CB290252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_RICCN (Superoxide dismutase [Mn/Fe] OS=Rickettsia conorii GN=sodB PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.032e-27 Identity = 65/181 (35.91%), Postives = 86/181 (47.51%), Query Frame = -1 Query: 298 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 840 YV NLN + E K LE+++ S + FNNAAQ WNH FFW I +DFGS QFGSGWAWL+Y D L ++KT NA P+ PLL DVWEHAYY+D++N+RPDY+ +F+ +++W+ V L Sbjct: 46 YVQNLNNLLKDKEELQKKDLEEIIEWSSQNSNAA-IFNNAAQIWNHTFFWHSIKPQGGGKPSGKILEQINKDFGSFEEFCEQFKQEAVGQFGSGWAWLIYH------------------DNRLQIIKTANAGTPIAHGMKPLLACDVWEHAYYIDYRNKRPDYVDIFIKHMINWKFVEDNL 207
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_SALTY (Superoxide dismutase [Fe] OS=Salmonella typhimurium GN=sodB PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 5.124e-27 Identity = 73/181 (40.33%), Postives = 89/181 (49.17%), Query Frame = -1 Query: 298 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 840 YV NLN I GT +GKSLE++V S +G + FNNAAQ WNH F+W I FGS FGSGW WLV D L +V T NA PL D +PLLT+DVWEHAYY+D++N RP+Y+ F LV+WE V+K L Sbjct: 35 YVTNLNNLIKGTAF-EGKSLEEIVRTS--EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAIKNFGSGWTWLV-----------------KSADGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPNYLEHFW-ALVNWEFVAKNL 191
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_SALTI (Superoxide dismutase [Fe] OS=Salmonella typhi GN=sodB PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 5.124e-27 Identity = 73/181 (40.33%), Postives = 89/181 (49.17%), Query Frame = -1 Query: 298 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 840 YV NLN I GT +GKSLE++V S +G + FNNAAQ WNH F+W I FGS FGSGW WLV D L +V T NA PL D +PLLT+DVWEHAYY+D++N RP+Y+ F LV+WE V+K L Sbjct: 35 YVTNLNNLIKGTAF-EGKSLEEIVRTS--EGGI---FNNAAQVWNHTFYWNCLAPNAGGEPTGKLADAIAASFGSFAEFKAQFTDAAIKNFGSGWTWLV-----------------KSADGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPNYLEHFW-ALVNWEFVAKNL 191
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_SHIFL (Superoxide dismutase [Fe] OS=Shigella flexneri GN=sodB PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 8.740e-27 Identity = 71/181 (39.23%), Postives = 86/181 (47.51%), Query Frame = -1 Query: 298 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 840 YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV D L +V T NA PL D +PLLT+DVWEHAYY+D++N RP Y+ F LV+WE V+K L Sbjct: 35 YVTNLNNLIKGTAF-EGKSLEEIIRSSEGG-----VFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV-----------------KNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFW-ALVNWEFVAKNL 191
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_ECOLI (Superoxide dismutase [Fe] OS=Escherichia coli (strain K12) GN=sodB PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 8.740e-27 Identity = 71/181 (39.23%), Postives = 86/181 (47.51%), Query Frame = -1 Query: 298 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 840 YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV D L +V T NA PL D +PLLT+DVWEHAYY+D++N RP Y+ F LV+WE V+K L Sbjct: 35 YVTNLNNLIKGTAF-EGKSLEEIIRSSEGG-----VFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV-----------------KNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFW-ALVNWEFVAKNL 191
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_ECOL6 (Superoxide dismutase [Fe] OS=Escherichia coli O6 GN=sodB PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 8.740e-27 Identity = 71/181 (39.23%), Postives = 86/181 (47.51%), Query Frame = -1 Query: 298 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 840 YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV D L +V T NA PL D +PLLT+DVWEHAYY+D++N RP Y+ F LV+WE V+K L Sbjct: 35 YVTNLNNLIKGTAF-EGKSLEEIIRSSEGG-----VFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV-----------------KNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFW-ALVNWEFVAKNL 191
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_ECO57 (Superoxide dismutase [Fe] OS=Escherichia coli O157:H7 GN=sodB PE=3 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 8.740e-27 Identity = 71/181 (39.23%), Postives = 86/181 (47.51%), Query Frame = -1 Query: 298 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 840 YV NLN I GT +GKSLE+++ +S FNNAAQ WNH F+W I FGS FGSGW WLV D L +V T NA PL D +PLLT+DVWEHAYY+D++N RP Y+ F LV+WE V+K L Sbjct: 35 YVTNLNNLIKGTAF-EGKSLEEIIRSSEGG-----VFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLV-----------------KNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFW-ALVNWEFVAKNL 191
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_LEGPH (Superoxide dismutase [Fe] OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=sodB PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.141e-26 Identity = 70/182 (38.46%), Postives = 93/182 (51.10%), Query Frame = -1 Query: 295 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 840 YV NLNK I GTE + +LE++++ + KG + FNNAAQ WNH F+W I + FGS AT FGSGWAWLV ++ +L ++ T NA P+ + LLT DVWEHAYY+D++NRRPDYI F LV+W+ S L+ Sbjct: 35 YVTNLNKLIPGTEF-ESMTLEEIIMKA--KGGI---FNNAAQVWNHTFYWHSMSPNGGGEPKGRLAEAINKSFGSFAAFKEQFSQTAATTFGSGWAWLV-----------------QDQSGALKIINTSNAGTPMTEGLNALLTCDVWEHAYYIDYRNRRPDYIEAFW-SLVNWDFASSNLK 192
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_RICTY (Superoxide dismutase [Mn/Fe] OS=Rickettsia typhi GN=sodB PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.663e-26 Identity = 63/182 (34.62%), Postives = 87/182 (47.80%), Query Frame = -1 Query: 298 AYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 843 +YV NLN + E K LE ++ S +K + FNNA+Q WNH FFW I +DFGS QFGSGW W+VY + L ++KT NA P+V P+L DVWEHAYY+D++N+R DYI +F+ +++W+ V L Sbjct: 45 SYVQNLNNLLKDREELQKKDLEGIIKWS-SKNSEVTVFNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISQDFGSFEQFCEQFKQEALGQFGSGWVWVVYN------------------NNKLQIIKTSNADTPIVNLMKPILVCDVWEHAYYIDYRNKRSDYIDIFISHMINWKFVEDNL 207
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_RICPR (Superoxide dismutase [Mn/Fe] OS=Rickettsia prowazekii GN=sodB PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.262e-25 Identity = 63/182 (34.62%), Postives = 86/182 (47.25%), Query Frame = -1 Query: 298 AYVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 843 +YV NLN I E K LE+++ S ++ NNA+Q WNH FFW I +DFGS QFGSGW W+VY D L ++KT NA P+V P+L DVWEHAYY+D++N+R DYI +F+ +++W+ V L Sbjct: 45 SYVQNLNNLIKDREELQKKDLEEIIEWSSQNAEVA-ILNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISKDFGSFEQFCAQFKQEAVGQFGSGWTWVVYH------------------DNKLQIIKTSNAGTPIVNFMKPILACDVWEHAYYIDYRNKRSDYIDIFIRHMINWKFVEDNL 207 The following BLAST results are available for this feature:
BLAST of CB290252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290252 ID=CB290252; Name=CB290252; organism=Citrus sinensis; type=EST; length=843bpback to top |