CB290258

Overview
NameCB290258
Unique NameCB290258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INV1_ORYSI (Beta-fructofuranosidase, insoluble isoenzyme 1 OS=Oryza sativa subsp. indica GN=CIN1 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.750e-38
Identity = 78/144 (54.17%), Postives = 98/144 (68.06%), Query Frame = 2
Query:  392 AGVSEKSNRRFGARTASYPWTNNMLS-WQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTG--STNESVQVQNLAYPADPSDPL 814
            AG S   +R   A  A      +++S   RT +HFQP  NW+NDPNGP++YKGWYHLFYQYNP GA+WG+IVW H+VS+DLI+W  L  A+  D   D  G W+GSATILPDG   +LYTG    N + QVQN+A+P + SDPL
Sbjct:   20 AGASHVVHRSLEAEQAPSSVPASIVSPLLRTGYHFQPPMNWINDPNGPLYYKGWYHLFYQYNPKGAVWGNIVWAHSVSQDLINWIALEPAIKPDIPSDQYGCWSGSATILPDGTPAILYTGIDRPNINYQVQNIAFPKNASDPL 163          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INV3_DAUCA (Beta-fructofuranosidase, insoluble isoenzyme 3 OS=Daucus carota GN=INV3 PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.045e-37
Identity = 70/115 (60.87%), Postives = 89/115 (77.39%), Query Frame = 2
Query:  476 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTN---ESVQVQNLAYPADPSDP 811
            RT +HFQPQK+W+NDPNGP+FYKG+YHLFYQYNP G++WG+IVW H+VSKDLI+W  L  A+   + +D  G W+GSATILP  K ++LYTG  +   E+ QVQN A PA+ SDP
Sbjct:   54 RTGYHFQPQKHWINDPNGPMFYKGYYHLFYQYNPKGSVWGNIVWAHSVSKDLINWIALEPAIFPSKPFDQYGCWSGSATILPGNKPVILYTGIVSPDPENAQVQNYAVPANYSDP 168          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INV1_PEA (Beta-fructofuranosidase, cell wall isozyme OS=Pisum sativum GN=BFRUCT1 PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.365e-37
Identity = 71/113 (62.83%), Postives = 86/113 (76.11%), Query Frame = 2
Query:  476 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPL 814
            RTA+HFQP KNW+NDPNGP+ Y G+YHLFYQYNP GA+WG+IVW H+VSKDL++W  L  A+   Q  DI G W+GSATILP GK  +LYTG    + QVQN+A P + SDPL
Sbjct:   47 RTAYHFQPLKNWINDPNGPMRYGGFYHLFYQYNPKGAVWGNIVWAHSVSKDLVNWTPLDHAIHPSQPSDIKGCWSGSATILPGGKPAILYTGIDPNNHQVQNIAIPKNMSDPL 159          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INV4_ARATH (Beta-fructofuranosidase, insoluble isoenzyme CWINV4 OS=Arabidopsis thaliana GN=CWINV4 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.782e-37
Identity = 65/112 (58.04%), Postives = 83/112 (74.11%), Query Frame = 2
Query:  476 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDP 811
            R +FHFQP K+W+NDPNGPV+YKG YHLFYQYN  GA+WG+I+W H+VSKDL++W  L  A+   +W+DI G W+GS TI+P    ++LYTG      Q+QN A P DPSDP
Sbjct:   50 RPSFHFQPPKHWINDPNGPVYYKGLYHLFYQYNTKGAVWGNIIWAHSVSKDLVNWEALEPALSPSKWFDIGGTWSGSITIVPGKGPIILYTGVNQNETQLQNYAIPEDPSDP 161          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INV1_ARATH (Beta-fructofuranosidase, insoluble isoenzyme CWINV1 OS=Arabidopsis thaliana GN=CWINV1 PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.971e-37
Identity = 69/112 (61.61%), Postives = 85/112 (75.89%), Query Frame = 2
Query:  476 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDP 811
            RT FHFQP KNWMNDPNGP+ YKG YHLFYQ+NP GA+WG+IVW H+ S DLI+W   P A+     +DI G W+GSATILP+GK ++LYTG   ++ QVQN+A P + SDP
Sbjct:   52 RTGFHFQPPKNWMNDPNGPMIYKGIYHLFYQWNPKGAVWGNIVWAHSTSTDLINWDPHPPAIFPSAPFDINGCWSGSATILPNGKPVILYTGIDPKNQQVQNIAEPKNLSDP 163          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INV2_DAUCA (Beta-fructofuranosidase, insoluble isoenzyme 2 OS=Daucus carota GN=INV2 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.186e-37
Identity = 67/115 (58.26%), Postives = 88/115 (76.52%), Query Frame = 2
Query:  476 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNES---VQVQNLAYPADPSDP 811
            RT +HFQP+K+W+NDPNGP++YKG+YHLFYQYNP GA+WG+IVW H++SKDLI+W  L  A+   + +D  G W+GSAT+LP GK +++YTG    S    QVQN A PA+ SDP
Sbjct:   61 RTGYHFQPKKHWINDPNGPMYYKGFYHLFYQYNPKGAVWGNIVWAHSISKDLINWVALEPAIFPSKPFDKYGCWSGSATVLPGGKPVIMYTGIVTPSPVNTQVQNFAVPANYSDP 175          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INV2_ARATH (Beta-fructofuranosidase, insoluble isoenzyme CWINV2 OS=Arabidopsis thaliana GN=CWINV2 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.186e-37
Identity = 66/112 (58.93%), Postives = 83/112 (74.11%), Query Frame = 2
Query:  476 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDP 811
            RTA+HFQP ++W+NDPN P+ YKG YHLFYQYNP GA+WG+IVW H+VSKDLI+W  L  A+   +W+DI G W+GSAT +P    ++LYTG T    Q+QN A P D SDP
Sbjct:   48 RTAYHFQPPRHWINDPNAPMLYKGVYHLFYQYNPKGAVWGNIVWAHSVSKDLINWEALEPAIYPSKWFDINGTWSGSATHVPGKGPVILYTGITENQTQIQNYAIPQDLSDP 159          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INVA_MAIZE (Beta-fructofuranosidase, cell wall isozyme OS=Zea mays PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.277e-35
Identity = 74/143 (51.75%), Postives = 90/143 (62.94%), Query Frame = 2
Query:  392 AGVSEKSNRRFGARTASYPWTNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESV--QVQNLAYPADPSDPL 814
            AG S   +R   A  A     + +    RT +HFQP  NW+NDPN P++YKGWYHLFYQYNP GA+WG+IVW H+VS+DLI+W  L  A+      D  G W+GSATIL DG   +LYTG     +  QVQ LA P D SDPL
Sbjct:   26 AGASHVIHRSLEAEAAPSVPASIVSPLLRTGYHFQPPMNWINDPNAPLYYKGWYHLFYQYNPKGAVWGNIVWAHSVSRDLINWVALEPAIYPSIPSDKYGCWSGSATILEDGTPAILYTGIDRADINYQVQVLALPKDASDPL 168          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INV4_ORYSJ (Beta-fructofuranosidase, insoluble isoenzyme 4 OS=Oryza sativa subsp. japonica GN=CIN4 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.277e-35
Identity = 65/112 (58.04%), Postives = 83/112 (74.11%), Query Frame = 2
Query:  476 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDP 811
            RT +HFQP KNW+NDPNGP++Y G YH FYQYNPNG++WG+IVWGH+VS DLI+W  L  A+  +   DI G WTGSATIL   + +++YTG+  E  QVQN+  P + SDP
Sbjct:   60 RTGYHFQPPKNWINDPNGPMYYNGIYHEFYQYNPNGSVWGNIVWGHSVSTDLINWIRLEPAIEGNTPSDINGCWTGSATILTGDQPVIIYTGADTEKRQVQNIVLPKNRSDP 171          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INV2_ORYSJ (Beta-fructofuranosidase, insoluble isoenzyme 2 OS=Oryza sativa subsp. japonica GN=CIN2 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.668e-35
Identity = 66/115 (57.39%), Postives = 84/115 (73.04%), Query Frame = 2
Query:  476 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESV--QVQNLAYPADPSDPL 814
            RT +HFQP KNW+NDPN P++YKGWYHLFYQYNP GA+WG+IVW H+VS+DLI+W  L  A+      D  G W+GSAT++ DG  +++YTG     V  QVQN+A P + SDPL
Sbjct:   55 RTGYHFQPPKNWINDPNAPMYYKGWYHLFYQYNPKGAVWGNIVWAHSVSRDLINWVALKPAIEPSIRADKYGCWSGSATMMADGTPVIMYTGVNRPDVNYQVQNVALPRNGSDPL 169          
The following BLAST results are available for this feature:
BLAST of CB290258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
INV1_ORYSI2.750e-3854.17Beta-fructofuranosidase, insoluble isoenzyme 1 OS=... [more]
INV3_DAUCA1.045e-3760.87Beta-fructofuranosidase, insoluble isoenzyme 3 OS=... [more]
INV1_PEA1.365e-3762.83Beta-fructofuranosidase, cell wall isozyme OS=Pisu... [more]
INV4_ARATH1.782e-3758.04Beta-fructofuranosidase, insoluble isoenzyme CWINV... [more]
INV1_ARATH3.971e-3761.61Beta-fructofuranosidase, insoluble isoenzyme CWINV... [more]
INV2_DAUCA5.186e-3758.26Beta-fructofuranosidase, insoluble isoenzyme 2 OS=... [more]
INV2_ARATH5.186e-3758.93Beta-fructofuranosidase, insoluble isoenzyme CWINV... [more]
INVA_MAIZE1.277e-3551.75Beta-fructofuranosidase, cell wall isozyme OS=Zea ... [more]
INV4_ORYSJ1.277e-3558.04Beta-fructofuranosidase, insoluble isoenzyme 4 OS=... [more]
INV2_ORYSJ1.668e-3557.39Beta-fructofuranosidase, insoluble isoenzyme 2 OS=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS01_01ad06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ad06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290258 ID=CB290258; Name=CB290258; organism=Citrus sinensis; type=EST; length=815bp
GCCCGTGGTTTGTTGTATAAATAGACCCCCGGTTCTCTTAACCTTTCTCC
CCATTATTCATTGAAACCAACAAATTTATCAAGCAGCAGCCCTCTAGTGC
GCCGCATACATTCGTTAATCAATGGCAGATTCTAATGTATCCTACAATCC
TCTCCCGGACGGGGAACGTCCGCGGCCAACTCGCCGGAGATCCATCGTCT
TGGTTCTATCCGGTTTGTTGGTCGTTGGTTTTTTAGTTGCATTATTATCC
GATAATGGATCTATAGCCCCTACTAACGTTATTGATAATGACAATAATAA
TGTTAATGATAATGCACAAAATGGGCTTAATGATGTGTCGTCGTCGTCGA
AAGACCCCGAGAGACTCCGGCCGTTTACGAGTGCCTCGTCGGCCGGGGTG
TCTGAGAAGTCGAACCGGCGGTTTGGTGCAAGGACGGCGTCGTATCCCTG
GACCAATAATATGCTGTCGTGGCAAAGGACGGCCTTCCACTTTCAACCCC
AAAAGAATTGGATGAATGATCCTAATGGTCCAGTGTTTTACAAAGGATGG
TACCATTTGTTCTACCAGTACAACCCAAATGGCGCAATATGGGGTGACAT
AGTGTGGGGGCATGCTGTGTCAAAGGACCTGATCCATTGGTATCACCTCC
CGTTGGCCATGGTTGCCGATCAATGGTATGATATTATGGGTGTCTGGACC
GGCTCTGCTACAATCCTACCTGATGGAAAACTTATGATGTTGTACACTGG
ATCCACCAACGAGTCTGTGCAGGTCCAAAATCTCGCATATCCTGCCGACC
CATCTGATCCTCTAC
back to top