CB290252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM2_STAA8 (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain NCTC 8325) GN=sodM PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 60/187 (32.09%), Postives = 86/187 (45.99%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV D L +V TPN NPL +P+L DVWEHAYYL +QN+RPDY++ F + +V+W+ V + ++AK Sbjct: 35 YVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVN------------------DGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMTAFWN-IVNWKKVDELYQAAK 199
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM2_STAA3 (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain USA300) GN=sodM PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 60/187 (32.09%), Postives = 86/187 (45.99%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV D L +V TPN NPL +P+L DVWEHAYYL +QN+RPDY++ F + +V+W+ V + ++AK Sbjct: 35 YVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVN------------------DGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMTAFWN-IVNWKKVDELYQAAK 199
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_PLAVI (Superoxide dismutase [Fe] OS=Plasmodium vivax GN=SODB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 59/185 (31.89%), Postives = 84/185 (45.41%), Query Frame = -1 Query: 289 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS-PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 840 YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL + L++++T +A NP+ + P+LT D+WEHAYY+D++N R Y+ + + LV+W ++ L+ A Sbjct: 35 YVNKLNTLIKDTPFAE-KSLLDIVKESSGA-----IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALN-----------------NNNKLVILQTHDAGNPIKDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN-LVNWNFANENLKKA 195
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_PLAFX (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate HB3) GN=SODB PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 59/185 (31.89%), Postives = 84/185 (45.41%), Query Frame = -1 Query: 289 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS-PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 840 YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL + L++++T +A NP+ + P+LT D+WEHAYY+D++N R Y+ + + LV+W ++ L+ A Sbjct: 35 YVNKLNTLIKDTPFAE-KSLLDIVKESSGA-----IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALN-----------------NNNKLVILQTHDAGNPIKDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN-LVNWNFANENLKKA 195
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_PLAFA (Superoxide dismutase [Fe] OS=Plasmodium falciparum GN=SODB PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 59/185 (31.89%), Postives = 84/185 (45.41%), Query Frame = -1 Query: 289 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS-PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 840 YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL + L++++T +A NP+ + P+LT D+WEHAYY+D++N R Y+ + + LV+W ++ L+ A Sbjct: 35 YVNKLNTLIKDTPFAE-KSLLDIVKESSGA-----IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALN-----------------NNNKLVILQTHDAGNPIKDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN-LVNWNFANENLKKA 195
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_PLAF7 (Superoxide dismutase [Fe] OS=Plasmodium falciparum (isolate 3D7) GN=SODB PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18 Identity = 59/185 (31.89%), Postives = 84/185 (45.41%), Query Frame = -1 Query: 289 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS-PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 840 YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL + L++++T +A NP+ + P+LT D+WEHAYY+D++N R Y+ + + LV+W ++ L+ A Sbjct: 35 YVNKLNTLIKDTPFAE-KSLLDIVKESSGA-----IFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALN-----------------NNNKLVILQTHDAGNPIKDNTGIPILTCDIWEHAYYIDYRNDRASYVKAWWN-LVNWNFANENLKKA 195
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_ENTHI (Superoxide dismutase [Fe] OS=Entamoeba histolytica GN=SODB PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.549e-18 Identity = 60/181 (33.15%), Postives = 84/181 (46.41%), Query Frame = -1 Query: 298 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRL 840 YV+ LN + GTE + K+LE+++ + +NNAAQAWNH F+W L FG FGSGW WLV E D L ++ T +AVNP+ PLLT DVWEHAYY+D +N R Y+ + + +V+W+ V ++L Sbjct: 35 YVNKLNGLVKGTEQ-EHKTLEELIKQKPTQA----IYNNAAQAWNHAFYWKCMCGCGVKPSEQLIAKLTAA-FGGLEEFKKKFTEKAVGHFGSGWCWLV------------------EHDGKLEIIDTHDAVNPMTNGMKPLLTCDVWEHAYYIDTRNNRAAYLEHWWN-VVNWKFVEEQL 190
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM2_STAAB (Superoxide dismutase [Mn/Fe] 2 OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=sodM PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.348e-18 Identity = 59/187 (31.55%), Postives = 86/187 (45.99%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN + GTEL + +SL D++ + + + NN +NH FW I+ +G+ T FGSGW WLV + L +V TPN NPL +P+L DVWEHAYYL +QN+RPDY++ F + +V+W+ V + ++AK Sbjct: 35 YVTKLNATVEGTEL-EHQSLADMIANLDKVPEAMRMSVRNNGGGHFNHSLFWEILSPNSEEKGGVIDD--IKAQWGTLDEFKNEFANKATTLFGSGWTWLVVN------------------NGKLEIVTTPNQDNPLTEGKTPILLFDVWEHAYYLKYQNKRPDYMTAFWN-IVNWKKVDELYQAAK 199
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM2_PLEBO (Superoxide dismutase [Mn] 2 OS=Plectonema boryanum GN=sodA2 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.348e-18 Identity = 56/187 (29.95%), Postives = 85/187 (45.45%), Query Frame = -1 Query: 289 AYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 843 AYV+NLN I S+ED+V + + NNA NH FW I FGS +FGSGW WLV + L ++ TPN +PL+ ++P++ DVWEHAYYL +QNRRP+Y++ + + +++WE +++R ++A Sbjct: 34 AYVNNLNAAIEKYSDLQSMSVEDLVTHLDRVPEDVRTTVRNNAGGHVNHTMFWEIMGANGSGAPTGAISEAINNSFGSFDAFKQQFNDAGTKRFGSGWVWLV-----------------RSQQGDLQILSTPNQDSPLIEGHTPIMGNDVWEHAYYLKYQNRRPEYLNAWWN-VLNWEEINRRFDAA 202
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_YEREN (Superoxide dismutase [Mn] OS=Yersinia enterocolitica GN=sodA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.678e-18 Identity = 59/154 (38.31%), Postives = 71/154 (46.10%), Query Frame = -1 Query: 286 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 729 NNA NH FW IERDFGS AT+FGSGWAWLV K D L VV T N +PL+ + P++ +DVWEHAYYL FQNRRPDYI F + +V+W+ + R AK Sbjct: 74 NNAGGHANHSLFWKGLKLGTTLTGDLKAA--IERDFGSVDSFKEKFEAAAATRFGSGWAWLVLKD-----------------DGKLAVVSTANQDSPLMGEAVSGASGFPIVGLDVWEHAYYLKFQNRRPDYIKAFWN-VVNWDEAAARFAQAK 207 The following BLAST results are available for this feature:
BLAST of CB290252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290252 ID=CB290252; Name=CB290252; organism=Citrus sinensis; type=EST; length=843bpback to top |