CB290258

Overview
NameCB290258
Unique NameCB290258
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INV5_ORYSJ (Beta-fructofuranosidase, insoluble isoenzyme 5 OS=Oryza sativa subsp. japonica GN=CIN5 PE=2 SV=3)

HSP 1 Score: 134.42 bits (337), Expect = 7.253e-31
Identity = 59/115 (51.30%), Postives = 79/115 (68.70%), Query Frame = 2
Query:  476 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIW--GDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPL 814
            RTA+HFQP K W NDPNGP+++ G YH FYQYNP+G +W  G + WGH+VS DL++W  L  A+     +D+ G W+GSAT+L  G+   LYTG     VQVQN+++  +P DPL
Sbjct:   39 RTAYHFQPAKFWQNDPNGPLYHNGLYHFFYQYNPHGPLWDTGKLSWGHSVSGDLVNWAFLGTAIDPTDPFDVNGCWSGSATVLLGGRPAFLYTGRDAGGVQVQNVSFAKNPLDPL 153          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: BFRA_THEMA (Beta-fructosidase OS=Thermotoga maritima GN=bfrA PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.855e-24
Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 2
Query:  485 FHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYT 748
            +HF P   WMNDPNG +F+KG YH+FYQYNP    WG+I WGHAVS DL+HW HLP+A+  D   +  GV++GSA +  DGK+ ++YT
Sbjct:    6 YHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWRHLPVALYPDD--ETHGVFSGSA-VEKDGKMFLVYT 90          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: SACC_BACSU (Levanase OS=Bacillus subtilis GN=sacC PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.263e-23
Identity = 57/118 (48.31%), Postives = 73/118 (61.86%), Query Frame = 2
Query:  476 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATI-------LPDGK---LMMLYTGSTNESVQVQNLAYPAD 799
            R  +HF P+ NWMNDPNG V+Y G YHLFYQY+P G  WG + WGHAVSKDL+ W HLP+A+  D+   I   ++GSA +          GK   L+ +YT    E  QVQ++AY  D
Sbjct:   35 RPQYHFTPEANWMNDPNGMVYYAGEYHLFYQYHPYGLQWGPMHWGHAVSKDLVTWEHLPVALYPDEKGTI---FSGSAVVDKNNTSGFQTGKEKPLVAIYT-QDREGHQVQSIAYSND 148          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: SCR_ZYMMO (Sucrose-6-phosphate hydrolase OS=Zymomonas mobilis GN=sacA PE=1 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.791e-21
Identity = 49/117 (41.88%), Postives = 68/117 (58.12%), Query Frame = 2
Query:  401 SEKSNRRFGARTASYPWTNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTG 751
            +E + ++ G R  S  W           FH  P   WMNDPNG +F+KG YHLFYQY P   +WG + WGHA S+DL+HW  LP+A+     +D  G ++G A +  +G L ++YTG
Sbjct:   12 AEDAQKKAGKRLLSSEWY--------PGFHVTPLTGWMNDPNGLIFFKGEYHLFYQYYPFAPVWGPMHWGHAKSRDLVHWETLPVALAPGDSFDRDGCFSGCA-VDNNGVLTLIYTG 119          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: RAFD_ECOLX (Raffinose invertase OS=Escherichia coli GN=rafD PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 2
Query:  485 FHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTG 751
            FH  P   WMNDPNG +++ G YH F+Q++P  A  G + WGHA S D++HW H  +A+     YD  G ++GSA +  DG L ++YTG
Sbjct:   27 FHLAPPAGWMNDPNGLIYFNGRYHAFFQHHPASAYQGPMHWGHATSTDMLHWQHELVALAPGDKYDRDGCFSGSA-VDDDGVLSLIYTG 114          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: CSCA_ECOLX (Sucrose-6-phosphate hydrolase OS=Escherichia coli GN=cscA PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.128e-18
Identity = 40/89 (44.94%), Postives = 55/89 (61.80%), Query Frame = 2
Query:  485 FHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTG 751
            FH  P   WMNDPNG +++   YH FYQ++P    WG + WGHA S D+IHW H P+A+      D  G ++GSA +  +G L ++YTG
Sbjct:   28 FHLAPPAGWMNDPNGLIWFNDRYHAFYQHHPMSEHWGPMHWGHATSDDMIHWQHEPIALAPGDENDKDGCFSGSA-VDDNGVLSLIYTG 115          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: SCRB_PSYIN (Probable sucrose-6-phosphate hydrolase OS=Psychromonas ingrahamii (strain 37) GN=Ping_0974 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17
Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 2
Query:  446 PWTNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGS 754
            P+T  +    R  +H  P +  +NDPNG ++++G YHLFYQ+ P   +  D  W H  SKDL++W   P+A+    W+D  GV++G A I  D  LM+ YTG+
Sbjct:   86 PYTAPVECEFRPDWHISPPQGLLNDPNGFIYHQGQYHLFYQWYPYTCVHKDKYWAHLTSKDLVNWQWQPVALTPSDWFDSYGVFSGHA-ISQDDLLMLFYTGN 187          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INV1_SCHPO (Invertase OS=Schizosaccharomyces pombe GN=inv1 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.017e-16
Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 2
Query:  476 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYD--IMGVWTGSATI-------------LPDGKLMMLYTGSTNESVQVQNLAYPAD 799
            R   HF P   +MNDPNG V+  G YH+F+QY+P     G++ WGH VSKDLIHW + P+A+  D+  +  +   ++GSA +             +P+ +++++YT       + Q +AY  D
Sbjct:   83 RPKIHFTPSSGFMNDPNGLVYTGGVYHMFFQYSPKTLTAGEVHWGHTVSKDLIHWENYPIAIYPDEHENGVLSLPFSGSAVVDVHNSSGLFSNDTIPEERIVLIYTDHWTGVAERQAIAYTTD 205          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INU2_ASPFI (Inulinase OS=Aspergillus ficuum GN=inu2 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.017e-16
Identity = 45/119 (37.82%), Postives = 68/119 (57.14%), Query Frame = 2
Query:  476 RTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDG----------KLMMLYTG-STNESVQVQNLAYPAD 799
            R ++HF P + WMN+PNG +     +HLF+Q+NP   +WG+I WGHA S DL+HW H P A +AD+  + +  +TG+A   P+             +  +TG +T+   Q Q LA+  D
Sbjct:   29 RPSYHFTPDQYWMNEPNGLIKIGSTWHLFFQHNPTANVWGNICWGHATSTDLMHWAHKPTA-IADE--NGVEAFTGTAYYDPNNTSGLGDSANPPYLAWFTGYTTSSQTQDQRLAFSVD 144          
BLAST of CB290258 vs. ExPASy Swiss-Prot
Match: INV_DEBOC (Invertase OS=Debaryomyces occidentalis GN=INV PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.046e-16
Identity = 47/128 (36.72%), Postives = 74/128 (57.81%), Query Frame = 2
Query:  470 WQRTAFHFQPQKNWMNDPNGPVFY----KGWYHLFYQYNPNGAIWGD-IVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGS-------------ATILPDGKLMMLYTGSTNESVQVQNLAYPAD 799
            + R   HF P+K WMNDPNG +FY    K W HL++QYNPN   WG  + WGHA S DL+HW    +A+  +  +D  G+++GS             ++I P+ +++ +YT +  + +Q Q++A+  D
Sbjct:   34 YNRPLIHFTPEKGWMNDPNG-LFYDKTAKLW-HLYFQYNPNATAWGQPLYWGHATSNDLVHWDEHEIAIGPE--HDNEGIFSGSIVVDHNNTSGFFNSSIDPNQRIVAIYTNNIPD-LQTQDIAFSLD 156          
The following BLAST results are available for this feature:
BLAST of CB290258 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
INV5_ORYSJ7.253e-3151.30Beta-fructofuranosidase, insoluble isoenzyme 5 OS=... [more]
BFRA_THEMA3.855e-2455.68Beta-fructosidase OS=Thermotoga maritima GN=bfrA P... [more]
SACC_BACSU3.263e-2348.31Levanase OS=Bacillus subtilis GN=sacC PE=1 SV=1[more]
SCR_ZYMMO1.791e-2141.88Sucrose-6-phosphate hydrolase OS=Zymomonas mobilis... [more]
RAFD_ECOLX4.128e-1844.94Raffinose invertase OS=Escherichia coli GN=rafD PE... [more]
CSCA_ECOLX4.128e-1844.94Sucrose-6-phosphate hydrolase OS=Escherichia coli ... [more]
SCRB_PSYIN2.676e-1739.81Probable sucrose-6-phosphate hydrolase OS=Psychrom... [more]
INV1_SCHPO1.017e-1634.96Invertase OS=Schizosaccharomyces pombe GN=inv1 PE=... [more]
INU2_ASPFI1.017e-1637.82Inulinase OS=Aspergillus ficuum GN=inu2 PE=3 SV=1[more]
INV_DEBOC5.046e-1636.72Invertase OS=Debaryomyces occidentalis GN=INV PE=3... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS01_01ad06_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_01ad06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CB290258 ID=CB290258; Name=CB290258; organism=Citrus sinensis; type=EST; length=815bp
GCCCGTGGTTTGTTGTATAAATAGACCCCCGGTTCTCTTAACCTTTCTCC
CCATTATTCATTGAAACCAACAAATTTATCAAGCAGCAGCCCTCTAGTGC
GCCGCATACATTCGTTAATCAATGGCAGATTCTAATGTATCCTACAATCC
TCTCCCGGACGGGGAACGTCCGCGGCCAACTCGCCGGAGATCCATCGTCT
TGGTTCTATCCGGTTTGTTGGTCGTTGGTTTTTTAGTTGCATTATTATCC
GATAATGGATCTATAGCCCCTACTAACGTTATTGATAATGACAATAATAA
TGTTAATGATAATGCACAAAATGGGCTTAATGATGTGTCGTCGTCGTCGA
AAGACCCCGAGAGACTCCGGCCGTTTACGAGTGCCTCGTCGGCCGGGGTG
TCTGAGAAGTCGAACCGGCGGTTTGGTGCAAGGACGGCGTCGTATCCCTG
GACCAATAATATGCTGTCGTGGCAAAGGACGGCCTTCCACTTTCAACCCC
AAAAGAATTGGATGAATGATCCTAATGGTCCAGTGTTTTACAAAGGATGG
TACCATTTGTTCTACCAGTACAACCCAAATGGCGCAATATGGGGTGACAT
AGTGTGGGGGCATGCTGTGTCAAAGGACCTGATCCATTGGTATCACCTCC
CGTTGGCCATGGTTGCCGATCAATGGTATGATATTATGGGTGTCTGGACC
GGCTCTGCTACAATCCTACCTGATGGAAAACTTATGATGTTGTACACTGG
ATCCACCAACGAGTCTGTGCAGGTCCAAAATCTCGCATATCCTGCCGACC
CATCTGATCCTCTAC
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