CB290252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM3_PLEBO (Superoxide dismutase [Mn] 3 (Fragment) OS=Plectonema boryanum GN=sodA3 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.002e-14 Identity = 56/191 (29.32%), Postives = 84/191 (43.98%), Query Frame = -1 Query: 289 YVDNLNKQIVGTELGDGKSLEDVVIASYNKG-DLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 840 YVDNLN T L D +L+++ I + + + +P NNA NH FW I + FG+ +FGSGW WLV L +V T N NP++ P++ DVWEHAYYL +QNRR DY++ + + +V+W +++R ++A Sbjct: 65 YVDNLN-----TALKDQPNLQNLSIEAMLRDLNAVPENIRNTIRNNAGGHLNHTIFWQIMSPDGGGQPTGAIAQAINQTFGNFESFRKQFNEAGGDRFGSGWVWLV-----------------RNAQGQLQIVSTANQDNPIMEGNYPIMGNDVWEHAYYLRYQNRRADYLNNWWN-VVNWNEINRRFQAA 232
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_BORBU (Superoxide dismutase [Fe] OS=Borrelia burgdorferi GN=sod PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.309e-14 Identity = 49/142 (34.51%), Postives = 62/142 (43.66%), Query Frame = -1 Query: 304 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 729 NNA NH ++ I FGS FGSGWAWLV + L V+ PN +PL+ Y P+L IDVWEHAYYL +QNRR +Y+ F+ K ++WE VSK Sbjct: 73 NNAGGYSNHTLYFRTLRPGNKDNLFEKFKDDINAAFGSLDVLKANLKDTAMKIFGSGWAWLVLCP-----------------ESGLKVISMPNQDSPLMNSYKPILGIDVWEHAYYLKYQNRRIEYVDAFL-KALNWEEVSK 196
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_THEAQ (Superoxide dismutase [Mn] OS=Thermus aquaticus GN=sodA PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14 Identity = 52/178 (29.21%), Postives = 75/178 (42.13%), Query Frame = -1 Query: 316 AYVDNLNKQIVGTELGDGKSLEDVVI-ASYNKGDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWE 843 AYV NLN + G +E ++ + D+ A NN NH FW I+ FG +FGSGWAWLV + L V+ T N NP++ ++P++ IDVWEHAYYL +QNRR DY+ + +++W+ Sbjct: 36 AYVTNLNAALEKYPYLQGAEVETLLRHLTALPADIQAAVRNNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFAALKEKLTQAAMGRFGSGWAWLV-----------------KDPFGKLHVISTANQDNPVMGGFAPIVGIDVWEHAYYLKYQNRRADYLQAIWN-VLNWD 195
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM1_PLEBO (Superoxide dismutase [Mn] 1 OS=Plectonema boryanum GN=sodA1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.485e-14 Identity = 48/150 (32.00%), Postives = 71/150 (47.33%), Query Frame = -1 Query: 286 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS--PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 729 NN NH FW I++ FGS A +FGSGWAWLV S++ L + T N NPL+ + + P+L DVWEHAYYL +QNRR +Y++ + + +V+W++V++R A+ Sbjct: 115 NNGGGHVNHTMFWQIMAPKAGGTPTGAVAKAIDQTFGSFDAFKQQFNKAGADRFGSGWAWLV-----------------SDRQGKLSITSTANQDNPLMSNPNAYPILGNDVWEHAYYLKYQNRRAEYLTNWWN-VVNWQAVNQRYAQAQ 246
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_STRP1 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M1 GN=sodA PE=3 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13 Identity = 47/148 (31.76%), Postives = 65/148 (43.92%), Query Frame = -1 Query: 286 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 729 NN NH FW I+ FGS +FGSGWAWLV K+ L + T N P+ P+L +DVWEHAYYL+++N RP+YI F + +V+W+ VS+ ++AK Sbjct: 73 NNGGGHLNHALFWELLSPEKQDVTPDVAQA-IDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVN-----------------KEGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNYIKAFFE-IVNWKKVSELYQAAK 201
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_STRMU (Superoxide dismutase [Mn/Fe] OS=Streptococcus mutans GN=sodA PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13 Identity = 45/142 (31.69%), Postives = 63/142 (44.37%), Query Frame = -1 Query: 304 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSK 729 NN NH FW + E FGS T+FGSGWAWLV +K+ L V T N P+ P+L +DVWEHAYYL+++N RP+YI F + +++W +V++ Sbjct: 73 NNGGGHLNHALFWELLSPEKTKVTAEVAAAINEA-FGSFDDFKAAFTAAATTRFGSGWAWLVV-----------------DKEGKLEVTSTANQDTPISQGLKPILALDVWEHAYYLNYRNVRPNYIKAFFE-VINWNTVAR 195
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM2_BACAN (Superoxide dismutase [Mn] 2 OS=Bacillus anthracis GN=sodA2 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.108e-13 Identity = 52/182 (28.57%), Postives = 80/182 (43.96%), Query Frame = -1 Query: 301 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 840 YV+NLN + KSLE+++ + + K + NN + H FW +I+ F + ++FGSG+ WLV + L V+ TPN PL PLL IDVWEHAYYL +QNRRP++++ + V+W+ V+++ Sbjct: 36 YVNNLNAALENYSELHNKSLEELLCNLETLPKEIVTAVRNNGGGHYCHSLFWEVMSPRGGGEPNGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYGWLVLDG------------------EELSVMSTPNQDTPLQEGKIPLLVIDVWEHAYYLKYQNRRPEFVTNWW-HTVNWDRVNEK 198
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_STRP8 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M18 GN=sodA PE=3 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13 Identity = 46/148 (31.08%), Postives = 65/148 (43.92%), Query Frame = -1 Query: 286 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 729 NN NH FW I+ FGS +FGSGWAWLV K+ L + T N P+ P+L +DVWEHAYYL+++N RP+YI F + +++W+ VS+ ++AK Sbjct: 73 NNGGGHLNHALFWELLSPEKQDVTPDVAQA-IDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVN-----------------KEGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNYIKAFFE-IINWKKVSELYQAAK 201
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_STRP6 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M6 GN=sodA PE=3 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13 Identity = 46/148 (31.08%), Postives = 65/148 (43.92%), Query Frame = -1 Query: 286 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 729 NN NH FW I+ FGS +FGSGWAWLV K+ L + T N P+ P+L +DVWEHAYYL+++N RP+YI F + +++W+ VS+ ++AK Sbjct: 73 NNGGGHLNHALFWELLSPEKQDITPDVAQA-IDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVN-----------------KEGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNYIKAFFE-IINWKKVSELYQAAK 201
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_STRP3 (Superoxide dismutase [Mn] OS=Streptococcus pyogenes serotype M3 GN=sodA PE=3 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.447e-13 Identity = 46/148 (31.08%), Postives = 65/148 (43.92%), Query Frame = -1 Query: 286 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 729 NN NH FW I+ FGS +FGSGWAWLV K+ L + T N P+ P+L +DVWEHAYYL+++N RP+YI F + +++W+ VS+ ++AK Sbjct: 73 NNGGGHLNHALFWELLSPEKQDVTSDVAQA-IDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVN-----------------KEGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNYIKAFFE-IINWKKVSELYQAAK 201 The following BLAST results are available for this feature:
BLAST of CB290252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290252 ID=CB290252; Name=CB290252; organism=Citrus sinensis; type=EST; length=843bpback to top |