVGTVGGGTQLASQSACLNLLGVKGASKESPGSNSRLLATIVAGSVLAGELSLM 862 RGCKAI GG ++L +DGMTR P V+F S RA + K +L+ E + FN +SRFARLQH+Q ++AG L+IRF TGDAMGMNM+SKGV+ L + F DM V+ +SGN+C+DKKPAAVNWI GRGKSVV EA+I ++ V KVLK++V +V++N KN FNA AAN+V+A+++A GQDPAQNVESS+CIT+M DG DL +SV+MPSIEVGT+GGGT L Q + L LLGV+G + + PG N+R LA IVA VL+GELSL+ Sbjct: 627 RGCKAINLGGGVTTVLTKDGMTRGPCVKFPSLKRAGQCKLWLDSDEGQEEMKKAFNSTSRFARLQHLQTALAGDLLFIRFRTVTGDAMGMNMISKGVEYALKQMTEVFGWDDMMVVSVSGNYCTDKKPAAVNWINGRGKSVVAEASIPKDAVVKVLKSSVKAVVDVNVNKNLIGSAMAGSVGGFNAQAANMVTAVYLALGQDPAQNVESSNCITLMTETEDG-DLKVSVSMPSIEVGTIGGGTILDPQGSMLELLGVRGPA-DVPGENARQLAKIVASIVLSGELSLV 912 The following BLAST results are available for this feature:
BLAST of CB290235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290235 ID=CB290235; Name=CB290235; organism=Citrus sinensis; type=EST; length=862bpback to top |