CB290252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM1_BACAN (Superoxide dismutase [Mn] 1 OS=Bacillus anthracis GN=sodA1 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21 Identity = 69/191 (36.13%), Postives = 89/191 (46.60%), Query Frame = -1 Query: 286 YVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAF-----NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 Y+ NLN + G EL D KS+E++V N ++ A NN NH FFW IE FGS AT+FGSGWAWLV + L V TPN +PL +P++ +DVWEHAYYL++QNRRPDYI F + +V W + KR + AK Sbjct: 36 YITNLNAALEGHAELAD-KSVEELVA---NLNEVPEAIRTAVRNNGGGHANHTFFWTILSPNGGGQPVGELATAIEAKFGSFDAFKEEFAKAGATRFGSGWAWLVVN------------------NGELEVTSTPNQDSPLTEGKTPVIGLDVWEHAYYLNYQNRRPDYIGAFWN-VVDWNAAEKRYQEAK 203
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_DEIRA (Superoxide dismutase [Mn] OS=Deinococcus radiodurans GN=sodA PE=1 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 4.201e-21 Identity = 73/200 (36.50%), Postives = 94/200 (47.00%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV-----IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXG----LIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDY------SPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YVDN NK + GTE D +E ++ + + KG L NNA NH FW G I FGS T+FGSGWAWLV K D L VV T N NPL+ + +P+L +DVWEHAYYL++QNRRPDY++ F + +V+W+ VSKR +AK Sbjct: 35 YVDNANKALEGTEFAD-LPVEQLIQQLDRVPADKKGALR---NNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAWLVVK------------------DGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWN-VVNWDEVSKRYAAAK 211
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_STACA (Superoxide dismutase [Mn/Fe] OS=Staphylococcus carnosus GN=sodA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.166e-21 Identity = 66/186 (35.48%), Postives = 88/186 (47.31%), Query Frame = -1 Query: 289 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 840 YV LN I GT+L + KS+E++V + S NN NH FW I+ ++GS A QFGSGWAWLV +KD L +V TPN NP+ +P+L +DVWEHAYYL +QN+RPDYI F + +V+W V + E+A Sbjct: 35 YVTKLNAAIEGTDL-ENKSIEEIVANLDSVPSDIQTAVRNNGGGHLNHSLFWQLLTPNSEEKGTVIDK--IKEEWGSLDKFKDEFAKKAAGQFGSGWAWLVV-----------------DKDGKLEIVSTPNQDNPITEGKTPILGLDVWEHAYYLKYQNKRPDYIDAFWN-VVNWNKVDELYEAA 199
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_HELPY (Superoxide dismutase [Fe] OS=Helicobacter pylori GN=sodB PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.222e-20 Identity = 66/185 (35.68%), Postives = 88/185 (47.57%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV+NLN I GT+ + SL D++ S FNNAAQ +NHDF+W L E+DFGS T FGSGW W Y L ++K + +++T NA P+ PLL +DVWEHAYY+D +N RP Y+ F ++W VS+ E AK Sbjct: 34 YVNNLNNLIKGTDF-EKSSLFDILTKSSGG-----VFNNAAQIYNHDFYWDCLSPKATALSDELKGAL-EKDFGSLEKFKEDFIKSATTLFGSGWNWAAYN-------------LDTQK---IEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGH-INWHFVSQCYEWAK 194
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_CAMJJ (Superoxide dismutase [Fe] OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=sodB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 68/191 (35.60%), Postives = 88/191 (46.07%), Query Frame = -1 Query: 289 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGL-------IERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 840 YV NLN I TE GK L ++ S N G FNNAAQ +NHDF++ + +E++FGS FGSGW WLVY + K++ L V T NA P+ D PLL +DVWEHAYY+D +N RP Y+ F ++WE V+K E A Sbjct: 34 YVTNLNNLIKDTEFA-GKDLVSIIKTS-NGG----VFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVY----------------NTKNQKLEFVGTSNAATPITEDKVPLLVVDVWEHAYYVDHRNARPAYLEKFYAH-INWEFVAKAYEWA 201
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_CAMJE (Superoxide dismutase [Fe] OS=Campylobacter jejuni GN=sodB PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20 Identity = 68/191 (35.60%), Postives = 88/191 (46.07%), Query Frame = -1 Query: 289 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGL-------IERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 840 YV NLN I TE GK L ++ S N G FNNAAQ +NHDF++ + +E++FGS FGSGW WLVY + K++ L V T NA P+ D PLL +DVWEHAYY+D +N RP Y+ F ++WE V+K E A Sbjct: 34 YVTNLNNLIKDTEFA-GKDLVSIIKTS-NGG----VFNNAAQVYNHDFYFDCIKPSTGCGCGGSCQSIDANLQAALEKEFGSLENFKAEFIKGATGVFGSGWFWLVY----------------NTKNQKLEFVGTSNAATPITEDKVPLLVVDVWEHAYYVDHRNARPAYLEKFYAH-INWEFVAKAYEWA 201
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_BACHD (Superoxide dismutase [Mn] OS=Bacillus halodurans GN=sodA PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20 Identity = 64/187 (34.22%), Postives = 84/187 (44.92%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN + G KS+E +V + + + NN NH FW I +FGS A +FGSGWAWLV D L + TPN PL+ +P+L +DVWEHAYYL++QNRRPDYIS F + +V+W+ V+KR AK Sbjct: 35 YVTKLNAALEGHSALAEKSIEALVSDLDAVPENIRTAVRNNGGGHANHTLFWQILSPNGGGAPTGELADAINAEFGSFDQFKEKFADAAANRFGSGWAWLVVN------------------DGKLEITSTPNQDTPLMEGKTPILGLDVWEHAYYLNYQNRRPDYISAFWN-VVNWDEVAKRYNEAK 202
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_STAS1 (Superoxide dismutase [Mn/Fe] OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=sodA PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.723e-20 Identity = 65/187 (34.76%), Postives = 89/187 (47.59%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN + GT+L + KS+E++V + S + NN NH FW I+ +GS A +FGSGWAWLV + +L +V TPN NPL +P+L +DVWEHAYYL +QN+RPDYIS F + +V+WE V + +AK Sbjct: 35 YVTKLNAAVEGTDL-ESKSIEEIVANLDSVPENIQTAVRNNGGGHLNHSLFWELLTPNSEEKGTVVDK--IKEQWGSLDAFKEEFADKAAARFGSGWAWLVVN------------------NGNLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYISAFWN-VVNWEKVDELYNAAK 199
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_BACCA (Superoxide dismutase [Mn] OS=Bacillus caldotenax GN=sodA PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.723e-20 Identity = 62/188 (32.98%), Postives = 87/188 (46.28%), Query Frame = -1 Query: 283 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 840 YV NLN + G KSLE+++ + + + NN NH FW I + FGS A +FGSGWAWLV + L + TPN +P++ +P+L +DVWEHAYYL +QNRRP+YI+ F + +V+W+ V+KR AKA Sbjct: 35 YVTNLNAALEGHPDLQNKSLEELLSNLEALPESIRTAVRNNGGGHANHSLFWTILSPNGGGEPTGELAEAINKKFGSFTAFKDEFSKAAAGRFGSGWAWLVVN------------------NGELEITSTPNQDSPIMEGKTPILGLDVWEHAYYLKYQNRRPEYIAAFWN-IVNWDEVAKRYSEAKA 203
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_BACST (Superoxide dismutase [Mn] OS=Bacillus stearothermophilus GN=sodA PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.557e-20 Identity = 62/188 (32.98%), Postives = 87/188 (46.28%), Query Frame = -1 Query: 283 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 840 YV NLN + G KSLE+++ + + + NN NH FW I + FGS A +FGSGWAWLV + L + TPN +P++ +P+L +DVWEHAYYL +QNRRP+YI+ F + +V+W+ V+KR AKA Sbjct: 35 YVTNLNAALEGHPDLQNKSLEELLSNLEALPESIRTAVRNNGGGHANHSLFWTILSPNGGGEPTGELADAINKKFGSFTAFKDEFSKAAAGRFGSGWAWLVVN------------------NGELEITSTPNQDSPIMEGKTPILGLDVWEHAYYLKYQNRRPEYIAAFWN-VVNWDEVAKRYSEAKA 203 The following BLAST results are available for this feature:
BLAST of CB290252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290252 ID=CB290252; Name=CB290252; organism=Citrus sinensis; type=EST; length=843bpback to top |