CB290252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM1_STAA3 (Superoxide dismutase [Mn/Fe] 1 OS=Staphylococcus aureus (strain USA300) GN=sodA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19 Identity = 63/187 (33.69%), Postives = 85/187 (45.45%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN + GT+L + KS+E++V + S NN NH FW I+ +GS A +FGSGWAWLV + L +V TPN NPL +P+L +DVWEHAYYL +QN+RPDYI F + +V+WE V + + K Sbjct: 35 YVTKLNAAVEGTDL-ESKSIEEIVANLDSVPANIQTAVRNNGGGHLNHSLFWELLSPNSEEKGTVVEK--IKEQWGSLEEFKKEFADKAAARFGSGWAWLVVN------------------NGQLEIVTTPNQDNPLTEGKTPILGLDVWEHAYYLKYQNKRPDYIGAFWN-VVNWEKVDELYNATK 199
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_METJ (Superoxide dismutase [Mn/Fe] OS=Methylomonas J GN=sodB PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.136e-19 Identity = 62/192 (32.29%), Postives = 84/192 (43.75%), Query Frame = -1 Query: 283 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLP------AFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 840 Y++N+N + GT + + V A K D LP NN NH FW I+ D G T+FGSGWAWL +K L+V T N +PL +P+L +DVWEHAYYL +QNRRP+YI F + +V+W+ VS+R + A A Sbjct: 34 YINNVNAALEGTSFAN-----EPVEALLQKLDSLPENLRGPVRNNGGGHANHSLFWKVLTPNGGGEPKGALADAIKSDIGGLDTFKEAFTKAALTRFGSGWAWLSVTP-----------------EKKLVVESTGNQDSPLSTGNTPILGLDVWEHAYYLKYQNRRPEYIGAFFN-VVNWDEVSRRYQEALA 202
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_HAEIN (Superoxide dismutase [Mn] OS=Haemophilus influenzae GN=sodA PE=1 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19 Identity = 72/199 (36.18%), Postives = 91/199 (45.73%), Query Frame = -1 Query: 283 AYVDNLNKQIVG-----TELGDGKSLEDV-VIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVW------DYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 843 AYV+N N + G E+ G + ++ I + +G L NNA NH FW IERDFGS AT+FGSGWAWLV + L VV T N NPL+ + PLL +DVWEHAYYL FQNRRPDYI F + +V+W+ V++R E A Sbjct: 34 AYVNNANAALEGLPAELVEMYPGHLISNLDKIPAEKRGALR---NNAGGHTNHSLFWKSLKKGTTLQGALKDA--IERDFGSVDAFKAEFEKAAATRFGSGWAWLVLTA-----------------EGKLAVVSTANQDNPLMGKEVAGCEGFPLLGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDFVAERFEQKTA 209
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_LISMO (Superoxide dismutase [Mn] OS=Listeria monocytogenes GN=sodA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 61/187 (32.62%), Postives = 85/187 (45.45%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN+ + G KS E++V + S + N+ NH FW IE +FG+ A +FGSGWAWLV D L +V T N +PL +P+L +DVWEHAYYL FQNRRP+YI F + +++W+ +KR ++AK Sbjct: 35 YVTKLNEAVAGHPELASKSAEELVTNLDSVPEDIRGAVRNHGGGHANHTLFWSILSPNGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVN------------------DGKLEIVSTANQDSPLSDGKTPVLGLDVWEHAYYLKFQNRRPEYIETFWN-VINWDEANKRFDAAK 202
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM2_STAAW (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain MW2) GN=sodM PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 60/187 (32.09%), Postives = 86/187 (45.99%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV D L +V TPN NPL +P+L DVWEHAYYL +QN+RPDY++ F + +V+W+ V + ++AK Sbjct: 35 YVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVN------------------DGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMTAFWN-IVNWKKVDELYQAAK 199
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM2_STAAS (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain MSSA476) GN=sodM PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 60/187 (32.09%), Postives = 86/187 (45.99%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV D L +V TPN NPL +P+L DVWEHAYYL +QN+RPDY++ F + +V+W+ V + ++AK Sbjct: 35 YVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVN------------------DGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMTAFWN-IVNWKKVDELYQAAK 199
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM2_STAAR (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain MRSA252) GN=sodM PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 60/187 (32.09%), Postives = 86/187 (45.99%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV D L +V TPN NPL +P+L DVWEHAYYL +QN+RPDY++ F + +V+W+ V + ++AK Sbjct: 35 YVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVN------------------DGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMTAFWN-IVNWKKVDELYQAAK 199
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM2_STAAN (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain N315) GN=sodM PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 60/187 (32.09%), Postives = 86/187 (45.99%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV D L +V TPN NPL +P+L DVWEHAYYL +QN+RPDY++ F + +V+W+ V + ++AK Sbjct: 35 YVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVN------------------DGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMTAFWN-IVNWKKVDELYQAAK 199
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM2_STAAM (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=sodM PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 60/187 (32.09%), Postives = 86/187 (45.99%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV D L +V TPN NPL +P+L DVWEHAYYL +QN+RPDY++ F + +V+W+ V + ++AK Sbjct: 35 YVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVN------------------DGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMTAFWN-IVNWKKVDELYQAAK 199
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM2_STAAC (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain COL) GN=sodM PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 60/187 (32.09%), Postives = 86/187 (45.99%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV D L +V TPN NPL +P+L DVWEHAYYL +QN+RPDY++ F + +V+W+ V + ++AK Sbjct: 35 YVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVN------------------DGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMTAFWN-IVNWKKVDELYQAAK 199 The following BLAST results are available for this feature:
BLAST of CB290252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290252 ID=CB290252; Name=CB290252; organism=Citrus sinensis; type=EST; length=843bpback to top |