CB290252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_ECOLI (Superoxide dismutase [Mn] OS=Escherichia coli (strain K12) GN=sodA PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 6.278e-17 Identity = 68/197 (34.52%), Postives = 88/197 (44.67%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLLPAF------NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV+N N + +E+++ K D LPA NNA NH FW IERDFGS A++FGSGWAWLV K DK L VV T N +PL+ + P++ +DVWEHAYYL FQNRRPDYI F + +V+W+ + R + K Sbjct: 35 YVNNANAALESLPEFANLPVEELI----TKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA--IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKG-----------------DK-LAVVSTANQDSPLMGEAISGASGFPIMGLDVWEHAYYLKFQNRRPDYIKEFWN-VVNWDEAAARFAAKK 206
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_PASMU (Superoxide dismutase [Mn] OS=Pasteurella multocida GN=sodA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.199e-17 Identity = 67/191 (35.08%), Postives = 86/191 (45.03%), Query Frame = -1 Query: 295 AYVDNLNKQIVGT-ELGDGKSLEDVVIASYNKGDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVW------DYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLE 843 AYV+N N + EL G + + + D L A NN NH FW I RDFGS AT+FGSGWAWLV +++ L VV T N +P++ + PLL +DVWEHAYYL FQNRRPDYI F +V+W+ V++R E Sbjct: 34 AYVNNANAALENLPELAQGCPGQLLTKLAEVPADKLTAIRNNVGGHLNHSLFWKSLKKGTTLQGALKDA--IVRDFGSVEAFQAEFEKAAATRFGSGWAWLVL-----------------QENGKLAVVSTANQDSPVMGKAIAGCEGYPLLGLDVWEHAYYLKFQNRRPDYIKEFW-HVVNWDFVAERFE 204
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_LISIV (Superoxide dismutase [Mn] OS=Listeria ivanovii GN=sodA PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.071e-16 Identity = 60/187 (32.09%), Postives = 82/187 (43.85%), Query Frame = -1 Query: 286 YVDNLNKQIVG-TELGDGKSLEDVVIASYNKGDLLPAFNNAAQAW-NHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV LN+ + G EL E V ++ A N NH FW IE +FG+ A +FGSGWAWLV + L +V T N +PL +P+L +DVWEHAYYL FQNRRP+YI F + +++W+ +KR ++AK Sbjct: 35 YVTKLNEAVSGHAELASKPGEELVANLDSVPEEIRGAVRNHGGGHANHTLFWSSLSPNGGGAPTGNLKAAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVN------------------NGKLEIVSTANQDSPLSEGKTPVLGLDVWEHAYYLKFQNRRPEYIDTFWN-VINWDERNKRFDAAK 202
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_LACLM (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=sodA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.069e-16 Identity = 63/190 (33.16%), Postives = 84/190 (44.21%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVVI-ASYNKGDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGL---IERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV+NLN I D SLE+++ S D+ A NN NH FW + I ++FGS +FGSGWAWLV ++ L VV T N NP+ +P+L +DVWEHAYYL + N RPDYI F + LV+W+ V++ AK Sbjct: 35 YVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVV-----------------DEAGKLKVVSTANQDNPISEGLTPVLGLDVWEHAYYLKYHNVRPDYIEAFFN-LVNWDKVNELYAKAK 206
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_LACLA (Superoxide dismutase [Mn] OS=Lactococcus lactis subsp. lactis GN=sodA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 4.069e-16 Identity = 63/190 (33.16%), Postives = 84/190 (44.21%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVVI-ASYNKGDLLPAF-NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGL---IERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAK 840 YV+NLN I D SLE+++ S D+ A NN NH FW + I ++FGS +FGSGWAWLV ++ L VV T N NP+ +P+L +DVWEHAYYL + N RPDYI F + LV+W+ V++ AK Sbjct: 35 YVNNLNAAIEKHNELDDLSLEELLTDLSAIPEDIRTAVRNNGGGHLNHSQFWLWLRPNTDGSENHADGEIGDAIAKEFGSFETFKTEFKAAATGRFGSGWAWLVV-----------------DEAGKLKVVSTANQDNPISEGLTPVLGLDVWEHAYYLKYHNVRPDYIEAFFN-LVNWDKVNELYAKAK 206
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_HAEDU (Superoxide dismutase [Mn] OS=Haemophilus ducreyi GN=sodA PE=3 SV=4) HSP 1 Score: 85.5001 bits (210), Expect = 4.069e-16 Identity = 65/197 (32.99%), Postives = 85/197 (43.15%), Query Frame = -1 Query: 283 AYVDNLN----KQIVGTELGDGKSLEDVVIASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVW------DYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 843 AYV+N N K E G L+D+ K + NN NH FW + RDFGS AT+FGSGWAWLV + + L VV T N +P++ P+ T+DVWEHAYYL +QNRRPDYI F + +V+W+ S+R E +A Sbjct: 34 AYVNNSNALLEKHPELLEKCPGALLKDLTQVPAEKRTAVR--NNLGGHVNHTLFWKGLKTGTTLQGALKDAII--RDFGSVEAFQAEFEQAAATRFGSGWAWLVLE------------------EGKLAVVSTANQDSPIMGKDVAGVSGYPIFTLDVWEHAYYLHYQNRRPDYIKAFWN-VVNWDEASRRFEEKQA 207
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_PASHA (Superoxide dismutase [Mn] OS=Pasteurella haemolytica GN=sodA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.315e-16 Identity = 54/155 (34.84%), Postives = 69/155 (44.52%), Query Frame = -1 Query: 283 NNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYS------PLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESAKA 729 NN NH FW IERDFGS T+ GSGWAWLV + + L VV T N NPL+ P+L +DVWEHAYYL++QNRRPD+I F + +V+W+ ++R E A Sbjct: 74 NNVGGHVNHTLFWKGLKTGTTLQGALKEA--IERDFGSVEAFQSEFEKAATTRVGSGWAWLVLE------------------EGKLAVVSTANQDNPLMGKEVAGVSGYPILVLDVWEHAYYLNYQNRRPDFIKAFWN-VVNWDEAARRFEEKVA 207
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_PSEPU (Superoxide dismutase [Mn] OS=Pseudomonas putida GN=sodA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.499e-15 Identity = 58/188 (30.85%), Postives = 81/188 (43.09%), Query Frame = -1 Query: 286 YVDNLNKQIVGTELGDGKSLEDVVIASYNKGDLL--PAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKR-LESAK 840 YV+ LN I GTE + +E +V A + L N+ NH FW I G T+FGSGWAWL K+L+V + N +PL++ +P+ +DVWEHAYYL +QNRRP+YI F + ++ W V +R LE+ K Sbjct: 35 YVNGLNAAIEGTEWAEWP-VEKLVGAVKQLPESLRGAVTNHGGGHANHSLFWTVMSPQGGGEPHGQLAQAIASQLGGFDAFKEAFTKAALTRFGSGWAWLSVTP-----------------QKTLVVESSGNQDSPLMFGNTPIFGLDVWEHAYYLKYQNRRPEYIGAFYN-VIDWAEVERRYLEALK 203
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_THET8 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=sodA PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 53/187 (28.34%), Postives = 79/187 (42.25%), Query Frame = -1 Query: 289 AYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 843 AYV NLN + G +E ++ +A+ + NN NH FW I+ FG +FGSGWAWLV + L V+ TPN NP++ ++P++ IDVWEHAYYL +QNRR DY+ + +++W+ + + A Sbjct: 36 AYVTNLNAALEKYPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLV-----------------KDPFGKLHVLSTPNQDNPVMEGFTPIVGIDVWEHAYYLKYQNRRADYLQAIWN-VLNWDVAEEFFKKA 204
BLAST of CB290252 vs. ExPASy Swiss-Prot
Match: SODM_THET2 (Superoxide dismutase [Mn] OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=sodA PE=3 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.674e-15 Identity = 53/187 (28.34%), Postives = 79/187 (42.25%), Query Frame = -1 Query: 289 AYVDNLNKQIVGTELGDGKSLEDVV--IASYNKGDLLPAFNNAAQAWNHDFFWXXXXXXXXXXXXXXXXGLIERDFGSXXXXXXXXXXXXATQFGSGWAWLVYKXXXXXXXXXXXNPLPSEKDKSLLVVKTPNAVNPLVWDYSPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWESVSKRLESA 843 AYV NLN + G +E ++ +A+ + NN NH FW I+ FG +FGSGWAWLV + L V+ TPN NP++ ++P++ IDVWEHAYYL +QNRR DY+ + +++W+ + + A Sbjct: 36 AYVTNLNAALEKYPYLHGVEVEVLLRHLAALPQDIQTAVRNNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLV-----------------KDPFGKLHVLSTPNQDNPVMEGFTPIVGIDVWEHAYYLKYQNRRADYLQAIWN-VLNWDVAEEFFKKA 204 The following BLAST results are available for this feature:
BLAST of CB290252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 138
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Sequences
The
following sequences are available for this feature:
EST sequence >CB290252 ID=CB290252; Name=CB290252; organism=Citrus sinensis; type=EST; length=843bpback to top |