CB290252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_ACIAD (Superoxide dismutase [Mn] OS=Acinetobacter sp. (strain ADP1) GN=sodA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 7.416e-18 Identity = 71/193 (36.79%), Postives = 86/193 (44.56%), Query Frame = -1 Query: 289 AYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGL-IERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS-----PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 843 AYVDNLN QI D L + I+ YN NN +NH FFW I +DFGS + +FGSGWAWL+ P+ K L V TPN NPL+ D S PLL +DVWEHAYYL +QNRR DYI F +V+W V++R A Sbjct: 56 AYVDNLNAQIKTYPELDKTDLIQLQKQISKYNTA----VRNNGGGHFNHTFFWESLAATNKTGQPSPALVKQITQDFGSLDAFKQKFNEAASGRFGSGWAWLIVT--------------PNGK---LAVTSTPNQDNPLM-DLSETKGTPLLGLDVWEHAYYLKYQNRRADYIKAFW-SVVNWNKVNERYNEA 225
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_CHLRE (Superoxide dismutase [Mn], mitochondrial OS=Chlamydomonas reinhardtii GN=SODA PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17 Identity = 69/202 (34.16%), Postives = 90/202 (44.55%), Query Frame = -1 Query: 283 YVDNLNKQIVGTELGDGKSLEDVVIASYNKG---DLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGL-IERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 840 YV+NLN L L+D+ + NK D LP NN +NH FFW IE FGS A +FGSGWAWL K D SL + TPN NPL+ PLL +DVWEHAYYL +QNRRP+YI+ + + +V+WE V++ ++A+A Sbjct: 35 YVNNLN-----AALDKFPELKDLGLVDLNKAVGTDKLPKDVATVIRNNGGGHYNHSFFWKVMTNPSNTNGPNGDVKAAIEASFGSVDEMKAKFNAAAAGRFGSGWAWLSVKP-----------------DGSLSIDSTPNQDNPLMTALPDVAGGIPLLGLDVWEHAYYLKYQNRRPEYIAAWWN-VVNWEQVAENYKAAQA 213
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODF_PLAMA (Superoxide dismutase [Fe] OS=Plasmodium malariae GN=SODB PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17 Identity = 58/185 (31.35%), Postives = 83/185 (44.86%), Query Frame = -1 Query: 289 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS-PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 840 YV+ LN I T + KSL D+V S FNNAAQ WNH F+W I+ DFGS FGSGW WL + L++++T +A NP+ + P+LT D+WEHAY +D++N R Y+ + + LV+W ++ L+ A Sbjct: 35 YVNKLNTLIKDTPFAE-KSLLDIVKESSGA-----IFNNAAQIWNHTFYWDSMGPDCGGEPHGGIKEKIQEDFGSFNNFKEQFSNILCGHFGSGWGWLALN-----------------NNNKLVILQTHDAGNPIKDNTGIPILTCDIWEHAYCIDYRNDRASYVKAWWN-LVNWNFANENLKKA 195
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_LISIN (Superoxide dismutase [Mn] OS=Listeria innocua GN=sodA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17 Identity = 60/187 (32.09%), Postives = 85/187 (45.45%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN+ + G K +E++V + S + N+ NH FW IE +FG+ A +FGSGWAWLV + L +V T N +PL +P+L +DVWEHAYYL FQNRRP+YI F + +V+W+ +KR ++AK Sbjct: 35 YVTKLNEAVSGHPELAEKPVEELVANLDSVPEDIRGAVRNHGGGHANHTLFWSILSPNGGGAPTGDLKSAIESEFGTFDDFKEKFNAAAAARFGSGWAWLVVN------------------NGKLEIVSTANQDSPLSDGKTPVLGLDVWEHAYYLKFQNRRPEYIDTFWN-VVNWDEANKRFDAAK 202
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_ENTFA (Superoxide dismutase [Fe] OS=Enterococcus faecalis GN=sodA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.158e-17 Identity = 65/189 (34.39%), Postives = 89/189 (47.09%), Query Frame = -1 Query: 286 YVDNLNKQIVG-TELGDGKSLEDVVIASYNK--GDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV NLN I ELG+ KS+E++ I+ N D+ A NN NH FFW I+ FGS +FGSGWAWLV + L + TPN +PL+ +P+L +DVWEHAYYL ++N RPDYI F + +V+W+ V++ +AK Sbjct: 35 YVTNLNAAIEKHPELGE-KSVENL-ISDMNAIPEDIRTAVRNNGGGHANHTFFWEIMAPNAGGQPTGAIKEAIDETFGSFDEMKAAFKTAATGRFGSGWAWLVVN------------------NGKLEITSTPNQDSPLMDGQTPVLGLDVWEHAYYLKYKNVRPDYIEAFWN-VVNWDKVNELFAAAK 202
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_SALTY (Superoxide dismutase [Mn] OS=Salmonella typhimurium GN=sodA PE=3 SV=3) HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17 Identity = 69/197 (35.03%), Postives = 88/197 (44.67%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV+N N + +E+++ K D +PA NNA NH FW IERDFGS AT+FGSGWAWLV K DK L VV T N +PL+ + P+L +DVWEHAYYL FQNRRPDYI F + +V+W+ + R + K Sbjct: 35 YVNNANAALENLPEFASLPVEELI----TKLDQVPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA--IERDFGSVDNFKAEFEKAAATRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAAKK 206
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_PSEAE (Superoxide dismutase [Mn] OS=Pseudomonas aeruginosa GN=sodA PE=3 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17 Identity = 58/188 (30.85%), Postives = 82/188 (43.62%), Query Frame = -1 Query: 283 YVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 840 YV+NLN + GT + + +E ++ +A + P NN NH FW I+ G T+FGSGWAWL SLLV + N +PL+ +P+L +DVWEHAYYL +QNRRP+YI F + ++ W V++R A A Sbjct: 35 YVNNLNAALEGTPYAE-QPVESLLRQLAGLPEKLRTPVVNNGGGHANHSLFWTVMSPQGGGRPDGDLGRAIDEQLGGFEAFKDAFTKAALTRFGSGWAWLSVTPQG-----------------SLLVESSGNQDSPLMNGNTPILGLDVWEHAYYLKYQNRRPEYIGAFYN-VIDWREVARRYAQALA 203
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_SHIFL (Superoxide dismutase [Mn] OS=Shigella flexneri GN=sodA PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17 Identity = 69/197 (35.03%), Postives = 88/197 (44.67%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV+N N + +E+++ K D LPA NNA NH FW IERDFGS A++FGSGWAWLV K DK L VV T N +PL+ + P+L +DVWEHAYYL FQNRRPDYI F + +V+W+ + R + K Sbjct: 35 YVNNANAALESLPEFANLPVEELI----TKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA--IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAAKK 206
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_SALTI (Superoxide dismutase [Mn] OS=Salmonella typhi GN=sodA PE=3 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17 Identity = 69/197 (35.03%), Postives = 88/197 (44.67%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV+N N + +E+++ K D +PA NNA NH FW IERDFGS AT+FGSGWAWLV K DK L VV T N +PL+ + P+L +DVWEHAYYL FQNRRPDYI F + +V+W+ + R + K Sbjct: 35 YVNNANAALENLPEFADLPVEELI----TKLDQVPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA--IERDFGSVDNFKAEFEKAAATRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAAKK 206
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_ECO57 (Superoxide dismutase [Mn] OS=Escherichia coli O157:H7 GN=sodA PE=3 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 3.681e-17 Identity = 69/197 (35.03%), Postives = 88/197 (44.67%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV+N N + +E+++ K D LPA NNA NH FW IERDFGS A++FGSGWAWLV K DK L VV T N +PL+ + P+L +DVWEHAYYL FQNRRPDYI F + +V+W+ + R + K Sbjct: 35 YVNNANAALESLPEFANLPVEELI----TKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA--IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPILGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAAKK 206 The following BLAST results are available for this feature:
BLAST of CB290252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290252 ID=CB290252; Name=CB290252; organism=Citrus sinensis; type=EST; length=843bpback to top |