CB290257

Overview
NameCB290257
Unique NameCB290257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CB290257 vs. ExPASy Swiss-Prot
Match: INV5_ARATH (Beta-fructofuranosidase, insoluble isoenzyme CWINV5 OS=Arabidopsis thaliana GN=CWINV5 PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.155e-17
Identity = 52/126 (41.27%), Postives = 70/126 (55.56%), Query Frame = -3 
Query:  417 LGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLK--TYFCTDQSRSSEANDVNKSKYGSFVPVLEGEKFSMRVLVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQM 788
            LGPFGL+VLA  ++ E T V   I +  + S +     C+DQS SS     +K+ YG+F+ +   +  S+R L+D SIVE F   G+T ITSRVYP  AI     +F FN  +      SL AW M
Sbjct:  443 LGPFGLMVLASKNMEEYTSVNIRIFRAGENSKEHVVVMCSDQSTSSLEKGNDKTTYGAFLDISPYQPISLRTLIDKSIVESFGGKGKTCITSRVYPKLAIGERTHLFAFNKGSQNVNVLSLSAWSM 568
The following BLAST results are available for this feature:
BLAST of CB290257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
INV5_ARATH1.155e-1741.27Beta-fructofuranosidase, insoluble isoenzyme CWINV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ad06_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ad06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290257 ID=CB290257; Name=CB290257; organism=Citrus sinensis; type=EST; length=799bp
TTTTTTTTTTTACAAAAAGCTAATTCCGATCTGAACATCACGAAATCAAG
AGAGCTGCAATTTTACATCTTTGGGAGGAATCACAATTCACAAATAAATT
CCTCTCCCAACTAGCAACGGTCGAATGACAAAATAACAAAATTAAGAGAC
TACTTTTTTTGTTGTCGAAGATTGGCACATCTTCTACAACTCGGGGGAGA
AAATTAACAAAGGAGGCCGGTGCCAAAGCTTTGAAATTTTGTTTGCAATA
AACATGTATTCTATAAAAAATTGTTGCGGGCGTTTAGAAATAACAAAGAA
CTCGTCAACAAATTGCCGAGATATTTAGTTTTGCTCCCTCTAACTTCATA
TGTTGGTTCCGTCCCCGAGTGCCGTTCATCATCATCATCCGGGTATGGAC
GGATGAATGCAAAATTCATTTGCCATGCTTTGAGTGAGCTTGTAACGCTG
GCGCCGGTAGCATTGTTGAACAAAAATACCCGAGCGGCTCCATAAATTGC
CTTTGTTGGATAAACCCTCGAAGTAATAGTTGTTCTCCCACCTTGAGCAA
AGCCTTCGACTATCGAATGATCCACCAATACTCTCATTGAGAATTTCTCG
CCTTCCAGTACTGGAACAAAGCTACCATATTTTGATTTATTGACATCATT
TGCCTCAGAAGATCTTGATTGATCAGTGCAGAAGTAAGTCTTGAGACTTC
CATCCTTTCCTTTCGCAATGTAGAAATAGACTGGAGTTTGCTCGGATAGG
CTGTCATCTGCAAGAACCAGAAGGCCAAAGGGGCCTAATGCTCCGCGTT
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