CB290255

Overview
NameCB290255
Unique NameCB290255
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length785
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290255 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.038e-63
Identity = 119/220 (54.09%), Postives = 153/220 (69.55%), Query Frame = 3
Query:  123 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLFEPNMV 782
            ++L + A  +  PGKGI+A DEST TI KR S + +EN E NRRA RELL  TP    Y+SG ILF+ET+ QKT  G PF   + + G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY  GARFAKWRAV+ IG + PS   I  NA+ LARYA +CQE GLVP+VEPE+++DG HDI  C +VTE  L + + AL + +V+LEGT+ + +MV
Sbjct:    4 EQLAETAQAMVAPGKGIIAIDESTSTIAKRFSGVGIENTEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDGVPFAKYMADHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANAHALARYAALCQEQGLVPMVEPEVIMDGDHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMV 223          
BLAST of CB290255 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.770e-63
Identity = 118/220 (53.64%), Postives = 156/220 (70.91%), Query Frame = 3
Query:  123 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLFEPNMV 782
            ++L + A  +   GKGI+A DES GTI KR SS+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ Q T AG PF   + E G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY+ GARFAKWRAV+ IG + PS + I+ N + LARYA +CQE GLVP+VEPE+++DG HDI+   +VTE  L + + AL + +V+LEGT+ + +MV
Sbjct:    4 EQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAGVPFPKYMAEHGIIPGIKVDKGAYPLAGCPGELVTEGLDGLRARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHALARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMV 223          
BLAST of CB290255 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 241.506 bits (615), Expect = 3.943e-63
Identity = 117/220 (53.18%), Postives = 156/220 (70.91%), Query Frame = 3
Query:  123 DELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLFEPNMV 782
            ++L + A  +   GKGI+A DES GTI KR SS+ +EN+E NRRA RELL  TP    Y+SG ILF+ET+ Q T AG PF   + + G++PGIKVDKG   LAG  GE  T+GLDGL  R ++YY+ GARFAKWRAV+ IG + PS + I+ N + LARYA +CQE GLVP+VEPE+++DG HDI+   +VTE  L + + AL + +V+LEGT+ + +MV
Sbjct:    4 EQLAETAQAMVASGKGIIAIDESAGTIAKRFSSVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQSTKAGVPFPKYMADHGIIPGIKVDKGAYPLAGCPGELVTEGLDGLRARLEEYYKLGARFAKWRAVINIGDDIPSGMCIDANVHALARYAALCQEQGLVPMVEPEVIMDGNHDISAAYEVTEATLRSLFNALYEQNVVLEGTILKASMV 223          
BLAST of CB290255 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 7.436e-62
Identity = 129/228 (56.58%), Postives = 158/228 (69.30%), Query Frame = 3
Query:  102 CFKGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLFEPNMVT 785
            C  GKY +ELIK A  + + G+GILA DES  T GKRL SI VEN E NRRA RELL   PG  QY+SG ILFEETLYQ TA+GK FVDV+KE  ++PGIKVDKG V    T   +   GLDG     + YY+AGARFAKWR+V+ I P+ PS + +   A GLARYA I Q  GLVPIVEPE+L+DG HDI++C +V E + A  +K + D+ V+L+G L +P MVT
Sbjct:   25 CAPGKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVP-CPTPTMSWCMGLDGWTSAAE-YYKAGARFAKWRSVVSI-PHGPS-IMLPRLAYGLARYAAIAQNAGLVPIVEPEVLLDGEHDIDRCLEVQEAIWAETFKYMADNKVMLQGILLKPAMVT 248          
BLAST of CB290255 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 6.976e-52
Identity = 110/226 (48.67%), Postives = 138/226 (61.06%), Query Frame = 3
Query:  108 KGKYADELIKNAAYIGTPGKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELA-GTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLFEPNMV 782
            K  Y  ELI+ A  +  PGKG+LAADESTG+  KR + I + N   +RR  R L+    G  QY+SGVIL +ET+YQK   G+ F   L+  GV+PGIK D G   L  G  GE  T GLDG  +R +KYY  G RF KWR V KI     S+  +  NA  LARYAI+ Q  GLVPIVEPE+++DG HDI  C  V++ V +    AL+ H V+ EG L +PNMV
Sbjct:   19 KTPYEAELIETAKKMTAPGKGLLAADESTGSCSKRFAGIGLSNTAEHRRQYRALMLECEGFEQYISGVILHDETVYQKAKTGETFPQYLRRRGVVPGIKTDCGLEPLVEGAKGEQMTAGLDGYIKRAKKYYAMGCRFCKWRNVYKIQNGTVSEAVVRFNAETLARYAILSQLCGLVPIVEPEVMIDGTHDIETCQRVSQHVWSEVVSALHRHGVVWEGCLLKPNMV 244          
BLAST of CB290255 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.837e-42
Identity = 90/208 (43.27%), Postives = 130/208 (62.50%), Query Frame = 3
Query:  162 GKGILAADESTGTIGKRLSSINVENVEANRRALRELLFCTPGALQYLSGVILFEETLYQKTAAGKPFVDVLKEGGVLPGIKVDKGTVELAGTNGETTTQGLDGLAQRCQKYYEAGARFAKWRAVLKIGPNEPSQLAINENANGLARYAIICQENGLVPIVEPEILVDGPHDINKCADVTERVLAACYKALNDHHVLLEGTLFEPNMVT 785
            GKGILAADE+  T+G+R   + + N E NRR  RE+LF T G  +Y+ GVIL +ET  Q + +G P  ++LK+ G+  GIK+DKG ++      E  + GL+ L  RC+      A FAKWR++       PS+  INEN + LA+YAIICQ+NGLVPIVEPE+ ++G + + +  +VT ++L+   K LN   V + G L + + VT
Sbjct:   21 GKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFSTKGIERYIGGVILNQETFEQTSGSGVPLTELLKKKGIEIGIKLDKGLIDYK--EKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCINENCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVT 226          
The following BLAST results are available for this feature:
BLAST of CB290255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALF1_XANCP1.038e-6354.09Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFT1.770e-6353.64Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFA3.943e-6353.18Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_CHLRE7.436e-6256.58Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_TRYBB6.976e-5248.67Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF_ENCCU3.837e-4243.27Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ad03_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ad03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290255 ID=CB290255; Name=CB290255; organism=Citrus sinensis; type=EST; length=785bp
GCCCTAGGCCAAAGCCACTCTCGTCTCTGCATAAAAATCGCTCTCTCTGT
TTCTCCCTCTAACAAAACAAATTTTCTATCTTCAAGTAGATCACCATGTC
TTGCTTCAAGGGCAAATACGCCGATGAGCTCATTAAAAACGCTGCCTACA
TTGGCACCCCTGGAAAGGGTATCCTTGCTGCTGATGAGTCAACAGGCACC
ATTGGCAAGCGTCTATCCAGCATCAATGTTGAGAATGTTGAGGCAAACAG
GCGTGCTCTCCGCGAGCTCCTTTTCTGCACTCCCGGTGCCCTTCAGTACC
TCAGTGGTGTCATCCTCTTCGAGGAGACCCTCTACCAGAAGACTGCTGCT
GGCAAGCCCTTTGTTGATGTCTTGAAGGAGGGTGGAGTCCTCCCTGGAAT
TAAGGTTGACAAGGGTACTGTTGAGCTTGCTGGTACCAATGGTGAGACCA
CCACCCAGGGTCTTGATGGCCTCGCCCAGCGCTGCCAGAAATACTATGAA
GCTGGTGCTCGTTTTGCCAAATGGCGTGCTGTTCTTAAGATTGGCCCTAA
TGAGCCTTCGCAGCTGGCCATCAATGAGAATGCCAATGGCCTGGCCCGAT
ATGCTATCATCTGCCAGGAGAATGGCCTTGTTCCCATTGTTGAACCTGAG
ATCCTTGTTGACGGTCCCCATGACATCAACAAGTGTGCTGATGTGACCGA
GCGTGTTCTTGCTGCATGCTACAAGGCTCTGAATGACCACCATGTCCTTC
TTGAGGGTACCCTTTTTGAGCCCAACATGGTGACC
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