CB290252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_MACFA (Superoxide dismutase [Mn], mitochondrial OS=Macaca fascicularis GN=SOD2 PE=2 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.769e-11 Identity = 58/195 (29.74%), Postives = 79/195 (40.51%), Query Frame = -1 Query: 286 AYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPL--VWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 843 AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + +++ L + PN +PL PLL IDVWEHAYYL ++N RPDY+ + +++WE+V++R + K Sbjct: 57 AYVNNLNVT------------EEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFEKFKEKLTAASVGVQGSGWGWLGF----------------NKERGQLQIAACPNQ-DPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTERYMACK 221
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_PONPY (Superoxide dismutase [Mn], mitochondrial OS=Pongo pygmaeus GN=SOD2 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 2.311e-11 Identity = 58/195 (29.74%), Postives = 79/195 (40.51%), Query Frame = -1 Query: 286 AYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPL--VWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 843 AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + +++ L + PN +PL PLL IDVWEHAYYL ++N RPDY+ + +++WE+V++R + K Sbjct: 57 AYVNNLNVT------------EEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGF----------------NKERGHLQIAACPNQ-DPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTERYMACK 221
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_PANTR (Superoxide dismutase [Mn], mitochondrial OS=Pan troglodytes GN=SOD2 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.311e-11 Identity = 58/195 (29.74%), Postives = 79/195 (40.51%), Query Frame = -1 Query: 286 AYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPL--VWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 843 AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + +++ L + PN +PL PLL IDVWEHAYYL ++N RPDY+ + +++WE+V++R + K Sbjct: 33 AYVNNLNVT------------EEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGF----------------NKERGHLQIAACPNQ-DPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTERYMACK 197
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_HYLLA (Superoxide dismutase [Mn], mitochondrial OS=Hylobates lar GN=SOD2 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.311e-11 Identity = 58/195 (29.74%), Postives = 79/195 (40.51%), Query Frame = -1 Query: 286 AYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPL--VWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 843 AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + +++ L + PN +PL PLL IDVWEHAYYL ++N RPDY+ + +++WE+V++R + K Sbjct: 33 AYVNNLNVT------------EEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTATSVGVQGSGWGWLGF----------------NKERGHLQIAACPNQ-DPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTERYMACK 197
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_HUMAN (Superoxide dismutase [Mn], mitochondrial OS=Homo sapiens GN=SOD2 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.311e-11 Identity = 58/195 (29.74%), Postives = 79/195 (40.51%), Query Frame = -1 Query: 286 AYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPL--VWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 843 AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + +++ L + PN +PL PLL IDVWEHAYYL ++N RPDY+ + +++WE+V++R + K Sbjct: 57 AYVNNLNVT------------EEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGF----------------NKERGHLQIAACPNQ-DPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTERYMACK 221
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_RAT (Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus GN=Sod2 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11 Identity = 54/183 (29.51%), Postives = 76/183 (41.53%), Query Frame = -1 Query: 301 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPL--VWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 840 YV+NLN + + + + DV + L PA N NH FW I+RDFGS GSGW WL + K++ L + + +PL PLL IDVWEHAYYL ++N RPDY+ + +++WE+VS+R Sbjct: 58 YVNNLN--VTEEKYHEALAKGDVT----TQVALQPALKFNGGGHINHSIFWTNLSPKGGGEPKGELLEAIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGFN-----------------KEQGRLQIAACSNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVSQR 216
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_MACNE (Superoxide dismutase [Mn], mitochondrial OS=Macaca nemestrina GN=SOD2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11 Identity = 57/195 (29.23%), Postives = 77/195 (39.49%), Query Frame = -1 Query: 286 AYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPL--VWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 843 AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + K++ L + +PL PLL IDVWEHAYYL ++N RPDY+ + +++WE+V++R + K Sbjct: 57 AYVNNLNVT------------EEKYQEALAKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFEKYKEKLTAASVGVQGSGWGWLGFN-----------------KERGQLQIAACLNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTERYMACK 221
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_BOVIN (Superoxide dismutase [Mn], mitochondrial OS=Bos taurus GN=SOD2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.018e-11 Identity = 56/190 (29.47%), Postives = 75/190 (39.47%), Query Frame = -1 Query: 301 AYVDNLNKQIVGTELGDGKSLEDVVIASYNKGD------LLPAFN-NAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPL--VWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR 843 AYV+NLN E+ + KGD L PA N NH FW I+RDFGS GSGW WL + K++ L + + +PL PLL IDVWEHAYYL ++N RPDY+ + +++WE+V+ R Sbjct: 57 AYVNNLNVA------------EEKYREALEKGDVTAQIALQPALKFNGGGHINHSIFWTNLSPNGGGEPQGELLEAIKRDFGSFAKFKEKLTAVSVGVQGSGWGWLGFN-----------------KEQGRLQIAACSNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWN-VINWENVTAR 216 The following BLAST results are available for this feature:
BLAST of CB290252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290252 ID=CB290252; Name=CB290252; organism=Citrus sinensis; type=EST; length=843bpback to top |